prot_Ecto-sp13_S_contig1015.176.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1015.176.1
Unique Name	prot_Ecto-sp13_S_contig1015.176.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	249

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Match: D7G1U0_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U0_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.970e-89
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0

Query:  104 MASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRRVITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMAGFFGGEGFVLQRLTGKGDAFVKA 249
            MASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRR VITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMAGFFGGEGFVLQRLTGKGDAFVKA
Sbjct:    1 MASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRR-VITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMAGFFGGEGFVLQRLTGKGDAFVKA 145

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BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Match: A0A1Z5KFL0_FISSO (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFL0_FISSO)

HSP 1 Score: 191 bits (486), Expect = 1.840e-56
Identity = 95/171 (55.56%), Postives = 130/171 (76.02%), Query Frame = 0

Query:   80 TGVSNAPAATEQDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRRVITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGKGDAFVKA 249
            T  S  P  T  D + + +P+DFD+A+K+EG ESQ+VT EL P QV+RAE+G ++++ +G+EM+T TGGG S+ FRR ++TGQN F++DY   G+  G+V LGTD PSKI+RL +  YGG+++CQ+GA L  SHTID+Q EFTK   +GFFGGEGF+LQ LTG+GD F+KA
Sbjct:   29 TFASQTPTLTSVDGV-VGEPIDFDLAAKIEGNESQIVTIELRPNQVLRAESGAMMYLTEGVEMNTTTGGGLSAGFRR-MMTGQNFFISDYTYTGNTVGRVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDVQMEFTKSFTSGFFGGEGFILQALTGEGDVFLKA 197

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BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Match: A0A7S4QQK5_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQK5_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.350e-54
Identity = 96/164 (58.54%), Postives = 125/164 (76.22%), Query Frame = 0

Query:   89 TEQDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRRVITGQNMFVTDYVNRGDAS--GKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGKGDAFVKA 249
            T  D +    P++FD+ASK+EG+ESQ+VT  +EPGQV+RAE+G L++M DGIEM+T +GGG S+ F+R ++TGQN+F++DY   G++   G V LGTD PSKI+RL    YGG+++CQ+GA L  SHTIDI+ EF K   AGFFGGEGFVLQ LTG GD FVKA
Sbjct:   95 TSSDGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKR-LLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIEMEFAKKFTAGFFGGEGFVLQALTGDGDVFVKA 257

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BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Match: A0A7S4QQY9_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQY9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.780e-54
Identity = 96/164 (58.54%), Postives = 125/164 (76.22%), Query Frame = 0

Query:   89 TEQDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRRVITGQNMFVTDYVNRGDAS--GKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGKGDAFVKA 249
            T  D +    P++FD+ASK+EG+ESQ+VT  +EPGQV+RAE+G L++M DGIEM+T +GGG S+ F+R ++TGQN+F++DY   G++   G V LGTD PSKI+RL    YGG+++CQ+GA L  SHTIDI+ EF K   AGFFGGEGFVLQ LTG GD FVKA
Sbjct:   95 TSSDGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKR-LLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIEMEFAKKFTAGFFGGEGFVLQALTGDGDVFVKA 257

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BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Match: A0A4D9D418_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D418_9STRA)

HSP 1 Score: 187 bits (475), Expect = 4.990e-54
Identity = 94/162 (58.02%), Postives = 128/162 (79.01%), Query Frame = 0

Query:   91 QDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRRVITGQNMFVTDYVNRGD--ASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGKGDAFVKA 249
            +D  ALAKP+DFD+AS+VEG E+Q+V  +LEPGQV+RAE G+L++M DG+E++T+ GGG S+  +R  +TG+NMF++D+   G   +SG V LGT+ PSKI+R+ LA YGG +ICQ+GAFL G+H   ++ EFT+   +GFFGGEGFVLQRLTG GDAF+KA
Sbjct:   17 EDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKR-YMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKSGFFGGEGFVLQRLTGGGDAFIKA 177

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BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Match: A0A7S1VUA2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VUA2_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.040e-53
Identity = 95/154 (61.69%), Postives = 122/154 (79.22%), Query Frame = 0

Query:   98 KPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRRVITGQNMFVTDYV-NRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTK-MMAGFFGGEGFVLQRLTGKGDAFVKA 249
            +P++FD+A+K+EG ESQ+VT  LEP QV+RAE+G ++FM DG+EM+T TGGG S+ F+R ++TGQN F++DYV NR    G+V LGTD PSKIVRL +A YGG++ CQ+GA L  SHTIDI+  FTK   AGFFG EGFVLQ L+G+GD FVKA
Sbjct:  118 RPINFDVAAKIEGNESQIVTVTLEPNQVLRAESGAMMFMTDGVEMNTTTGGGLSTGFQR-MLTGQNFFISDYVYNRPTGKGQVALGTDFPSKIVRLNVAEYGGKITCQKGALLCASHTIDIEMAFTKNFSAGFFGSEGFVLQALSGQGDVFVKA 270

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BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Match: A0A7S2WLF3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLF3_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.090e-53
Identity = 89/151 (58.94%), Postives = 120/151 (79.47%), Query Frame = 0

Query:  100 LDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRRVITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMA-GFFGGEGFVLQRLTGKGDAFVKA 249
            +DF+ AS++EG +SQ+VT  LEPGQV+RAE+G +++M DG+EM+T+TGGG  + F+R  +TGQN+F++DY  +GD  G V LGTD PSKI+RL L  + G+++CQ+GA L  SHT+DI+TEFTK  + GFFGGEGFVLQ L G+GD FVKA
Sbjct:   49 IDFNTASRIEGSDSQIVTVRLEPGQVLRAESGGMMYMTDGVEMNTSTGGGVGAGFKR-FLTGQNVFISDYTYKGDRFGIVALGTDFPSKIMRLSLPEWDGKIVCQKGALLCASHTVDIETEFTKKFSTGFFGGEGFVLQALLGEGDVFVKA 198

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BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Match: W7T4F9_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4F9_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.180e-53
Identity = 94/162 (58.02%), Postives = 127/162 (78.40%), Query Frame = 0

Query:   91 QDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRRVITGQNMFVTDYVNRGD--ASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGKGDAFVKA 249
            +D  ALAKP+DFD+AS+VEG E+Q+V  +LEPGQV+RAE G+L++M DG+E++T+ GGG S+  +R  +TG+NMF++D+   G   +SG V LGT+ PSKI+R+ LA YGG +ICQ+GAFL G+H   ++ EFT+    GFFGGEGFVLQRLTG GDAF+KA
Sbjct:   74 EDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKR-YMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKA 234

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BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Match: A0A7S0C9P2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=6 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9P2_9STRA)

HSP 1 Score: 182 bits (463), Expect = 4.780e-53
Identity = 96/166 (57.83%), Postives = 126/166 (75.90%), Query Frame = 0

Query:   87 AATEQDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRRVITGQNMFVTDYVNRGD--ASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGKGDAFVKA 249
            AAT  D + +  P+DFD++SK+EG ESQ+VT ELEP QV+RAE+G +++M +G+ M+T TGGG S+ F+R ++TGQN F++DY   G+    G V LGTD PSKI+RL +  YGG+++CQ+GA L  SHTI+I+ EF K M AGFFGGEGFVLQ LTG GD FVKA
Sbjct:   25 AATSADGV-VGLPIDFDVSSKIEGNESQIVTIELEPNQVLRAESGAMMYMTEGVTMETTTGGGMSAGFKR-MMTGQNAFISDYRYDGEPGTKGLVALGTDFPSKIIRLDVKDYGGKIVCQKGALLCASHTINIEMEFAKKMTAGFFGGEGFVLQSLTGDGDVFVKA 188

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BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Match: A0A7S3L252_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L252_9STRA)

HSP 1 Score: 183 bits (464), Expect = 7.230e-53
Identity = 93/154 (60.39%), Postives = 121/154 (78.57%), Query Frame = 0

Query:   98 KPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRRVITGQNMFVTDYVNRGDA-SGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMA-GFFGGEGFVLQRLTGKGDAFVKA 249
            +P+DFD+ SK+EG ESQ+VT  LEPGQV+RAE+G +++M  G+EM+T TGGG SS F R ++TGQN F++DY  +G+  +G+V LGTD PSKI+RL +  YGG+++CQ+GA L  SHTIDI  EF+K  + GFFGGEGFVLQ LTG GD FVKA
Sbjct:   70 RPIDFDIQSKIEGNESQIVTITLEPGQVLRAESGAMMYMTAGVEMNTTTGGGLSSGFSR-MLTGQNFFISDYSYQGETGTGQVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDIAMEFSKNFSTGFFGGEGFVLQALTGDGDVFVKA 222

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1015.176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G1U0_ECTSI	1.970e-89	99.32	Altered inheritance of mitochondria protein 24, mi...	[more]
A0A1Z5KFL0_FISSO	1.840e-56	55.56	Altered inheritance of mitochondria protein 24, mi...	[more]
A0A7S4QQK5_9STRA	1.350e-54	58.54	Altered inheritance of mitochondria protein 24, mi...	[more]
A0A7S4QQY9_9STRA	3.780e-54	58.54	Altered inheritance of mitochondria protein 24, mi...	[more]
A0A4D9D418_9STRA	4.990e-54	58.02	Altered inheritance of mitochondria protein 24, mi...	[more]
A0A7S1VUA2_9STRA	1.040e-53	61.69	Altered inheritance of mitochondria protein 24, mi...	[more]
A0A7S2WLF3_9STRA	1.090e-53	58.94	Altered inheritance of mitochondria protein 24, mi...	[more]
W7T4F9_9STRA	1.180e-53	58.02	Altered inheritance of mitochondria protein 24, mi...	[more]
A0A7S0C9P2_9STRA	4.780e-53	57.83	Altered inheritance of mitochondria protein 24, mi...	[more]
A0A7S3L252_9STRA	7.230e-53	60.39	Altered inheritance of mitochondria protein 24, mi...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002838	Mitochondrial biogenesis protein AIM24	PFAM	PF01987	AIM24	coord: 107..249 e-value: 1.3E-34 score: 119.8
IPR036983	Mitochondrial biogenesis AIM24 superfamily	GENE3D	3.60.160.10		coord: 101..249 e-value: 4.8E-44 score: 152.2
None	No IPR available	PANTHER	PTHR43657	FAMILY NOT NAMED	coord: 93..249
IPR016031	Tryptophan RNA-binding attenuator protein-like domain superfamily	SUPERFAMILY	51219	TRAP-like	coord: 105..248

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1015	contig	Ecto-sp13_S_contig1015:22..2901 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1015.176.1	mRNA_Ecto-sp13_S_contig1015.176.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1015 22..2901 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1015.176.1 ID=prot_Ecto-sp13_S_contig1015.176.1|Name=mRNA_Ecto-sp13_S_contig1015.176.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=249bp
MTCRGLAASARRLAVLRRGNGFTSVLAVGGSVAPPAANPPAFSAIASGER
ATTTTVFSRKSSSSSRNNRRSSDGAEFAATGVSNAPAATEQDHLALAKPL
DFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGA
SSMFRRRVITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGE
VICQRGAFLAGSHTIDIQTEFTKMMAGFFGGEGFVLQRLTGKGDAFVKA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002838	AIM24
IPR036983	AIM24_sf
IPR016031	Trp_RNA-bd_attenuator-like_dom