prot_Ecto-sp13_S_contig66897.17564.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig66897.17564.1
Unique Nameprot_Ecto-sp13_S_contig66897.17564.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length52
Homology
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Match: A0A6H5L2I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2I8_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 7.260e-22
Identity = 44/46 (95.65%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVRAG 46
            MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEV  G
Sbjct:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVMIG 46          
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Match: D8LJ06_ECTSI (CCT-beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ06_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.550e-19
Identity = 44/46 (95.65%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVRAG 46
            MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEV  G
Sbjct:  306 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVMIG 351          
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Match: A0A836CDN2_9STRA (CCT-beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDN2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.090e-16
Identity = 40/46 (86.96%), Postives = 41/46 (89.13%), Query Frame = 0
Query:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVRAG 46
            MAIEHADFEGVERLAAVTG A ASTF+HPELAVLGECK IEEV  G
Sbjct:  306 MAIEHADFEGVERLAAVTGAAIASTFEHPELAVLGECKVIEEVMIG 351          
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Match: A0A482QWT2_9EURY (Uncharacterized protein (Fragment) n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482QWT2_9EURY)

HSP 1 Score: 75.9 bits (185), Expect = 1.100e-15
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVRAG 46
            MAIEHADF+G+ERLAAVTGG  ASTF+HPEL  LGECK IEE+  G
Sbjct:   84 MAIEHADFDGIERLAAVTGGEVASTFEHPELVALGECKLIEEILIG 129          
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Match: A0A7S1BZ54_9STRA (CCT-beta n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BZ54_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 6.490e-15
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVRAG 46
            MAIEHADF+G+ERLAAVTGG  ASTFDHPEL  LGEC+ IEEV  G
Sbjct:  306 MAIEHADFDGIERLAAVTGGEVASTFDHPELITLGECEVIEEVMIG 351          
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Match: A0A7S2RXR6_9STRA (CCT-beta n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RXR6_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.210e-14
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVRAG 46
            MAIEHADF+G+ERLAAVTGG  ASTFDHPEL  LGEC  IEE+  G
Sbjct:  305 MAIEHADFDGIERLAAVTGGEVASTFDHPELVTLGECDVIEEIMIG 350          
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Match: A0A7S1Y2W1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2W1_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.450e-14
Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVRAG 46
            MAIEHADFEGVE+LAAVTGG   STFDHPEL  LGEC  IEE+  G
Sbjct:   36 MAIEHADFEGVEQLAAVTGGEVVSTFDHPELVTLGECDLIEEIMIG 81          
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Match: A0A7S2F9V5_9STRA (CCT-beta n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9V5_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.660e-14
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVRAG 46
            MAIEHADF+G+ERLAAVTGG   STFDHPEL  LGECK IEE+  G
Sbjct:  306 MAIEHADFDGIERLAAVTGGEICSTFDHPELVSLGECKLIEEIMIG 351          
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Match: A0A7S1BYY4_9STRA (CCT-beta n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYY4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.870e-14
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEV 43
            MAIEHADF+G+ERLAAVTGG  ASTFDHPEL  LGEC+ IEEV
Sbjct:  306 MAIEHADFDGIERLAAVTGGEVASTFDHPELITLGECEVIEEV 348          
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Match: A0A7S0CJT2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CJT2_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.240e-14
Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVRAG 46
            MAIEHADF+GVERLAAVTGG   STFDHPEL  LGEC  IEE+  G
Sbjct:  122 MAIEHADFDGVERLAAVTGGEVVSTFDHPELVTLGECDVIEEIMIG 167          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig66897.17564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2I8_9PHAE7.260e-2295.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ06_ECTSI1.550e-1995.65CCT-beta n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A836CDN2_9STRA2.090e-1686.96CCT-beta n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
A0A482QWT2_9EURY1.100e-1576.09Uncharacterized protein (Fragment) n=1 Tax=Methano... [more]
A0A7S1BZ54_9STRA6.490e-1578.26CCT-beta n=3 Tax=Corethron hystrix TaxID=216773 Re... [more]
A0A7S2RXR6_9STRA1.210e-1476.09CCT-beta n=1 Tax=Eucampia antarctica TaxID=49252 R... [more]
A0A7S1Y2W1_9STRA1.450e-1476.09Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2F9V5_9STRA1.660e-1476.09CCT-beta n=2 Tax=Florenciella parvula TaxID=236787... [more]
A0A7S1BYY4_9STRA1.870e-1481.40CCT-beta n=2 Tax=Corethron hystrix TaxID=216773 Re... [more]
A0A7S0CJT2_9STRA2.240e-1476.09Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027409GroEL-like apical domain superfamilyGENE3D3.50.7.10coord: 1..48
e-value: 8.2E-14
score: 53.8
IPR027409GroEL-like apical domain superfamilySUPERFAMILY52029GroEL apical domain-likecoord: 1..45
NoneNo IPR availablePANTHERPTHR11353CHAPERONINcoord: 1..45
IPR012716T-complex protein 1, beta subunitPANTHERPTHR11353:SF23T-COMPLEX PROTEIN 1 SUBUNIT BETAcoord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig66897contigEcto-sp13_S_contig66897:296..451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig66897.17564.1mRNA_Ecto-sp13_S_contig66897.17564.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig66897 269..451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig66897.17564.1 ID=prot_Ecto-sp13_S_contig66897.17564.1|Name=mRNA_Ecto-sp13_S_contig66897.17564.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
MAIEHADFEGVERLAAVTGGATASTFDHPELAVLGECKKIEEVRAGLPCA
T*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027409GroEL-like_apical_dom_sf
IPR012716Chap_CCT_beta