mRNA_Ecto-sp13_S_contig6678.17550.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI) HSP 1 Score: 394 bits (1011), Expect = 9.370e-123 Identity = 224/236 (94.92%), Postives = 227/236 (96.19%), Query Frame = 1
Query: 1 AEYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFGSRERSTTTPSSGSXXXXXXXXXXXXXXXXXXXGIXXXXXXXXXXNSKGLGSEAGSSDSGSGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTETCAFTWATR 708
AEYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFG+R RSTTTPSSGS XXXXXXXXXXXXXXXXXX IXXXXXXX +SKGLGSEAGSSDSG GNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGG DSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTC+GGQLHIWDTNKG HQSNITKYKDVEWSTETCAFTWATR
Sbjct: 633 AEYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFGARNRSTTTPSSGSSXXXXXXXXXXXXXXXXXXXIXXXXXXXNTSSSKGLGSEAGSSDSGGGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGEDSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCKGGQLHIWDTNKGNHQSNITKYKDVEWSTETCAFTWATR 868
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S0XF67_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XF67_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.150e-25 Identity = 49/118 (41.53%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 322 GSGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWS 675
G ++K G FIVLNE D +E RD + I V++SPD +T+ + D N+YLYA + Y+LI +H PVT +DFS DG+W+RS +L+ ++T+ QSNI +D+EW+
Sbjct: 186 GESSSKCGTFIVLNEEDLSFQYETRDTTKAITVVKYSPDGETLAVASEDFNIYLYAVNDEYELIGRCLRHTAPVTHIDFSIDGEWLRSNSSSKELYFFNTDDATFQSNIQSMRDIEWA 303
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S3UWN4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWN4_HETAK) HSP 1 Score: 100 bits (249), Expect = 2.820e-23 Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 1
Query: 355 VLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQ-SNITKYKDVEWSTETCAFTWATR 708
VLN D V+E +DAK+ I ++++SPD + + +G D+N+YLY T + L AT H +T +DF+ DG +RSTC +L WD +G+ + S ++ +D EW T TC TW T+
Sbjct: 1 VLNAPDLTVVWEGKDAKEWISDLKFSPDGNALAVGSHDNNIYLYNTSPEWGLRATLEGHNSYITHLDFTADGAALRSTCGAYELLFWDAAEGEQKPSGASELRDAEWDTTTCPLTWDTQ 119
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S1C976_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C976_9STRA) HSP 1 Score: 101 bits (252), Expect = 5.280e-21 Identity = 54/137 (39.42%), Postives = 77/137 (56.20%), Query Frame = 1
Query: 289 GLGSEAGSSDSGSGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTETCAFTW 699
GLG + G G + K GGFIVLNE+D + +ARDA+Q I ++++SPD T+ LG D+ +YLY + L T AKH +T DFS D I+S C +L +++ G + T +D EW+T TC W
Sbjct: 667 GLGGDVGRGRKGR-DRKDGGFIVLNESDLAVLHQARDARQWISDIKYSPDGHTLALGSHDNKIYLYDVS-TFHLKGTCAKHNSYITHFDFSVDSSTIQSNCGAYELLFFNSETGDQIPSATSLRDKEWATWTCVLGW 801
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A482SXL7_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXL7_9ARCH) HSP 1 Score: 97.4 bits (241), Expect = 1.580e-19 Identity = 39/119 (32.77%), Postives = 73/119 (61.34%), Query Frame = 1
Query: 352 IVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTETCAFTWATR 708
++LNE + RD + +++SPD DT+ + +D ++ Y+ ++Y+L+A A KH V ++DFS DG+++RS +L+ ++ + G HQSNI +DV+W ++ C ++W T+
Sbjct: 708 LILNEESLQILHAMRDGQYPATCLKFSPDGDTLCVASSDGSMLFYSVNDDYELLAKAKKHNEAVIAIDFSVDGEFVRSNSYNHELYFFNVDDGSHQSNIASMRDVQWHSQHCLYSWHTK 826
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S3XN42_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN42_HETAK) HSP 1 Score: 86.3 bits (212), Expect = 7.930e-18 Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 355 VLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQ-SNITKYKDVEWSTETCAFTW 699
VLN D V+E +DAK+ I ++++SPD + + +G D+N+YLY T + L AT H +T +DF+ DG +RSTC +L ++T G+ ++ KDV W+T T W
Sbjct: 1 VLNAPDLTVVWEGKDAKEWISDLKFSPDGNALAVGSHDNNIYLYNTSPEWGLRATLEGHNSYITHLDFTADGAALRSTCGAYELLYFETATGQQNPGGASELKDVAWATWTVPLGW 116
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S2V7Z0_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7Z0_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.450e-17 Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 340 TGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYA--TGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKH-QSNITKYKDVEWSTETCAFTW 699
+GG V A +F+AR AK+ I +V++SPD T+ + D+N+YLY+ +G+ YD KH VT +DFS DG ++RSTC +L + + + ++ KDV W TETC W
Sbjct: 273 SGGLQVFEAASMDNIFKARHAKEWISDVKFSPDAQTLAVASHDNNIYLYSAKSGDAYDFYGRLDKHNSYVTHMDFSSDGQFMRSTCGAYELLFYKVSAAQQLPGGASELKDVAWHTETCPLGW 395
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S2W8N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W8N2_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 5.310e-16 Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 1
Query: 337 KTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTETCAFTW 699
K GG ++L+ V E RDA++ I++ ++SPD T+ + D+ +YLY +NY+L H V +DFS+D ++IRS C G L G ++ + KDV+++T TC W
Sbjct: 453 KDGGVLILDGTSLKLVHETRDAREWIVDAKYSPDGATLAIAAMDNKIYLYDVSKNYELRCKCEGHNSFVMHIDFSEDSEYIRSNCGGYDLLFHKCEDGTVINSPSMLKDVKFTTTTCTLCW 573
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S2FVT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVT9_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 9.760e-14 Identity = 37/105 (35.24%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 367 ADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTE 681
+D V EARD+KQ I ++WSPD T+ + D +YLY G+ + A HK +T +D+S D ++++ST + G+L W+ + G+ ++ T +D+EW T+
Sbjct: 3 SDLTIVQEARDSKQLISSIKWSPDGGTLAVTSYDRAIYLYNVGD-WASTAKCRGHKGRITGLDWSTDANFLQSTDDLGELIFWEADSGEQRTARTM-RDIEWETQ 105
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A1W4WEK8_AGRPL (echinoderm microtubule-associated protein-like 2 isoform X1 n=4 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4WEK8_AGRPL) HSP 1 Score: 80.1 bits (196), Expect = 1.350e-13 Identity = 52/237 (21.94%), Postives = 94/237 (39.66%), Query Frame = 1
Query: 4 EYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFGSRERSTTTPSSGSXXXXXXXXXXXXXXXXXXXGIXXXXXXXXXXNSKGLGSEAGSSDSGSGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYAT---GENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTETCAFTWAT 705
++ATAG D +++WD+++ S+L +D AA + +S DG +++VG +G + V + + D + I +R+SPD V LG D+++Y+Y G + + + H +T +D+S DG +IRS +L W++ + + T +DVEW++ TC T+ T
Sbjct: 645 QFATAGQDKLLQMWDSMSHSILWSKEIDEAAQSLAFSADGNIILVG----------------------------------------------------------------CMSGSWFVYDSQTRELLSHHVDGNEPIQVIRFSPDGGNVALGSRDNHIYIYEISDDGRRFRRVGVCSGHSSFITHLDWSSDGQFIRSNSGDYELLFWNSGTCRQITQSTTLRDVEWASNTCTLTFTT 817 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6678.17550.1 >prot_Ecto-sp13_S_contig6678.17550.1 ID=prot_Ecto-sp13_S_contig6678.17550.1|Name=mRNA_Ecto-sp13_S_contig6678.17550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp AEYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFGSback to top mRNA from alignment at Ecto-sp13_S_contig6678:1685..4446- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6678.17550.1 ID=mRNA_Ecto-sp13_S_contig6678.17550.1|Name=mRNA_Ecto-sp13_S_contig6678.17550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6678:1685..4446- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6678:1685..4446- >mRNA_Ecto-sp13_S_contig6678.17550.1 ID=mRNA_Ecto-sp13_S_contig6678.17550.1|Name=mRNA_Ecto-sp13_S_contig6678.17550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=708bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6678:1685..4446- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |