prot_Ecto-sp13_S_contig12059.1757.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Match: D7FM71_ECTSI (60S ribosomal protein L38 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM71_ECTSI) HSP 1 Score: 110 bits (274), Expect = 1.810e-30 Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = 0
Query: 1 RSRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLAQSLPPGLHKKQLQ 57
R RDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKL QSLPPGLHKKQLQ
Sbjct: 16 RRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQLQ 72
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Match: A0A836CJ21_9STRA (Ribosomal protein L38 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ21_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.810e-18 Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 0
Query: 1 RSRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLAQSLPPGLHKKQL 56
R +DAKSVKIK K TKFKIRCSRYLYTLCV DK+KADKL QSLPPGL +K +
Sbjct: 16 RRKDAKSVKIK--KTAEVTKFKIRCSRYLYTLCVADKDKADKLTQSLPPGLQRKDI 69
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Match: UPI00083C7834 (60S ribosomal protein L38 n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C7834) HSP 1 Score: 78.2 bits (191), Expect = 8.310e-18 Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 0
Query: 1 RSRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLAQSLPPGLHKKQ 55
R +DAKSVKIKNN ++TKFK+RCSR+LYTL + DKEKA+KL QSLPPGL K+
Sbjct: 16 RRKDAKSVKIKNNPKKNNTKFKVRCSRFLYTLVINDKEKAEKLKQSLPPGLQVKE 70
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Match: RL38_BRABE (60S ribosomal protein L38 n=5 Tax=Eumetazoa TaxID=6072 RepID=RL38_BRABE) HSP 1 Score: 77.4 bits (189), Expect = 1.590e-17 Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 0
Query: 1 RSRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLAQSLPPGLHKKQL 56
R +DAKSVKIK NK + KFK+RCSRYLYTL +TDKEKADKL QSLPPGL K+L
Sbjct: 16 RRKDAKSVKIKKNK--DNVKFKVRCSRYLYTLVITDKEKADKLKQSLPPGLAVKEL 69
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Match: H3BEF3_LATCH (60S ribosomal protein L38 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3BEF3_LATCH) HSP 1 Score: 77.4 bits (189), Expect = 2.180e-17 Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query: 1 RSRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLAQSLPPGLHKKQL 56
R +DAKSVKIK NK + KFK+RCS+YLYTL +TDKEKA+KL QSLPPGL KK++
Sbjct: 23 RRKDAKSVKIKKNK--ENVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGLRKKKI 76
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Match: A0A8C6FVY5_MOSMO (60S ribosomal protein L38 n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A8C6FVY5_MOSMO) HSP 1 Score: 76.6 bits (187), Expect = 3.210e-17 Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 0
Query: 1 RSRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLAQSLPPGLHKKQL 56
R +DAKSVKIK NK + KFKIRCSRYLYTL +TDKEKA+KL QSLPPGL K+L
Sbjct: 16 RRKDAKSVKIKKNK--DNVKFKIRCSRYLYTLVITDKEKAEKLKQSLPPGLAMKEL 69
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Match: UPI001601EE84 (60S ribosomal protein L38-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001601EE84) HSP 1 Score: 77.4 bits (189), Expect = 3.240e-17 Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 0
Query: 1 RSRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLAQSLPPGLHKKQL 56
R +DAKSVKIK NK + KFK+RCSRYLYTL +TDKEKADKL QSLPPGL K+L
Sbjct: 43 RRKDAKSVKIKKNK--DNVKFKVRCSRYLYTLVITDKEKADKLKQSLPPGLAVKEL 96
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Match: A0A8C3T3Y6_CHESE (60S ribosomal protein L38 n=1 Tax=Chelydra serpentina TaxID=8475 RepID=A0A8C3T3Y6_CHESE) HSP 1 Score: 76.3 bits (186), Expect = 3.720e-17 Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0
Query: 2 SRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLAQSLPPGLHKKQL 56
S+DAKSVKIK NK + KFK+RCSRYLYTL +TDKEKA+KL QSLPPGL K+L
Sbjct: 9 SKDAKSVKIKKNK--DNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKEL 61
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Match: A0A8C7DG53_ONCKI (60S ribosomal protein L38 n=5 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7DG53_ONCKI) HSP 1 Score: 76.3 bits (186), Expect = 4.560e-17 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query: 1 RSRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLAQSLPPGLHKKQL 56
R +DAKSVKIK NK + KFK+RCSRYLYTL +TDKEKA+KL QSLPPGL K+L
Sbjct: 16 RRKDAKSVKIKKNK--ENVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKEL 69
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Match: A0A4W6DZC8_LATCA (60S ribosomal protein L38 n=4 Tax=Percomorphaceae TaxID=1489872 RepID=A0A4W6DZC8_LATCA) HSP 1 Score: 75.9 bits (185), Expect = 5.560e-17 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query: 1 RSRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLAQSLPPGLHKKQL 56
R +DAKSVKIK NK + KFK+RCSRYLYTL +TDKEKA+KL QSLPPGL K+L
Sbjct: 10 RRKDAKSVKIKKNK--DNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKEL 63 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12059.1757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig12059.1757.1 ID=prot_Ecto-sp13_S_contig12059.1757.1|Name=mRNA_Ecto-sp13_S_contig12059.1757.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=58bpback to top |