prot_Ecto-sp13_S_contig6686.17560.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6686.17560.1
Unique Nameprot_Ecto-sp13_S_contig6686.17560.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length344
Homology
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Match: D8LMZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ1_ECTSI)

HSP 1 Score: 444 bits (1142), Expect = 1.300e-143
Identity = 231/250 (92.40%), Postives = 240/250 (96.00%), Query Frame = 0
Query:    1 GDARYITVKRKKNGGXXDGDDAERPPMLQLGNARDATLKAYFSRHPPSRREAETVMSAAVGGGMHAAAELATQKRHKAALLDRQAKAVTSPGASAQELQRRASVYNAAQSKRQRAAGHQRMSAFRQGLPAWEYRDTIVKMVQDHQACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLREFTHVLIDE 250
            GDAR ITVK+     XXDG+ A+RPPMLQLGNARDA LKAYFSRHPPSRREA+TVMSAAVGGGMHAAAELATQKRHKAALLDRQAKAVTSPGASAQELQRR S+YNAAQS+RQRAAGHQRMSAFRQGLPAWEYRDTIV MV+DHQACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGE+IGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPML+EFTHVLIDE
Sbjct:  108 GDARDITVKKXXXXXXXDGNGAQRPPMLQLGNARDAALKAYFSRHPPSRREADTVMSAAVGGGMHAAAELATQKRHKAALLDRQAKAVTSPGASAQELQRRTSMYNAAQSRRQRAAGHQRMSAFRQGLPAWEYRDTIVNMVRDHQACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGEKIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLKEFTHVLIDE 357          
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Match: A0A6H5JK76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK76_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 4.400e-60
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0
Query:  145 QACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLREFTHVLIDEASHG 254
            QACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPML+EFTHVLIDEAS G
Sbjct:    5 QACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLKEFTHVLIDEASDG 114          
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Match: A0A835Z8N8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N8_9STRA)

HSP 1 Score: 196 bits (498), Expect = 2.670e-52
Identity = 134/351 (38.18%), Postives = 165/351 (47.01%), Query Frame = 0
Query:    1 GDARYITVKRKKNGGXXDGDDAERPPMLQLGNARDATLKAYFSRHPPSRREAETVMSAAV-GGGMHAAAELATQKRHKAALLDRQAKAVTSPGASAQELQRRASVYNAAQSKRQRAAGHQRMSAFRQGLPAWEYRDTIVKMVQDHQACLVSGETGCGKSTQV----------------------------------------------------------------------------------------------------PQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLREFTHVLIDE 250
            GD+RYITV++ K  G   G   E P + +L   R   L  YF  HP    E   VM  A  GGG+H AAELA Q R +      +A    + GA   EL+ R   Y AAQ +R+R   +Q+M   RQ LPAW Y ++I+++++ HQ  LVSGETGCGKSTQV                                                                                                    PQF+LDD + G  C I CTQPRRISAIAVAERIAEER E  G  VGYTIRLES++S   QL +MTPG+LLKKL  DPML+++THV+IDE
Sbjct:   67 GDSRYITVRKAKKAGNAGG---ELPRLGELDLPRQVALATYFQAHPAGDEEMGAVMQLATEGGGIHTAAELAKQVRQQRT----KAAGAAASGAGEAELKTRERCYLAAQERRRRQPQYQQMLRCRQNLPAWGYCESILELIRAHQVVLVSGETGCGKSTQVNCCGDSVLARVHMHTLASLPIVQRCEYVDCAAHCGVRDRGTRIGSTSAFLPIVRLRQEYAGATVHPGRRSAGGALHDRVRAAAPHLNRCNRRNRRAAEQVPQFILDDAAQGARCMIACTQPRRISAIAVAERIAEERCEEAGAVVGYTIRLESAMSSSVQLCMMTPGVLLKKLNTDPMLQQYTHVIIDE 410          
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Match: W7TIW9_9STRA (Atp-dependent rna helicase dhx57 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIW9_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.850e-43
Identity = 108/283 (38.16%), Postives = 150/283 (53.00%), Query Frame = 0
Query:    4 RYITVKRK-KNG--GXXDGDDAERPPMLQLGNARDATLKAYFSRHPPSRREAETVMSAAVG----------------------GGMHAAAEL-----------ATQKRHKAALLDRQAKAVTSPGASAQELQRRASVYNAAQSKRQRAAGHQRMSAFRQGLPAWEYRDTIVKMVQDHQACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLREFTHVLIDE 250
            R+ITV +K K G  G    +D +R P   L       L+ + +RH    +E E ++   +                       GG    A+L           A         L ++ + +  P    + L RR + +   Q++R R   +  M   R  LPA E+   + ++V+ H   +VSGETGCGKSTQVPQF+LDDP +GP  K+  TQPRRISA+AVAER+A ER E +G T+GY IRLES VS+ +Q+V MTPG+LL+KLG D  LREF  ++IDE
Sbjct:  128 RFITVSKKPKKGPHGDEQDEDLDRYPPFHLKKESLGLLRRHLARHAVRSQEREALLQQCISRSASSEATNTCAGNPTAVERGRGGAVRVADLRDPGPTPGGRAAVPATQTGQSLSKKQQRLYDPAMEEERLVRRCAEHAEKQARRDRHPRYASMLQARGRLPAAEHAALVTRLVKTHPVVVVSGETGCGKSTQVPQFMLDDPDVGPSLKMAVTQPRRISAVAVAERVAAERMEAVGQTIGYNIRLESEVSEQSQVVFMTPGVLLRKLGGDRELREFNVIMIDE 410          
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Match: A0A7S3MHY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHY3_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.430e-42
Identity = 77/134 (57.46%), Postives = 100/134 (74.63%), Query Frame = 0
Query:  108 AQSKRQRAAG--HQRMSAFRQGLPAWEYRDTIVKMVQDHQACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPM 239
            A+S+RQRAA   +  +   R  LPA  YR+ +  ++++HQ  L+SGETGCGKSTQVPQFLLDD +IGP C++  TQPRRISA+AVAERIA ER E +G TVGY+IRL+S  S  TQ+  MT G+LL+K+  DP+
Sbjct:   33 AESQRQRAANSNYHSIQKKRSALPASHYREAVCNLLKEHQIVLISGETGCGKSTQVPQFLLDDETIGPSCRMAITQPRRISAVAVAERIASERSETVGTTVGYSIRLDSEKSARTQVTFMTAGVLLRKVRFDPL 166          
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Match: F0YGX1_AURAN (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGX1_AURAN)

HSP 1 Score: 153 bits (386), Expect = 1.800e-41
Identity = 76/137 (55.47%), Postives = 95/137 (69.34%), Query Frame = 0
Query:  121 MSAFRQGLPAWEYRDTIVKMVQDHQACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLREFTHVLIDEASHGPRE 257
            M A R  LPAWEYRD +  +V  H   LV+GETGCGKSTQVPQF+LD     P  +I C+QPRRISA+AVAER+A ERG ++G  VG+ +R ESS S  T+L   TPG+LL+KLG DP L  +TH ++DE     R+
Sbjct:    2 MLAARMKLPAWEYRDRVAALVAAHDVVLVAGETGCGKSTQVPQFVLDGD---PEARIACSQPRRISAMAVAERVASERGSQLGREVGFHVRFESSFSDATRLCFATPGVLLRKLGSDPDLVAYTHFILDEVHEEDRD 135          
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Match: A0A7S2UJW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJW6_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.830e-41
Identity = 83/145 (57.24%), Postives = 106/145 (73.10%), Query Frame = 0
Query:  107 AAQSKRQRAAGHQRMSAFRQGLPAWEYRDTIVKMVQDHQACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKD-TQLVLMTPGILLKKLGRDPMLREFTHVLIDE 250
            A+Q  ++     ++M   RQ LPA+ Y ++I K VQ H   +++G+TGCGKSTQVPQFLLDDP+IGP C IV TQPRRISAI+VAER+A E+      TVGY +RLESS S D TQLV +TPGILL+KL   P L E+TH+++DE
Sbjct:    6 ASQKAKRHDPSFKQMLKHRQQLPAFSYAESICKSVQSHAVTILTGDTGCGKSTQVPQFLLDDPTIGPTCNIVITQPRRISAISVAERVASEQCSSSSKTVGYQVRLESSFSPDETQLVFVTPGILLRKLQSSPSLSEYTHIILDE 150          
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Match: A0A8J2WKW7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WKW7_9STRA)

HSP 1 Score: 162 bits (411), Expect = 8.980e-41
Identity = 101/243 (41.56%), Postives = 127/243 (52.26%), Query Frame = 0
Query:   22 AERPPMLQLGNARDATLKAYFSRHPPSRREAETVMSAAVGG-------GMHAAAELATQKRHKAALLDRQAKAVTSPGASAQELQRRASVYNAAQSKRQRAAGHQRMSAFRQGLPAWEYRDTIVKMVQDHQACLVSGETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLREFTHVLIDEASHGPRE 257
            AE  P L L       L A+F  HPP+  E        V         G   +     + RHK+                      RA+V + A++K + A     M   RQ LPAWE R  +V +V+ H   LV+GETGCGKSTQVPQFL D  +      I C+QPRR+SAIAVAER+A ERGE  G TVGY +R ESS S  T+L+  TPG+LL+KLG DP L  +TH L+DE     R+
Sbjct:   78 AEDAPRLDLAKDAAVVLDAHFRAHPPTPEELNDAREGRVADAKPSPEPGTVRSTLRNVKNRHKS----------------------RAAVIDYAKTKPECATAPSAMRKARQKLPAWEARSKVVDLVKRHDVVLVAGETGCGKSTQVPQFLFDASACE--ASIACSQPRRLSAIAVAERVAAERGETCGSTVGYQVRFESSFSAKTRLLFATPGVLLRKLGSDPDLVSYTHFLLDEVHEEDRD 296          
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Match: A0A8J9RMQ1_9CHLO (3'-5' RNA helicase YTHDC2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RMQ1_9CHLO)

HSP 1 Score: 161 bits (408), Expect = 2.300e-40
Identity = 104/253 (41.11%), Postives = 146/253 (57.71%), Query Frame = 0
Query:    1 GDARYITVKRKKNGGXXDGDDAERPPMLQLGNARDATLKAYFSRHPPSRREAETVMSAAVGGGMHAAAELATQKRHKAALLDRQAKAVTSPGA--SAQELQRRASVYNAAQSKRQRAAGHQRMSAFRQGLPAWEYRDTIVKMVQDHQACLVSGETGCGKSTQVPQFLLDDP-SIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLREFTHVLIDE 250
            GD+R +TV +    G    D  + P    +  A    L+AY+ RH P   E   +     GGG+ +      Q   +   L  + +  T+  A  S QE++R+    +AA  K Q+A     +++ R  LP   YR  I++ +  HQ  LV+GETGCGK+TQVPQFLL+D  + G GC+I+CTQPRRISAI++AER+A ERGER G TVGYTIRLES     + L+  T G+LL+ L +   L + THV++DE
Sbjct:   78 GDSRQVTVSKPAASGQLAKDTFDLP----VSPASLEVLQAYYERHLPKEEELTAIQQ---GGGVTSLGAADHQVHQQ---LGGRKRGTTTGAAHFSEQEVRRQ----HAAWQKAQQAPAVTAITSTRNSLPIAPYRSDILQAIASHQVVLVAGETGCGKTTQVPQFLLEDAWAAGRGCRIMCTQPRRISAISIAERVAAERGERCGTTVGYTIRLESKGGPASSLMFCTNGVLLRMLTQGEGLNDITHVIVDE 316          
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Match: UPI001442EEED (LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase DHX57 n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI001442EEED)

HSP 1 Score: 160 bits (404), Expect = 7.800e-40
Identity = 77/145 (53.10%), Postives = 104/145 (71.72%), Query Frame = 0
Query:  111 KRQRAAGHQRMSAFRQGLPAWEYRDTIVKMVQDHQACLVSGETGCGKSTQVPQFLLDD-----PSIGPGCKIVCTQPRRISAIAVAERIAEERGERIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLREFTHVLIDE 250
            ++Q +  +++M   R+ LPAW   D I++M+ +HQ  ++SGETGCGKSTQVPQFLLDD     P++     I+CTQPRRISA+ VA+R+A ER ERIG TVGY IRLES +S  T+L   T GILL++L  +P L + THV++DE
Sbjct:  411 EKQNSPKYKKMKEIRRKLPAWSKMDNILEMIHEHQVTIISGETGCGKSTQVPQFLLDDWILNRPTLKEHVNIICTQPRRISAVGVAKRVASERDERIGDTVGYQIRLESKMSNKTRLTFCTTGILLQRLSMNPELNDVTHVIVDE 555          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6686.17560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMZ1_ECTSI1.300e-14392.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK76_9PHAE4.400e-6098.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8N8_9STRA2.670e-5238.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TIW9_9STRA2.850e-4338.16Atp-dependent rna helicase dhx57 n=2 Tax=Monodopsi... [more]
A0A7S3MHY3_9STRA2.430e-4257.46Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
F0YGX1_AURAN1.800e-4155.47Helicase ATP-binding domain-containing protein (Fr... [more]
A0A7S2UJW6_9STRA4.830e-4157.24Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A8J2WKW7_9STRA8.980e-4141.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J9RMQ1_9CHLO2.300e-4041.113'-5' RNA helicase YTHDC2 n=1 Tax=Coccomyxa sp. Ob... [more]
UPI001442EEED7.800e-4053.10LOW QUALITY PROTEIN: putative ATP-dependent RNA he... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 126..328
e-value: 1.3E-8
score: 44.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 138..253
score: 12.823
NoneNo IPR availableGENE3D3.40.50.300coord: 76..254
e-value: 3.8E-56
score: 191.8
NoneNo IPR availablePANTHERPTHR18934:SF209coord: 87..250
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 87..250
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 137..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6686contigEcto-sp13_S_contig6686:3307..7319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6686.17560.1mRNA_Ecto-sp13_S_contig6686.17560.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6686 3307..7320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6686.17560.1 ID=prot_Ecto-sp13_S_contig6686.17560.1|Name=mRNA_Ecto-sp13_S_contig6686.17560.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp
GDARYITVKRKKNGGGGDGDDAERPPMLQLGNARDATLKAYFSRHPPSRR
EAETVMSAAVGGGMHAAAELATQKRHKAALLDRQAKAVTSPGASAQELQR
RASVYNAAQSKRQRAAGHQRMSAFRQGLPAWEYRDTIVKMVQDHQACLVS
GETGCGKSTQVPQFLLDDPSIGPGCKIVCTQPRRISAIAVAERIAEERGE
RIGGTVGYTIRLESSVSKDTQLVLMTPGILLKKLGRDPMLREFTHVLIDE
ASHGPREGPKQRVPADRAEGAAGQETGPEADADERYPSAGQVLRVLRRVS
HHHYRSEDVPCAGVFLGGRAGADGLPQRDRRRHRRRRRRQGFAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase