mRNA_Ecto-sp13_S_contig6712.17607.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Match: D8LFS0_ECTSI (Defective in cullin neddylation protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFS0_ECTSI) HSP 1 Score: 452 bits (1163), Expect = 1.420e-159 Identity = 232/254 (91.34%), Postives = 238/254 (93.70%), Query Frame = 1
Query: 1 VRAMPTMRDLSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDVDIAQLVAASMPMPPAPPAVDQHKLDAWFDRYSDADEKDSILDDGIQQFYTELG----DPVVLIVSWKMEAEEMCVYSRLEWRRGMSKLGVSSTRQLRQKARGGEGGGAVAVEDRRSPTFREFYMFCFEYAKERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKIPVVTKDMWAQTLAFFCQVDPDLSNFDES 750
+RAMPTMRDLSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDVDIAQLVAASMPMPPAPPAVDQ KLDAWFDRYSDADEKDSILDDGIQQFYTELG D VVLI+SWKMEAEEMCVYSR EWRRGMSK+GVSSTRQLRQK + V V+DRRSPTFREFYMFCFEYAKERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAK+PVVTKDMWAQTLAFFCQVDPDLSNFDES
Sbjct: 1 MRAMPTMRDLSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDVDIAQLVAASMPMPPAPPAVDQRKLDAWFDRYSDADEKDSILDDGIQQFYTELGVDTQDLVVLIISWKMEAEEMCVYSRQEWRRGMSKMGVSSTRQLRQKLKDLR----VVVDDRRSPTFREFYMFCFEYAKERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKVPVVTKDMWAQTLAFFCQVDPDLSNFDES 250
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Match: A0A7S2V557_9STRA (Defective in cullin neddylation protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V557_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.780e-50 Identity = 96/252 (38.10%), Postives = 155/252 (61.51%), Query Frame = 1
Query: 22 RDLSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDV--DIAQLVAASMPMPPAPPAVDQHKLDAWFDRYSDADEKDS---ILDDGIQQFYTELG----DPVVLIVSWKMEAEEMCVYSRLEWRRGMSKLGVSSTRQLRQKARGGEGGGAVAVEDRRSPTFREFYMFCFEYAKERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRG---AKIPVVTKDMWAQTLAFFCQVDPDLSNF 741
R L++S+R ++ELC+F GA+E ++ +LL + +W + AADAFFS ++ + A +++ P P PP+++ K+DAWFD+Y++ E D I DDGI QF +L DPVVL++SW M A MC ++R EW+ GM + + L++K A+ +F++FY +C+++A++ GKKS+ LD+ L +WELVL +PL +++ ++L+ A PV+ KD W L F Q+ PDLSN+
Sbjct: 3 RRLTSSQRRRISELCAFTGASERQAASLLAQCDWVIETAADAFFSYNLAPEGAYDASSAQPAAPPPPSINLSKVDAWFDKYAEEPEGDGDRVIADDGITQFCQDLEIDTQDPVVLVLSWHMRAASMCTFTRQEWQCGMKAMHTETLADLKRKLP------ALRRSTDDFTSFKDFYAYCYDFARDEGKKSLGLDMALELWELVLRPRGYPLFQEWIDFLKEGGEAMHPVIPKDTWLLLLDFLHQMQPDLSNY 248
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Match: A0A024U837_9STRA (Defective in cullin neddylation protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U837_9STRA) HSP 1 Score: 150 bits (380), Expect = 3.340e-41 Identity = 88/237 (37.13%), Postives = 133/237 (56.12%), Query Frame = 1
Query: 52 VNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDVDIAQLVAASMPMPPAPPAVDQHKLDAWFDRYSDADEKDSILDDGIQQFYTELG----DPVVLIVSWKMEAEEMCVYSRLEWRRGMSKLGVSSTRQLRQKARGGEGGGAVAVEDRRSPTFREFYMFCFEYAKERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKIPVVTKDMWAQTLAFFCQVDPDLSNFDES 750
V EL +F G +I LL K W+V+ AAD FF + A + V++ + AWFD+Y+D D+ DS+LD+GI F ++G D VVL+++WKM+A EMC ++R E+ RGM +LG S LR K GE +A F+ FY+FCF Y+KE G+KS+ D+ +++WELVL P+FP + D+ +L+ +T+D W F +V+ +DE+
Sbjct: 13 VKELVNFTGCARERAIELLRKHQWSVSAAADVFFEDTANQAAVC-----------TVNEGAVIAWFDKYADPDDPDSMLDEGIMAFCDDIGIDAQDTVVLVIAWKMKAAEMCCFTRTEFVRGMRELGCESAAALRAKL--GEVRECIAAP----AAFKTFYLFCFGYSKEPGQKSLSKDMAVAMWELVLL-PKFPKVADWLAFLQEHPSYGITRDTWDLFYDFMVKVEASYDGYDEN 231
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Match: A0A6H5KQQ2_9PHAE (Defective in cullin neddylation protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ2_9PHAE) HSP 1 Score: 143 bits (360), Expect = 1.970e-40 Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 1
Query: 547 ERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKIPVVTKDMWAQTLAFFCQVDPDLSNFDES 750
ERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAK+PVVTKDMWAQTLAFFCQVDPDLSNFDES
Sbjct: 7 ERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKVPVVTKDMWAQTLAFFCQVDPDLSNFDES 74
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Match: A0A7S0IWR0_9EUKA (Defective in cullin neddylation protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IWR0_9EUKA) HSP 1 Score: 140 bits (353), Expect = 3.280e-37 Identity = 86/246 (34.96%), Postives = 134/246 (54.47%), Query Frame = 1
Query: 28 LSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDVDIAQLVAASMPMPPAPPAVDQHKLDAWFDRYSDADEKDSILDDGIQQFYTELG----DPVVLIVSWKMEAEEMCVYSRLEWRRGMSKLGVSSTRQLRQKARGGEGGGAVAVEDRRSPTFREFYMFCFEYAKERG--KKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKIPVVTKDMWAQTLAFFCQVDPDLSNFDE 747
L +R + + F G +E + +L +++W + +A DAFFSG A + P VD KL WFD Y D D + I GI++ EL D V+L+++WKM+A MCV++R EW RGM+ +GV S +L++ A+ + + +P F++FY FCF +AKE G +S+ ++V ++W L L G F L + E+L+ K +TKD+W L F Q++ + SNFDE
Sbjct: 5 LKRGQRDKIRQFMVFTGCSERVAGDMLKRYDWMLEQAVDAFFSGAASRASI-----------PPVDDAKLIKWFDTYKDVD-AEHIGVPGIEKLCAELDVDPTDVVMLMIAWKMKAATMCVFTREEWVRGMTAMGVDSVDKLKEHF------SALHEQLKSTPAFKDFYCFCFAFAKEPGFGVRSLPIEVADALWRLTLAG-RFKHLDRWLEFLQEKKERAITKDVWEMLLTFATQINDEFSNFDE 231
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Match: A0A1Y1IBL2_KLENI (Defective in cullin neddylation protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBL2_KLENI) HSP 1 Score: 135 bits (341), Expect = 2.210e-35 Identity = 81/247 (32.79%), Postives = 131/247 (53.04%), Query Frame = 1
Query: 19 MRDLSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDVDIAQLVAASMPMPPAPPA-VDQHKLDAWFDRYSDADEKDSILDDGIQQFYTEL----GDPVVLIVSWKMEAEEMCVYSRLEWRRGMSKLGVSSTRQLRQKARGGEGGGAVAVEDRRSPTFREFYMFCFEYAKERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKIPVVTKDMWAQTLAFFCQVDPDLSNFD 744
M L+ +++ V + C+ ATE S+A L +WNV A + +++ P P +P DQ +L+A + RY D D I +G+ QF +L GD V+L+++W M A MC +SR E+ G+ +GV S +LRQ ++ E + FRE YMF F++AKE+G+KS+ L+ L +W+L+ +PL+ + +L+ ++KD W+Q F +DP LSN+D
Sbjct: 1 MNKLNKAQKEKVRQFCAIADATEKASVAALKAADWNVEAAFEFYYN------------QPHPSSPQVRTDQRQLEALYSRYKDP-HADQISVEGVSQFCDDLQVDPGDVVMLVIAWHMGAATMCEFSRDEFISGLKSIGVDSISKLRQLLP------SLRAEMKDDNKFREIYMFTFDWAKEKGQKSLALETALGMWKLLYAQKPWPLVDPWCSFLQKKHNKAISKDTWSQVFEFAKSIDPSLSNYD 228
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Match: A0A7S0LQ44_9EUKA (Defective in cullin neddylation protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LQ44_9EUKA) HSP 1 Score: 134 bits (337), Expect = 1.360e-34 Identity = 88/246 (35.77%), Postives = 136/246 (55.28%), Query Frame = 1
Query: 28 LSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDVDIAQLVAASMPMPPAPPAVDQHKLDAWFDRYSDADEKDSILDDGIQQFYTELG----DPVVLIVSWKMEAEEMCVYSRLEWRRGMSKLGVSSTRQLRQKARGGEGGGAVAVEDRRSPTFREFYMFCFEYAKERG--KKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKIPVVTKDMWAQTLAFFCQVDPDLSNFDE 747
L +R V +L F G +E ++ LL + +W + A D FFS AAS P+ P VD KL WFD Y D+D ++I GI++F ELG D ++L+++WKM++ MCV++R EW RGM +GV + L+ G GG + + + + +++FY FCF +AKE G +S+ ++V ++W L+L EF L + E+L K +TKD+W L F ++ + SNFDE
Sbjct: 27 LKRPQRDKVRQLMVFTGCSERVAMELLKREDWILERAVDTFFSD--------AASQPVGPP---VDTAKLGTWFDTYKDSD-GETIGVQGIEKFCVELGVDPTDIIMLLIAWKMKSATMCVFTREEWVRGMVSIGVDNLNALK----GAFGG--LHEQLKNANAYKDFYSFCFNFAKEPGFGVRSLPIEVADAMWRLILPN-EFKHLARWLEFLEEKKERAITKDVWDMLLTFATSINDEFSNFDE 253
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Match: A0A2K1JS87_PHYPA (Defective in cullin neddylation protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JS87_PHYPA) HSP 1 Score: 129 bits (323), Expect = 9.150e-33 Identity = 82/246 (33.33%), Postives = 126/246 (51.22%), Query Frame = 1
Query: 19 MRDLSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDVDIAQLVAASMPMPPAPPAVDQHKLDAWFDRYSDADEKDSILDDGIQQFYTEL----GDPVVLIVSWKMEAEEMCVYSRLEWRRGMSKLGVSSTRQLRQKARGGEGGGAVAVEDRRSPTFREFYMFCFEYAKERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKIPVVTKDMWAQTLAFFCQVDPDLSNFD 744
M L R V + + GA E ++ L +WN+ A + F++ QL PA P D L+ ++ +Y DA D IL DG+ F +L GD V+L++SW M+A MC +SR E+ G+ LGV S +L+ ++ E + FRE Y F F +AKE+G+KS+ LD L +W L+ +PL++ + ++L+ ++KD WAQ L F +DP LSN+D
Sbjct: 1 MNKLGRGHRDKVQQFMTITGANEKAALTALKASDWNLEGAFEIFYN------QL--------PARPVTDPRHLEEFYLKYKDA-YSDMILVDGVSAFCDDLQVDPGDVVMLVISWHMKAVTMCEFSRQEFIGGLQSLGVDSLYKLKHLLP------SLRAELKDEHKFREIYNFSFNWAKEKGQKSLALDTALGMWRLLFAERLWPLVESWCQFLQAKHNKAISKDTWAQLLEFSKTIDPTLSNYD 225
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Match: A0A6U9QDG0_9CHLO (Defective in cullin neddylation protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9QDG0_9CHLO) HSP 1 Score: 128 bits (321), Expect = 3.300e-32 Identity = 78/249 (31.33%), Postives = 133/249 (53.41%), Query Frame = 1
Query: 16 TMRDLSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDVDIAQLVAASMPMPPAPPAVDQHKLDAWFDRYSDADEKDSILDDGIQQFYTEL----GDPVVLIVSWKMEAEEMCVYSRLEWRRGMSKLGVSSTRQLRQKARGGEGGGAVAVEDRRSPTFREFYMFCFEYAKERGKKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKIPVVTKDMWAQTLAFFCQVDPDLSNFDES 750
TM L+ ++ V + C +G E ++ L +WNV A + F+SGD+ P P VD L+ + RY D +D IL +G+ QF +L D V+L++S+ ++A+ MC Y+ E+ G++KLG+ S +++ + + E TFRE Y + F +++E+G+KS+ LDV + +W L+ T +PLL+D+ +L+ V++D W Q L F ++ DLS++D S
Sbjct: 26 TMNRLNRVQKEKVRQFCGIIGTDEKLALEALRCADWNVESAIEMFYSGDI------------PSLRPVVDLKALETLYKRYRDK-HQDLILAEGVGQFCDDLDVDPSDVVMLVLSYHLKAQTMCEYTHEEFVNGLAKLGLDSIEKIKDRIP------KMRAELEDPSTFREIYAYAFLFSREKGQKSVMLDVAIEMWRLLFTDGRWPLLEDWCTFLQTYHNKAVSRDTWLQLLEFV-KLGDDLSSYDPS 254
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Match: A0A7S3WL43_9SPIT (Defective in cullin neddylation protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WL43_9SPIT) HSP 1 Score: 125 bits (313), Expect = 3.280e-31 Identity = 76/252 (30.16%), Postives = 132/252 (52.38%), Query Frame = 1
Query: 10 MPTMRDLSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGDVDIAQLVAASMPMPPAPPAVDQHKLDAWFDRYSDADEKDSILDDGIQQFYTELG----DPVVLIVSWKMEAEEMCVYSRLEWRRGMSKLGVSSTRQLRQKARGGEGGGAVAVEDRRSPTFREFYMFCFEYAKERG--KKSIELDVCLSVWELVLTGPEFPLLKDFSEYLRGAKIPVVTKDMWAQTLAFFCQVDPDLSNFDE 747
M + ++ ++ + C F GA+E +I++L + +W++ A D FFS A P VD K+ FD Y D E+D + G+++F ++LG D ++L+++W+M+A MCV++R EW RG S +G + +++ A+ + FR+FY FCF +AK+ G +++ +DV +W+L+L G F L + E+ ++ VTKD+W F ++ D+SNFDE
Sbjct: 1 MSSASGMARGQKEKTRQFCVFTGASERVAISMLKRTDWHLESAVDTFFSASGGGGFS---------AGPRVDTAKIGKLFDSYRDEGEEDIGIS-GLERFCSDLGVEPTDVIMLLIAWRMKAATMCVFTRDEWIRGFSAVGADTIDKMKAAFP------ALRAQLDEPTAFRDFYGFCFGFAKDPGFGVRTLPMDVASQMWQLIL-GQRFKYLDAWLEFCEVKQVKAVTKDVWDMLFTFSTSINDDMSNFDE 235 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6712.17607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6712.17607.1 >prot_Ecto-sp13_S_contig6712.17607.1 ID=prot_Ecto-sp13_S_contig6712.17607.1|Name=mRNA_Ecto-sp13_S_contig6712.17607.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=247bp MPTMRDLSASRRASVNELCSFVGATEVESIALLGKFNWNVAEAADAFFSGback to top mRNA from alignment at Ecto-sp13_S_contig6712:3490..7468+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6712.17607.1 ID=mRNA_Ecto-sp13_S_contig6712.17607.1|Name=mRNA_Ecto-sp13_S_contig6712.17607.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3979bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6712:3490..7468+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6712:3490..7468+ >mRNA_Ecto-sp13_S_contig6712.17607.1 ID=mRNA_Ecto-sp13_S_contig6712.17607.1|Name=mRNA_Ecto-sp13_S_contig6712.17607.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=741bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6712:3490..7468+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |