mRNA_Ecto-sp13_S_contig67152.17610.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig67152.17610.1 vs. uniprot
Match: A0A6H5KEM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEM1_9PHAE) HSP 1 Score: 128 bits (322), Expect = 2.670e-33 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1
Query: 13 GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY 195
GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY
Sbjct: 158 GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY 218
BLAST of mRNA_Ecto-sp13_S_contig67152.17610.1 vs. uniprot
Match: D7FP64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP64_ECTSI) HSP 1 Score: 128 bits (322), Expect = 4.360e-33 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1
Query: 13 GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY 195
GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY
Sbjct: 307 GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY 367
BLAST of mRNA_Ecto-sp13_S_contig67152.17610.1 vs. uniprot
Match: A0A7S4D4K1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4K1_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 2.410e-17 Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 13 GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY 195
G HTDTTF+T+IPC++ PGLE+ P+ WVRPE + CRPG D+++L GELLQV G Y
Sbjct: 9 GAHTDTTFVTLIPCSNIPGLEVFSPALDGWVRPEPA--CRPGRDIIILPGELLQVLSAGHY 67
BLAST of mRNA_Ecto-sp13_S_contig67152.17610.1 vs. uniprot
Match: A0A7S3NIL1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIL1_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.260e-13 Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 13 GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY 195
G+HTDTTFLT++PCAS PGLE+ PS G ++ EAS PG DV+ LAGE L + G+Y
Sbjct: 198 GSHTDTTFLTLVPCASQPGLEVFDPSIGAFLCHEASPLACPGRDVICLAGEFLDLLSNGKY 258
BLAST of mRNA_Ecto-sp13_S_contig67152.17610.1 vs. uniprot
Match: L1JA75_GUITC (2OG-FeII_Oxy domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JA75_GUITC) HSP 1 Score: 63.2 bits (152), Expect = 4.560e-10 Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 19 HTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY 195
HTDTTF+TVIPC+ PGLE++ P G W++PE+S V+++ GE+LQV G++
Sbjct: 282 HTDTTFVTVIPCSKIPGLEVLSPEEG-WIQPESSSGVDQTCSVIVMPGEMLQVLTGGQF 339
BLAST of mRNA_Ecto-sp13_S_contig67152.17610.1 vs. uniprot
Match: F0YH17_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH17_AURAN) HSP 1 Score: 60.8 bits (146), Expect = 3.080e-9 Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 13 GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY 195
G HTDT+F T++P +S PGLE+ PS WVRPEA+ +DV+ + GE L++ G +
Sbjct: 1471 GAHTDTSFFTLVPLSSPPGLEVFDPSLDAWVRPEAAEGAE-ATDVLCMPGEFLELASAGAF 1530
BLAST of mRNA_Ecto-sp13_S_contig67152.17610.1 vs. uniprot
Match: A0A1Z5J8Q8_FISSO (2OG-FeII_Oxy domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8Q8_FISSO) HSP 1 Score: 56.2 bits (134), Expect = 1.290e-7 Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 1 RPLAGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEA---SRDCRPGSDVMLLAGELLQVFGR 186
R + G HTD+TF+T +P A+ PGLE+ + RW RPEA S CR V+L+ GE LQ+ R
Sbjct: 493 REVFGAHTDSTFITAVPVATVPGLEVYDEAAERWYRPEALLTSSHCRY---VVLVPGEFLQLLTR 554
BLAST of mRNA_Ecto-sp13_S_contig67152.17610.1 vs. uniprot
Match: A0A7S2G6D7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G6D7_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 2.780e-7 Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 13 GTHTDTTFLTVIPCASA---PGLEIIQPSTGRWVRPEASRDCRPGSDVMLLAGELLQVFGRGRY 195
G+HTD+TF TVIP AS+ PG+++ S G+W+ PE + C +DV+++ GE LQV G Y
Sbjct: 90 GSHTDSTFFTVIPVASSVLQPGVQVF--SQGQWLCPETN--CDAETDVLIMTGEFLQVLSNGVY 149
BLAST of mRNA_Ecto-sp13_S_contig67152.17610.1 vs. uniprot
Match: A0A7R9UA21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA21_9STRA) HSP 1 Score: 48.9 bits (115), Expect = 4.340e-5 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1
Query: 13 GTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPE 114
GTHTDT+F+TVIP PG+E+ PS W+RPE
Sbjct: 225 GTHTDTSFVTVIPFTETPGIEVYDPSLDAWMRPE 258 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67152.17610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig67152.17610.1 >prot_Ecto-sp13_S_contig67152.17610.1 ID=prot_Ecto-sp13_S_contig67152.17610.1|Name=mRNA_Ecto-sp13_S_contig67152.17610.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp RPLAGTHTDTTFLTVIPCASAPGLEIIQPSTGRWVRPEASRDCRPGSDVMback to top mRNA from alignment at Ecto-sp13_S_contig67152:2..196- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig67152.17610.1 ID=mRNA_Ecto-sp13_S_contig67152.17610.1|Name=mRNA_Ecto-sp13_S_contig67152.17610.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=195bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67152:2..196- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig67152:2..196- >mRNA_Ecto-sp13_S_contig67152.17610.1 ID=mRNA_Ecto-sp13_S_contig67152.17610.1|Name=mRNA_Ecto-sp13_S_contig67152.17610.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=195bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67152:2..196- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |