prot_Ecto-sp13_S_contig6678.17550.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6678.17550.1
Unique Nameprot_Ecto-sp13_S_contig6678.17550.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length236
Homology
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 9.370e-123
Identity = 224/236 (94.92%), Postives = 227/236 (96.19%), Query Frame = 0
Query:    1 AEYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFGSRERSTTTPSSGSXXXXXXXXXXXXXXXXXXXGIXXXXXXXXXXNSKGLGSEAGSSDSGSGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTETCAFTWATR 236
            AEYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFG+R RSTTTPSSGS XXXXXXXXXXXXXXXXXX IXXXXXXX   +SKGLGSEAGSSDSG GNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGG DSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTC+GGQLHIWDTNKG HQSNITKYKDVEWSTETCAFTWATR
Sbjct:  633 AEYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFGARNRSTTTPSSGSSXXXXXXXXXXXXXXXXXXXIXXXXXXXNTSSSKGLGSEAGSSDSGGGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGEDSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCKGGQLHIWDTNKGNHQSNITKYKDVEWSTETCAFTWATR 868          
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S0XF67_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XF67_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.150e-25
Identity = 49/118 (41.53%), Postives = 73/118 (61.86%), Query Frame = 0
Query:  108 GSGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWS 225
            G  ++K G FIVLNE D    +E RD  + I  V++SPD +T+ +   D N+YLYA  + Y+LI    +H  PVT +DFS DG+W+RS     +L+ ++T+    QSNI   +D+EW+
Sbjct:  186 GESSSKCGTFIVLNEEDLSFQYETRDTTKAITVVKYSPDGETLAVASEDFNIYLYAVNDEYELIGRCLRHTAPVTHIDFSIDGEWLRSNSSSKELYFFNTDDATFQSNIQSMRDIEWA 303          
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S3UWN4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWN4_HETAK)

HSP 1 Score: 100 bits (249), Expect = 2.820e-23
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 0
Query:  119 VLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQ-SNITKYKDVEWSTETCAFTWATR 236
            VLN  D   V+E +DAK+ I ++++SPD + + +G  D+N+YLY T   + L AT   H   +T +DF+ DG  +RSTC   +L  WD  +G+ + S  ++ +D EW T TC  TW T+
Sbjct:    1 VLNAPDLTVVWEGKDAKEWISDLKFSPDGNALAVGSHDNNIYLYNTSPEWGLRATLEGHNSYITHLDFTADGAALRSTCGAYELLFWDAAEGEQKPSGASELRDAEWDTTTCPLTWDTQ 119          
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S1C976_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C976_9STRA)

HSP 1 Score: 101 bits (252), Expect = 5.280e-21
Identity = 54/137 (39.42%), Postives = 77/137 (56.20%), Query Frame = 0
Query:   97 GLGSEAGSSDSGSGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTETCAFTW 233
            GLG + G    G  + K GGFIVLNE+D   + +ARDA+Q I ++++SPD  T+ LG  D+ +YLY     + L  T AKH   +T  DFS D   I+S C   +L  +++  G    + T  +D EW+T TC   W
Sbjct:  667 GLGGDVGRGRKGR-DRKDGGFIVLNESDLAVLHQARDARQWISDIKYSPDGHTLALGSHDNKIYLYDVS-TFHLKGTCAKHNSYITHFDFSVDSSTIQSNCGAYELLFFNSETGDQIPSATSLRDKEWATWTCVLGW 801          
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A482SXL7_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXL7_9ARCH)

HSP 1 Score: 97.4 bits (241), Expect = 1.580e-19
Identity = 39/119 (32.77%), Postives = 73/119 (61.34%), Query Frame = 0
Query:  118 IVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTETCAFTWATR 236
            ++LNE     +   RD +     +++SPD DT+ +  +D ++  Y+  ++Y+L+A A KH   V ++DFS DG+++RS     +L+ ++ + G HQSNI   +DV+W ++ C ++W T+
Sbjct:  708 LILNEESLQILHAMRDGQYPATCLKFSPDGDTLCVASSDGSMLFYSVNDDYELLAKAKKHNEAVIAIDFSVDGEFVRSNSYNHELYFFNVDDGSHQSNIASMRDVQWHSQHCLYSWHTK 826          
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S3XN42_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN42_HETAK)

HSP 1 Score: 86.3 bits (212), Expect = 7.930e-18
Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 0
Query:  119 VLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQ-SNITKYKDVEWSTETCAFTW 233
            VLN  D   V+E +DAK+ I ++++SPD + + +G  D+N+YLY T   + L AT   H   +T +DF+ DG  +RSTC   +L  ++T  G+      ++ KDV W+T T    W
Sbjct:    1 VLNAPDLTVVWEGKDAKEWISDLKFSPDGNALAVGSHDNNIYLYNTSPEWGLRATLEGHNSYITHLDFTADGAALRSTCGAYELLYFETATGQQNPGGASELKDVAWATWTVPLGW 116          
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S2V7Z0_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7Z0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.450e-17
Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 0
Query:  114 TGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYA--TGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKH-QSNITKYKDVEWSTETCAFTW 233
            +GG  V   A    +F+AR AK+ I +V++SPD  T+ +   D+N+YLY+  +G+ YD      KH   VT +DFS DG ++RSTC   +L  +  +  +      ++ KDV W TETC   W
Sbjct:  273 SGGLQVFEAASMDNIFKARHAKEWISDVKFSPDAQTLAVASHDNNIYLYSAKSGDAYDFYGRLDKHNSYVTHMDFSSDGQFMRSTCGAYELLFYKVSAAQQLPGGASELKDVAWHTETCPLGW 395          
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S2W8N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W8N2_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.310e-16
Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 0
Query:  113 KTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTETCAFTW 233
            K GG ++L+      V E RDA++ I++ ++SPD  T+ +   D+ +YLY   +NY+L      H   V  +DFS+D ++IRS C G  L       G   ++ +  KDV+++T TC   W
Sbjct:  453 KDGGVLILDGTSLKLVHETRDAREWIVDAKYSPDGATLAIAAMDNKIYLYDVSKNYELRCKCEGHNSFVMHIDFSEDSEYIRSNCGGYDLLFHKCEDGTVINSPSMLKDVKFTTTTCTLCW 573          
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A7S2FVT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVT9_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 9.760e-14
Identity = 37/105 (35.24%), Postives = 63/105 (60.00%), Query Frame = 0
Query:  123 ADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTE 227
            +D   V EARD+KQ I  ++WSPD  T+ +   D  +YLY  G+ +   A    HK  +T +D+S D ++++ST + G+L  W+ + G+ ++  T  +D+EW T+
Sbjct:    3 SDLTIVQEARDSKQLISSIKWSPDGGTLAVTSYDRAIYLYNVGD-WASTAKCRGHKGRITGLDWSTDANFLQSTDDLGELIFWEADSGEQRTARTM-RDIEWETQ 105          
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Match: A0A1W4WEK8_AGRPL (echinoderm microtubule-associated protein-like 2 isoform X1 n=4 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4WEK8_AGRPL)

HSP 1 Score: 80.1 bits (196), Expect = 1.350e-13
Identity = 52/237 (21.94%), Postives = 94/237 (39.66%), Query Frame = 0
Query:    2 EYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFGSRERSTTTPSSGSXXXXXXXXXXXXXXXXXXXGIXXXXXXXXXXNSKGLGSEAGSSDSGSGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTVVLGGADSNLYLYAT---GENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGGQLHIWDTNKGKHQSNITKYKDVEWSTETCAFTWAT 235
            ++ATAG D  +++WD+++ S+L    +D AA  + +S DG +++VG                                                                  +G + V +      +    D  + I  +R+SPD   V LG  D+++Y+Y     G  +  +   + H   +T +D+S DG +IRS     +L  W++   +  +  T  +DVEW++ TC  T+ T
Sbjct:  645 QFATAGQDKLLQMWDSMSHSILWSKEIDEAAQSLAFSADGNIILVG----------------------------------------------------------------CMSGSWFVYDSQTRELLSHHVDGNEPIQVIRFSPDGGNVALGSRDNHIYIYEISDDGRRFRRVGVCSGHSSFITHLDWSSDGQFIRSNSGDYELLFWNSGTCRQITQSTTLRDVEWASNTCTLTFTT 817          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6678.17550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR21_ECTSI9.370e-12394.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0XF67_9STRA1.150e-2541.53Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
A0A7S3UWN4_HETAK2.820e-2339.50Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1C976_9STRA5.280e-2139.42Hypothetical protein n=2 Tax=Bicosoecida sp. CB-20... [more]
A0A482SXL7_9ARCH1.580e-1932.77EF-hand domain-containing protein n=1 Tax=archaeon... [more]
A0A7S3XN42_HETAK7.930e-1837.07Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2V7Z0_9STRA1.450e-1737.40Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S2W8N2_9STRA5.310e-1633.88Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A7S2FVT9_9STRA9.760e-1435.24Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A1W4WEK8_AGRPL1.350e-1321.94echinoderm microtubule-associated protein-like 2 i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 122..163
e-value: 9.6
score: 10.8
coord: 167..206
e-value: 1.7E-4
score: 30.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 4..16
e-value: 0.052
score: 14.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..25
score: 10.375
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 174..215
score: 10.442
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..51
e-value: 2.0E-10
score: 41.8
coord: 113..235
e-value: 7.6E-27
score: 96.0
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 142..221
e-value: 6.4E-6
score: 26.4
NoneNo IPR availablePANTHERPTHR13720:SF33ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 6coord: 2..230
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 2..230
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..25
score: 10.047
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 131..215
score: 12.974
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6678contigEcto-sp13_S_contig6678:1686..4446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6678.17550.1mRNA_Ecto-sp13_S_contig6678.17550.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6678 1685..4446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6678.17550.1 ID=prot_Ecto-sp13_S_contig6678.17550.1|Name=mRNA_Ecto-sp13_S_contig6678.17550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
AEYATAGSDGTVRIWDALTRSLLRMTRLDSAASCVDYSPDGELLIVGFGS
RERSTTTPSSGSSTTESSTAKSGSSASKGRRGIGGGSGKNNTSNSKGLGS
EAGSSDSGSGNAKTGGFIVLNEADFITVFEARDAKQGIIEVRWSPDRDTV
VLGGADSNLYLYATGENYDLIATAAKHKHPVTSVDFSKDGDWIRSTCEGG
QLHIWDTNKGKHQSNITKYKDVEWSTETCAFTWATR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR024977Apc4_WD40_dom
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf