prot_Ecto-sp13_S_contig6685.17557.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6685.17557.1
Unique Nameprot_Ecto-sp13_S_contig6685.17557.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6685.17557.1 vs. uniprot
Match: A0A6H5KJI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI1_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 2.400e-73
Identity = 124/150 (82.67%), Postives = 131/150 (87.33%), Query Frame = 0 
Query:    1 RQQRHHKGSGLSLGDLKSGDKGIDGSGGLGNGLGSLPSKEAMASKGLEAKVDMATYGHQSWALTNLGAWRSRSLGASGEGKPAEFVKSRQREAKRAMLGAAVAAAA---AGPGAAPTNSTVVEERADRPVPMVVPAKPPEEMGRSAMVIE 147
            ++QRHH+G GLS GDLK+GD  IDGS GLGN LGSLPSKEAMASKGLEAKVDMATYGHQSWALTNLGAWRS+SLGASG GKPA+FVKSRQREAKRAMLG A         GPGAAPTN+TVVEE ADRPV MVVPAKPPEEMGRSAMVIE
Sbjct:    5 KKQRHHRGCGLSPGDLKTGDDSIDGSVGLGNWLGSLPSKEAMASKGLEAKVDMATYGHQSWALTNLGAWRSQSLGASGGGKPADFVKSRQREAKRAMLGTAAXXXXXXXTGPGAAPTNATVVEEGADRPVLMVVPAKPPEEMGRSAMVIE 154
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6685.17557.1 vs. uniprot
Match: D7FJR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJR6_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 2.120e-19
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 0 
Query:    1 RQQRHHKGSGLSLGDLKSGDKGIDGSGGLGNGLGSLPSKEAMASKGLEAK 50
            ++QRHHKGSGLS GDLKSGD  IDGSGGLGNGLGSLPSKEAMASKGLEAK
Sbjct:    5 KKQRHHKGSGLSPGDLKSGDNSIDGSGGLGNGLGSLPSKEAMASKGLEAK 54
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6685.17557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJI1_9PHAE2.400e-7382.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJR6_ECTSI2.120e-1990.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6685contigEcto-sp13_S_contig6685:1544..2418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6685.17557.1mRNA_Ecto-sp13_S_contig6685.17557.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6685 1544..2418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6685.17557.1 ID=prot_Ecto-sp13_S_contig6685.17557.1|Name=mRNA_Ecto-sp13_S_contig6685.17557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
RQQRHHKGSGLSLGDLKSGDKGIDGSGGLGNGLGSLPSKEAMASKGLEAK
VDMATYGHQSWALTNLGAWRSRSLGASGEGKPAEFVKSRQREAKRAMLGA
AVAAAAAGPGAAPTNSTVVEERADRPVPMVVPAKPPEEMGRSAMVIE*
back to top