prot_Ecto-sp13_S_contig12078.1764.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12078.1764.1
Unique Nameprot_Ecto-sp13_S_contig12078.1764.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12078.1764.1 vs. uniprot
Match: A0A6H5K7N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N9_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 4.170e-56
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0 
Query:    1 MSALPVNQNYPGEAPPPYYQQQAAVPGQDMARCKGCGQQFVRRPGENPASAQWHRCENCNKRQTRDMLLVNATCGASSLCSIQ 83
            MSALPVN+NYPGEAPPPYYQQQAAVPGQDMARCKGCGQQFVR+PGENPASAQWHRCENCNKRQTRDMLLVNATCGASSLCSIQ
Sbjct:    1 MSALPVNENYPGEAPPPYYQQQAAVPGQDMARCKGCGQQFVRKPGENPASAQWHRCENCNKRQTRDMLLVNATCGASSLCSIQ 83
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BLAST of mRNA_Ecto-sp13_S_contig12078.1764.1 vs. uniprot
Match: A0A8J5X8X5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8X5_DIALT)

HSP 1 Score: 52.0 bits (123), Expect = 1.900e-6
Identity = 19/27 (70.37%), Postives = 23/27 (85.19%), Query Frame = 0 
Query:   33 CKGCGQQFVRRPGENPASAQWHRCENC 59
            C+GCG+QFVRRPG  P +AQW+RCE C
Sbjct:   99 CRGCGRQFVRRPGVRPNTAQWYRCEEC 125
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12078.1764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K7N9_9PHAE4.170e-5697.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J5X8X5_DIALT1.900e-670.37Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12078contigEcto-sp13_S_contig12078:1145..3840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12078.1764.1mRNA_Ecto-sp13_S_contig12078.1764.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12078 1145..3840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12078.1764.1 ID=prot_Ecto-sp13_S_contig12078.1764.1|Name=mRNA_Ecto-sp13_S_contig12078.1764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
MSALPVNQNYPGEAPPPYYQQQAAVPGQDMARCKGCGQQFVRRPGENPAS
AQWHRCENCNKRQTRDMLLVNATCGASSLCSIQ*
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