prot_Ecto-sp13_S_contig6685.17558.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6685.17558.1
Unique Nameprot_Ecto-sp13_S_contig6685.17558.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length265
Homology
BLAST of mRNA_Ecto-sp13_S_contig6685.17558.1 vs. uniprot
Match: D7FJR5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJR5_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 1.730e-154
Identity = 248/265 (93.58%), Postives = 253/265 (95.47%), Query Frame = 0
Query:    1 MGTLRALVGFLALIGANKVLSFVPGGQLNVARSSRRVDRLSWSITRCSGARPLAASVPNGIGEGKRVGFASGLEEXXXXXX-AADGEPKAKLQTVNARLLAQIEEQGKGIVIPTEESKKIKRKEEDLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGELDPSPEASGSKTAAPGASEEEKELLMLQQADESLRKAQEEIERKVGKL 264
            MGT RALVGFLALIGA +VLSFVPGGQLNVAR SR +D LSW+ TRCSGARPLAASVPNG+GEGKRVGFASG E+XXXXXX  ADGE KAKLQTVNARLLAQIEEQGKGIVIPTEESKKIKRKEEDLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGELDPSPEASGSK AAPGASEEEKELLMLQQADESLRKAQEEIER VGKL
Sbjct:    1 MGTFRALVGFLALIGAKRVLSFVPGGQLNVARFSRSIDGLSWATTRCSGARPLAASVPNGVGEGKRVGFASGSEDXXXXXXXGADGETKAKLQTVNARLLAQIEEQGKGIVIPTEESKKIKRKEEDLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGELDPSPEASGSKKAAPGASEEEKELLMLQQADESLRKAQEEIERNVGKL 265          
BLAST of mRNA_Ecto-sp13_S_contig6685.17558.1 vs. uniprot
Match: A0A7S1UHH8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHH8_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 4.270e-16
Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 0
Query:   92 QTVNARLLAQIEEQGKGIVIPTEE-SKKIKRKEEDLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGEL 217
            +++NA+   +++E G  ++   EE + K +R E DLNG NP  A LGAG A  +S  +W+ T +   AY      ESD     R++  +KQ VVGL +L  G+FGV ALG+G++ A +AVG+++GEL
Sbjct:   31 ESINAQSGLEVDEDG--VLQNAEEVTGKFERVEVDLNGTNPLQAFLGAGLAGLLSTVAWRFTTFSIDAYAKATPTESDFYLTNRLSGVMKQVVVGLGSLATGVFGVIALGLGLLGARIAVGISRGEL 155          
BLAST of mRNA_Ecto-sp13_S_contig6685.17558.1 vs. uniprot
Match: A0A7S4B5P2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5P2_CHRCT)

HSP 1 Score: 71.2 bits (173), Expect = 6.960e-11
Identity = 51/138 (36.96%), Postives = 75/138 (54.35%), Query Frame = 0
Query:   85 GEPKAKLQTVNARLLAQIEEQGKGIVIPTEESKKIKRKEEDLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGELDPSPE 222
            G+P +K    N  LLA+I+     ++ PT E    K    DLNG+ P   ++GA   A +   +W+ T+     +   PAEES    V R+T   +  VV + ALGAG+ G+ ++G   +A  VA+GV KGELDP+ E
Sbjct:  113 GQPTSK----NEALLAEIQ----ALMPPTAEPAPEKMP-VDLNGIRPRDLVIGALSYAVVCVLAWQFTIAAGTYFAEHPAEESSFYVVNRLTGLARVVVVSMGALGAGVTGIASVGQAALAVQVAIGVMKGELDPTRE 241          
BLAST of mRNA_Ecto-sp13_S_contig6685.17558.1 vs. uniprot
Match: A0A7S4N355_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N355_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.210e-10
Identity = 54/155 (34.84%), Postives = 75/155 (48.39%), Query Frame = 0
Query:   89 AKLQTVNARLLAQIEEQGKGIVI------------------PTEESKKIKRKEEDLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGELDPSPEASG 225
            A   TVN RLLA++E   +G                       EE +K   +  +LNGVNP  A+ GA  A  M+   W  T +L   + + P  +    A  R T+  + AV+GL +L +G  GVT LG+ ++   VA GVA GELDP+P   G
Sbjct:  117 ASTNTVNERLLAELEAAQEGTKYGKRSKLGQKIGAAFRSERTDEERQKSIEEARNLNGVNPLVALGGAVFALGMAALLWSGTGFLGDWFLTHPVGDDAPYAFVRATAVFRNAVMGLSSLASGFAGVTGLGLFLLGVRVAYGVATGELDPTPIKKG 271          
BLAST of mRNA_Ecto-sp13_S_contig6685.17558.1 vs. uniprot
Match: A0A4D9CX59_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX59_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.650e-9
Identity = 63/172 (36.63%), Postives = 86/172 (50.00%), Query Frame = 0
Query:   48 SGARPLAASVPNGIGEGKRVGFASGLEEXXXXXXAADGEPKAKLQTVNARLLAQIEEQGKGIVI-PTEESKKIKRKEEDLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGELD 218
            SG RP+A   PN  G GK  G  S                +AK  TVN RL+  I+ +  G+     EE+  +  ++ DLNG+NP   +  A  AA +SF  W+ T  LA A  +   + +D     R+      A VG+ ALGAG+ GVTA+G+  +AA V  GV  GELD
Sbjct:  139 SGPRPVA---PNSAG-GKGFGPTS-------------TPTRAKTGTVNKRLMNVIDAELDGVRDRQPEEATPLSEEDTDLNGINPVQPLGAAMFAAFISFLFWRITFGLAGALNNVHLD-TDFYPAQRVFGIASTAFVGITALGAGVIGVTAIGLLGLAARVTFGVVSGELD 292          
BLAST of mRNA_Ecto-sp13_S_contig6685.17558.1 vs. uniprot
Match: A0A2V3IZV8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZV8_9FLOR)

HSP 1 Score: 60.1 bits (144), Expect = 6.130e-7
Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = 0
Query:   92 QTVNARLLAQIEEQGKGIVIPTEESKKIKRKEE--DLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGEL 217
            QT N R+L Q+ +  + + +         R     D++ VNPF  ++GA GAA +S+  W A  ++A  + S P ++  I  V R+++ ++  +V LFALG+GI GVT+LG+ ++    A G   GE 
Sbjct:  138 QTPNKRVLQQVRDTMQRLGVEEHPQTPSPRPFSPIDISSVNPFSPLVGAFGAAFISYAVWSALGYIAFFFASHPLDD-QIYVVQRLSAVVRTGLVCLFALGSGISGVTSLGLFLLFGRTAYGTLSGEF 264          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6685.17558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FJR5_ECTSI1.730e-15493.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1UHH8_9STRA4.270e-1640.94Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4B5P2_CHRCT6.960e-1136.96Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4N355_9STRA9.210e-1034.84Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A4D9CX59_9STRA2.650e-936.63Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A2V3IZV8_9FLOR6.130e-733.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 236..264
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 213..264
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 184..212
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.735
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 183..205
IPR021434Protein of unknown function DUF3082PFAMPF11282DUF3082coord: 129..205
e-value: 4.5E-16
score: 58.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6685contigEcto-sp13_S_contig6685:3475..6902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6685.17558.1mRNA_Ecto-sp13_S_contig6685.17558.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6685 3475..7613 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6685.17558.1 ID=prot_Ecto-sp13_S_contig6685.17558.1|Name=mRNA_Ecto-sp13_S_contig6685.17558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=265bp
MGTLRALVGFLALIGANKVLSFVPGGQLNVARSSRRVDRLSWSITRCSGA
RPLAASVPNGIGEGKRVGFASGLEEEEEEEEAADGEPKAKLQTVNARLLA
QIEEQGKGIVIPTEESKKIKRKEEDLNGVNPFYAILGAGGAAAMSFGSWK
ATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALG
MGVMAAIVAVGVAKGELDPSPEASGSKTAAPGASEEEKELLMLQQADESL
RKAQEEIERKVGKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021434DUF3082