mRNA_Ecto-sp13_S_contig6639.17497.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig6639.17497.1
Unique Name	mRNA_Ecto-sp13_S_contig6639.17497.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A6H5L275_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L275_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 5.060e-119
Identity = 177/197 (89.85%), Postives = 181/197 (91.88%), Query Frame = 1

Query:   16 GASGSTPEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACV---------------SDGQRRRVQLLLGLVKPFKLLLLD 561
            GASGSTP+ AGSAVVVTKLDFTYDGMDKPVLK+FDL+LPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLN+LGVDPNWRMHQASKTHEACV               SDGQRRRVQLLLGLVKPFKLLLLD
Sbjct:   33 GASGSTPDTAGSAVVVTKLDFTYDGMDKPVLKQFDLNLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNMLGVDPNWRMHQASKTHEACVILHVDTFMCCRSVCVSDGQRRRVQLLLGLVKPFKLLLLD 229

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BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A835ZJB2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJB2_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.300e-74
Identity = 119/176 (67.61%), Postives = 135/176 (76.70%), Query Frame = 1

Query:   34 PEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 561
            P+  G AV +  L F YD    P LK F+L LP GSRCLLIGQNGAGKSTLLR++ GRH+ KPD+AV+VL +HAFRDT LN  RS+L MDWGMRT+SFAG+GVPLQADIAV +MM K Q   PERR+EL  LLGVDP WRMHQ        VSDGQRRRVQLLLGLV+PF +LLLD
Sbjct:    6 PQEEGIAVTIDNLTFKYDQAPSPTLKGFNLSLPKGSRCLLIGQNGAGKSTLLRVVGGRHLAKPDNAVVVLGRHAFRDTKLNMVRSYLDMDWGMRTVSFAGYGVPLQADIAVKNMMAKMQAENPERRDELTELLGVDPEWRMHQ--------VSDGQRRRVQLLLGLVRPFDILLLD 173

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BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A4D9D643_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D643_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.800e-66
Identity = 109/176 (61.93%), Postives = 134/176 (76.14%), Query Frame = 1

Query:   34 PEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 561
            P +   AV++  L+F+Y   D+PVLK  ++ L  GSRCLLIG NGAGKSTLLR+L GRH+TKPDDAV V+  HAFRDT LN  R+++  DWGMRT++FAG+GVPLQADI V  MM K Q ++PERR+ELL LLG+DP WRM++        VSDGQRRRVQL LGLV+PF +LLLD
Sbjct:   18 PFLPDDAVLIRDLNFSYG--DRPVLKGINMRLKRGSRCLLIGANGAGKSTLLRILGGRHLTKPDDAVTVMGMHAFRDTKLNLIRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNR--------VSDGQRRRVQLFLGLVRPFDILLLD 183

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BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: D8LIU8_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU8_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 6.960e-65
Identity = 100/110 (90.91%), Postives = 103/110 (93.64%), Query Frame = 1

Query:   16 GASGSTPEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVP 345
            GASGSTP+ AGSAVVVTKLDFTYDGMDKPVL+KFDLDLP GSRCLLIGQNGAGKSTLLRLLAGRHITKPD+AVIVLDKHAFRDT LNKHRSFLSMDWGMRTISFA    P
Sbjct:    5 GASGSTPDTAGSAVVVTKLDFTYDGMDKPVLRKFDLDLPKGSRCLLIGQNGAGKSTLLRLLAGRHITKPDEAVIVLDKHAFRDTILNKHRSFLSMDWGMRTISFAEQNQP 114

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BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A7S3M0C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M0C2_9STRA)

HSP 1 Score: 207 bits (526), Expect = 7.660e-65
Identity = 107/182 (58.79%), Postives = 133/182 (73.08%), Query Frame = 1

Query:   19 ASGSTPEIAGSAVVVTK-LDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 561
            A+G+  + A    +  K L F Y G + PVL+  ++ L  G+RCLLIG NGAGKST+LR+L+GRH+TKPD AV VL + AF DT LN  RS+L  DWGMRT++FAG+G PLQADI V  MM+K Q  YPERR+EL+ LLG+DP WRMHQ        VSDGQRRRVQ+ LGL++PFK+LLLD
Sbjct:   10 ANGNQADAAAPLHIDVKDLTFGYVGRE-PVLRHLNMQLTNGARCLLIGANGAGKSTILRILSGRHLTKPDGAVQVLGRSAFHDTRLNFERSYLDTDWGMRTVAFAGYGCPLQADIPVYSMMEKLQAEYPERRDELIKLLGIDPQWRMHQ--------VSDGQRRRVQIFLGLIRPFKILLLD 182

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BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A7R9ZBK7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBK7_9STRA)

HSP 1 Score: 209 bits (532), Expect = 8.160e-64
Identity = 109/178 (61.24%), Postives = 133/178 (74.72%), Query Frame = 1

Query:   28 STPEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 561
            S P+   +A+ V  L F+YD    PVL+ FDL L TGSRCLLIG NGAGKSTLLR+LAGRH+ K D+ V VL  +AFRDT LN HR++L  DWGMRT++FAG GVPL ADI V  MM K Q  YPERR+EL+ +LG+D +WRMHQ        +SDGQRRRVQ+L+GL++PFK+LLLD
Sbjct:   21 SIPDYGSNAIEVNNLTFSYDNAS-PVLRDFDLTLETGSRCLLIGANGAGKSTLLRVLAGRHLPK-DENVRVLGLNAFRDTRLNFHRAYLDCDWGMRTVAFAGAGVPLMADIPVHKMMDKLQRSYPERRDELVEMLGIDLDWRMHQ--------LSDGQRRRVQILIGLIRPFKVLLLD 188

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BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A7S3PTX2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTX2_9STRA)

HSP 1 Score: 205 bits (521), Expect = 2.650e-62
Identity = 104/179 (58.10%), Postives = 131/179 (73.18%), Query Frame = 1

Query:   28 STPEIAGSAVVVTKLDFTYDGMDKPV-LKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 561
            + P+   +A+ V  L F YD     V L    L LPTGSRCLLIG NG+GKSTL+R+LAGRH+TK D+ + VL  +AFRDT LN HR++L  DWG+RT++FAG GVPL ADI V  MM+K Q+ YPERR+EL+ +LG+D  WRMHQ        +SDGQRRRVQLL+GL++PFK+LLLD
Sbjct:   16 TVPDYGENAIEVDGLTFAYDSNPNAVILNDLSLALPTGSRCLLIGANGSGKSTLMRILAGRHLTKADNEIKVLGLNAFRDTKLNFHRAYLDCDWGLRTVAFAGTGVPLMADIPVHQMMEKLQKSYPERRDELVEMLGIDLQWRMHQ--------LSDGQRRRVQLLIGLIRPFKVLLLD 186

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BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A7S2RIN8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RIN8_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.750e-62
Identity = 105/171 (61.40%), Postives = 130/171 (76.02%), Query Frame = 1

Query:   52 AVVVTKLDFTYDGMD-KPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 561
            ++ V  L FTYD    K +LK  +L+L TGSRCLLIG NG+GKSTLLR+LAGRH++ PD  V VL  +AFRDT LN HR++L  DWGMRT++FAG GVPL ADI V  MM++ Q+ YPERR+EL+ LLG+D  WRMHQ        +SDGQRRRVQLL+GL++PFK+LLLD
Sbjct:   53 SIEVNDLTFTYDSRKGKRILKNLNLNLETGSRCLLIGANGSGKSTLLRILAGRHLSSPDGNVKVLGLNAFRDTKLNFHRAYLDCDWGMRTVAFAGCGVPLMADIPVYKMMERLQQTYPERRDELVELLGIDLRWRMHQ--------LSDGQRRRVQLLIGLIRPFKVLLLD 215

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BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: B8C780_THAPS (ABC transporter domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C780_THAPS)

HSP 1 Score: 202 bits (514), Expect = 3.530e-61
Identity = 101/177 (57.06%), Postives = 129/177 (72.88%), Query Frame = 1

Query:   34 PEIAGSAVVVTKLDFTYDGMD-KPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 561
            P  A  A+ +T L F+YD    KP L+  +L LP GSRCLLIG NG+GKSTLLRL++GRH+ KP+  + VL  ++FRDT LN HR++L   WG++T++FAG GVPL ADI V  MM+K Q  YPERR+EL+ +LG+DPNWRMH         +SDGQRRRVQLL+ LV+PF +LLLD
Sbjct:   20 PYDANKAISITDLTFSYDPSTLKPTLENLNLQLPQGSRCLLIGANGSGKSTLLRLISGRHLAKPEGCITVLGLNSFRDTRLNFHRAYLETGWGLQTVAFAGCGVPLMADIPVFKMMEKLQNAYPERRDELIEMLGIDPNWRMHM--------LSDGQRRRVQLLIQLVRPFTILLLD 188

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BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A812WKF7_SYMMI (ABCI20 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WKF7_SYMMI)

HSP 1 Score: 194 bits (493), Expect = 7.310e-60
Identity = 97/167 (58.08%), Postives = 124/167 (74.25%), Query Frame = 1

Query:   61 VTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 561
            +T L+F Y    K VLK  ++ L  G+RCLLIG NGAGKST+LR+LAG+H+ KP ++V+VL +  F D +LN  R++L  DWGMRT++FAG+G PLQADI V  MMKK Q  YPERREEL+ +LG+D NWRMH         VSDGQRRRVQ+ +GL++PFK+LLLD
Sbjct:   14 ITGLNFAYPDQ-KLVLKDLNMHLTRGARCLLIGANGAGKSTMLRILAGKHLIKPPESVLVLGRETFYDRSLNFERAYLDTDWGMRTVAFAGYGCPLQADIPVHAMMKKLQSDYPERREELIKMLGIDINWRMHM--------VSDGQRRRVQIFIGLLRPFKILLLD 171

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L275_9PHAE	5.060e-119	89.85	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A835ZJB2_9STRA	2.300e-74	67.61	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A4D9D643_9STRA	1.800e-66	61.93	ABC transporter domain-containing protein n=2 Tax=...	[more]
D8LIU8_ECTSI	6.960e-65	90.91	ABC transporter domain-containing protein n=1 Tax=...	[more]
A0A7S3M0C2_9STRA	7.660e-65	58.79	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A7R9ZBK7_9STRA	8.160e-64	61.24	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A7S3PTX2_9STRA	2.650e-62	58.10	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S2RIN8_9STRA	2.750e-62	61.40	Hypothetical protein (Fragment) n=1 Tax=Eucampia a...	[more]
B8C780_THAPS	3.530e-61	57.06	ABC transporter domain-containing protein n=1 Tax=...	[more]
A0A812WKF7_SYMMI	7.310e-60	58.08	ABCI20 protein n=1 Tax=Symbiodinium microadriaticu...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6639	contig	Ecto-sp13_S_contig6639:5525..8090 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	1
Seed ortholog score	204.5
Seed ortholog evalue	4.2e-50
Seed eggNOG ortholog	2880.D8LIU8
Preferred name	CAF16
Model size	561
KEGG ko	ko:K12608
KEGG Pathway	ko03018,map03018
Hectar predicted targeting category	other localisation
GOs	GO:0000166,GO:0000288,GO:0000289,GO:0000956,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006368,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0030014,GO:0030015,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:1901265,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141
Exons	5
EggNOG free text desc.	ATPase activity
EggNOG OGs	COG4586@1,KOG2355@2759
Cds size	561
COG Functional cat.	L
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03019

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681463913.888044-CDS-Ecto-sp13_S_contig6639:5524..5667	1681463913.888044-CDS-Ecto-sp13_S_contig6639:5524..5667	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6639 5525..5667 +
1681463913.9092195-CDS-Ecto-sp13_S_contig6639:6063..6168	1681463913.9092195-CDS-Ecto-sp13_S_contig6639:6063..6168	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6639 6064..6168 +
1681463913.9210968-CDS-Ecto-sp13_S_contig6639:6744..6827	1681463913.9210968-CDS-Ecto-sp13_S_contig6639:6744..6827	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6639 6745..6827 +
1681463913.93014-CDS-Ecto-sp13_S_contig6639:7478..7633	1681463913.93014-CDS-Ecto-sp13_S_contig6639:7478..7633	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6639 7479..7633 +
1681463913.9390104-CDS-Ecto-sp13_S_contig6639:8015..8090	1681463913.9390104-CDS-Ecto-sp13_S_contig6639:8015..8090	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6639 8016..8090 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6639.17497.1	prot_Ecto-sp13_S_contig6639.17497.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig6639 5525..8090 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig6639:5525..8090+
coding sequence from alignment at Ecto-sp13_S_contig6639:5525..8090+

protein sequence of mRNA_Ecto-sp13_S_contig6639.17497.1

>prot_Ecto-sp13_S_contig6639.17497.1 ID=prot_Ecto-sp13_S_contig6639.17497.1|Name=mRNA_Ecto-sp13_S_contig6639.17497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
MLVFLGASGSTPEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCL
LIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSM
DWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNW
RMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD

mRNA from alignment at Ecto-sp13_S_contig6639:5525..8090+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig6639.17497.1 ID=mRNA_Ecto-sp13_S_contig6639.17497.1|Name=mRNA_Ecto-sp13_S_contig6639.17497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2566bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6639:5525..8090+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCGTTTTTTTAGGCGCAAGTGGATCCACACCAGAGATTGCCGGTTC
AGCGGTGGTGGTGACCAAGCTAGACTTTACGTATGACGGCATGGACAAGC
CGGTGCTCAAGAAGTTCGACCTTGACCTGCCCACAGGAAGCAGGTATACA
TCGGACGGATGCCTTGGCTGGCGTTGGTGATGATGATGCCGCTACAGATT
ATGGTGGTTGTCGCTGCGGAGAGCATGCTACGTGGGTGTCGTGATCGTGA
TATGCCGCCCGCGGAAGCGTTTGTAGCCACGGTTTGCCACTAACCGTTAA
GAACAAGGAGCACGGTCAGATCAGGTCTTCCATGAGTTCTCATCCATGCT
ATGTGCGCCACTTATCCTGAGTTAATTCTGCTCTTTGTTTTGTATTGGAA
GTTTACGTTTGGTTTTGCCGCGAGCGTATCTCTCCTATGCACGACCGGAA
AAGGATACCCCAAACACCTACCCTCGAACGGACTTCCTTGCGGTCTGACT
GATCATGCAGTCAAATCGAACCGTTGGATCATGTTACAGGTGTCTTCTGA
TCGGACAAAACGGCGCGGGCAAGAGCACGCTCTTGCGCTTGCTGGCGGGG
AGGCATATCACCAAGCCCGACGACGCGGTGATTGTACTTGACAAGTGAGC
AAACCAAGACTTCGTACAAAACGTTTCCACATCAAAACTTAATTTTGGCA
TGTGCTATCGTACTACCTCAAATAAATGGAAAACAAATGATTATGCAGTG
GTTTCCACATTGTCGCTTCGTTCCAGCATGTGTTGGCTTTTCGATGGCTC
TGTGTGCAAGAGGCGTCAGCGAACGAACCTGTCATTTCAACGATCGTCAT
CGGACCGGGCTTACCCCTATTCTCCGGTCTATGTATAGACCACAAGTGTT
TCCGTCGCGTTTGTTGTGTGAAGAATCGGTCGGAGAAAGGCTTCGCCCTC
GGCGGGTTCAACGTGCTTTATTCCAGGTGTATACTCTGTGAATGTATGAA
TTCTGCACATTGTCCGGGCGTGAGTCTCCGATTGCACGCCGTTCACGGCT
GCCCTTTCACGTTTCCCTATCGGTGCGAGGAGCTTATGCTAGCCTTGAGT
GGTGGGCACCTTCATGACTAGTGTGCTCCACTGTTTTGGTCGATAAGACA
TTCCCCCGCTAAGTATCTTCATCCGACCGTGGTCACGATTTTCCCGCTTG
CGTTGCGATCTGCTCCACAGGCACGCGTTCCGGGATACTACCCTCAACAA
GCACAGGTCCTTCTTGTCCATGGACTGGGGCATGCGCACCATCTCCTTCG
CGGGTGAGAGAAGGGTTCTGTTGGGTGGCGACAGCGGAGGACGTACAGCA
CGTTTCTGCGTTTTTTGTCGCTCATGTGCGTACATGTGTTGTAGAGTAGG
CCTTATCAATAGTCCGCGAAGACAAGGTTTGATTTCTTGTTCACGTGTGA
AATTCCCAGAATCTGGAATTGTTTTGTCACAGAGGCACTCCCGTGGCACG
TTGCTGTTGCGTTTCCTACGAGTCTGCGCGCGACACAACCAAGTAAACGA
TCATGTGCTTGACCCTTTGGTTTTGGTTGATGACATAAGAGCAGAACTGG
CCCTAAGCCGGAACCGAACAGTGGATACTCACACATGAGTCGTTGCACCA
CGGAGATTGTCTTTTATTGTAGGATATTCCCCTGACAAGGCCCTGGTGTC
ATACTGATTCGTTTATGAACAAGGCAGGTTAGGTCAGACCAAACATGGCA
GCAACATGCGGGGGATAGTTTGAGGTGGAAACAATCAATGCTAAACCTGC
CGAACAACTAACGAATTGTTCTGTAACGCGAAACCGGCGCATGAATCATG
TTTGTTGACTTGATCACGGCCACACCACTCCTGATCAACAACAATATTCC
CACCCGTTGAAAGTCAAATCATGTTGATCTTGTGGATGTGTTCTTCTTTG
GCAGGACATGGGGTTCCACTCCAAGCGGACATTGCCGTGGGTGACATGAT
GAAGAAGGACCAGGAGCGGTACCCGGAGCGGAGAGAGGAGTTGCTTAACC
TGCTCGGCGTCGACCCGAACTGGAGGATGCACCAGGCAAGCAAGACACAT
GAGGCGTGCGTGATCGTACATGTTGACACGTGTATGTGCTGCGTTTCTGA
GTTCTCAAACTGTTGATGTCTTTGTCTCAGCTTGCTTTGTTGTGCCTTGG
TCACTGCTGCGCTGGTTCTTTGTTTCTTCCTTCTCACACAAGCTCCTGGG
AGAAGCCTAGCCCAGGGCCATATACGCGAAGGGCCTTACAGCTATTGATA
CGTCATTTGAGTCAAATATTTAGCGTCGACCTTGCCAGCATGTTGACAAG
CCGGGACCCGGCGACCCATGGGTACGTCGACGGAAAAGCTCGTACTTTCT
CGTGGGTTGTTTCCTCTCCACCATGATGTTTCTTTTTGAACAACACTGCG
ATTGTTTCCCCGCCACCATGCCGTTTCTTTTGGAAGGGCAGGTTTCTGAC
GGACAGAGGAGGAGGGTCCAGCTCCTGCTCGGCCTGGTGAAGCCGTTCAA
GCTCCTCCTGCTTGAT

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6639:5525..8090+

>mRNA_Ecto-sp13_S_contig6639.17497.1 ID=mRNA_Ecto-sp13_S_contig6639.17497.1|Name=mRNA_Ecto-sp13_S_contig6639.17497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=561bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6639:5525..8090+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCGTTTTTTTAGGCGCAAGTGGATCCACACCAGAGATTGCCGGTTC
AGCGGTGGTGGTGACCAAGCTAGACTTTACGTATGACGGCATGGACAAGC
CGGTGCTCAAGAAGTTCGACCTTGACCTGCCCACAGGAAGCAGGTGTCTT
CTGATCGGACAAAACGGCGCGGGCAAGAGCACGCTCTTGCGCTTGCTGGC
GGGGAGGCATATCACCAAGCCCGACGACGCGGTGATTGTACTTGACAAGC
ACGCGTTCCGGGATACTACCCTCAACAAGCACAGGTCCTTCTTGTCCATG
GACTGGGGCATGCGCACCATCTCCTTCGCGGGACATGGGGTTCCACTCCA
AGCGGACATTGCCGTGGGTGACATGATGAAGAAGGACCAGGAGCGGTACC
CGGAGCGGAGAGAGGAGTTGCTTAACCTGCTCGGCGTCGACCCGAACTGG
AGGATGCACCAGGCAAGCAAGACACATGAGGCGTGCGTTTCTGACGGACA
GAGGAGGAGGGTCCAGCTCCTGCTCGGCCTGGTGAAGCCGTTCAAGCTCC
TCCTGCTTGAT