prot_Ecto-sp13_S_contig6639.17497.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6639.17497.1
Unique Nameprot_Ecto-sp13_S_contig6639.17497.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length187
Homology
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A6H5L275_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L275_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 5.060e-119
Identity = 177/197 (89.85%), Postives = 181/197 (91.88%), Query Frame = 0
Query:    6 GASGSTPEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACV---------------SDGQRRRVQLLLGLVKPFKLLLLD 187
            GASGSTP+ AGSAVVVTKLDFTYDGMDKPVLK+FDL+LPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLN+LGVDPNWRMHQASKTHEACV               SDGQRRRVQLLLGLVKPFKLLLLD
Sbjct:   33 GASGSTPDTAGSAVVVTKLDFTYDGMDKPVLKQFDLNLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNMLGVDPNWRMHQASKTHEACVILHVDTFMCCRSVCVSDGQRRRVQLLLGLVKPFKLLLLD 229          
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A835ZJB2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJB2_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.300e-74
Identity = 119/176 (67.61%), Postives = 135/176 (76.70%), Query Frame = 0
Query:   12 PEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 187
            P+  G AV +  L F YD    P LK F+L LP GSRCLLIGQNGAGKSTLLR++ GRH+ KPD+AV+VL +HAFRDT LN  RS+L MDWGMRT+SFAG+GVPLQADIAV +MM K Q   PERR+EL  LLGVDP WRMHQ        VSDGQRRRVQLLLGLV+PF +LLLD
Sbjct:    6 PQEEGIAVTIDNLTFKYDQAPSPTLKGFNLSLPKGSRCLLIGQNGAGKSTLLRVVGGRHLAKPDNAVVVLGRHAFRDTKLNMVRSYLDMDWGMRTVSFAGYGVPLQADIAVKNMMAKMQAENPERRDELTELLGVDPEWRMHQ--------VSDGQRRRVQLLLGLVRPFDILLLD 173          
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A4D9D643_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D643_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.800e-66
Identity = 109/176 (61.93%), Postives = 134/176 (76.14%), Query Frame = 0
Query:   12 PEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 187
            P +   AV++  L+F+Y   D+PVLK  ++ L  GSRCLLIG NGAGKSTLLR+L GRH+TKPDDAV V+  HAFRDT LN  R+++  DWGMRT++FAG+GVPLQADI V  MM K Q ++PERR+ELL LLG+DP WRM++        VSDGQRRRVQL LGLV+PF +LLLD
Sbjct:   18 PFLPDDAVLIRDLNFSYG--DRPVLKGINMRLKRGSRCLLIGANGAGKSTLLRILGGRHLTKPDDAVTVMGMHAFRDTKLNLIRAYMDTDWGMRTVAFAGYGVPLQADIPVTGMMSKLQSQHPERRDELLELLGIDPEWRMNR--------VSDGQRRRVQLFLGLVRPFDILLLD 183          
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: D8LIU8_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU8_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 6.960e-65
Identity = 100/110 (90.91%), Postives = 103/110 (93.64%), Query Frame = 0
Query:    6 GASGSTPEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVP 115
            GASGSTP+ AGSAVVVTKLDFTYDGMDKPVL+KFDLDLP GSRCLLIGQNGAGKSTLLRLLAGRHITKPD+AVIVLDKHAFRDT LNKHRSFLSMDWGMRTISFA    P
Sbjct:    5 GASGSTPDTAGSAVVVTKLDFTYDGMDKPVLRKFDLDLPKGSRCLLIGQNGAGKSTLLRLLAGRHITKPDEAVIVLDKHAFRDTILNKHRSFLSMDWGMRTISFAEQNQP 114          
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A7S3M0C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M0C2_9STRA)

HSP 1 Score: 207 bits (526), Expect = 7.660e-65
Identity = 107/182 (58.79%), Postives = 133/182 (73.08%), Query Frame = 0
Query:    7 ASGSTPEIAGSAVVVTK-LDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 187
            A+G+  + A    +  K L F Y G + PVL+  ++ L  G+RCLLIG NGAGKST+LR+L+GRH+TKPD AV VL + AF DT LN  RS+L  DWGMRT++FAG+G PLQADI V  MM+K Q  YPERR+EL+ LLG+DP WRMHQ        VSDGQRRRVQ+ LGL++PFK+LLLD
Sbjct:   10 ANGNQADAAAPLHIDVKDLTFGYVGRE-PVLRHLNMQLTNGARCLLIGANGAGKSTILRILSGRHLTKPDGAVQVLGRSAFHDTRLNFERSYLDTDWGMRTVAFAGYGCPLQADIPVYSMMEKLQAEYPERRDELIKLLGIDPQWRMHQ--------VSDGQRRRVQIFLGLIRPFKILLLD 182          
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A7R9ZBK7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBK7_9STRA)

HSP 1 Score: 209 bits (532), Expect = 8.160e-64
Identity = 109/178 (61.24%), Postives = 133/178 (74.72%), Query Frame = 0
Query:   10 STPEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 187
            S P+   +A+ V  L F+YD    PVL+ FDL L TGSRCLLIG NGAGKSTLLR+LAGRH+ K D+ V VL  +AFRDT LN HR++L  DWGMRT++FAG GVPL ADI V  MM K Q  YPERR+EL+ +LG+D +WRMHQ        +SDGQRRRVQ+L+GL++PFK+LLLD
Sbjct:   21 SIPDYGSNAIEVNNLTFSYDNAS-PVLRDFDLTLETGSRCLLIGANGAGKSTLLRVLAGRHLPK-DENVRVLGLNAFRDTRLNFHRAYLDCDWGMRTVAFAGAGVPLMADIPVHKMMDKLQRSYPERRDELVEMLGIDLDWRMHQ--------LSDGQRRRVQILIGLIRPFKVLLLD 188          
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A7S3PTX2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTX2_9STRA)

HSP 1 Score: 205 bits (521), Expect = 2.650e-62
Identity = 104/179 (58.10%), Postives = 131/179 (73.18%), Query Frame = 0
Query:   10 STPEIAGSAVVVTKLDFTYDGMDKPV-LKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 187
            + P+   +A+ V  L F YD     V L    L LPTGSRCLLIG NG+GKSTL+R+LAGRH+TK D+ + VL  +AFRDT LN HR++L  DWG+RT++FAG GVPL ADI V  MM+K Q+ YPERR+EL+ +LG+D  WRMHQ        +SDGQRRRVQLL+GL++PFK+LLLD
Sbjct:   16 TVPDYGENAIEVDGLTFAYDSNPNAVILNDLSLALPTGSRCLLIGANGSGKSTLMRILAGRHLTKADNEIKVLGLNAFRDTKLNFHRAYLDCDWGLRTVAFAGTGVPLMADIPVHQMMEKLQKSYPERRDELVEMLGIDLQWRMHQ--------LSDGQRRRVQLLIGLIRPFKVLLLD 186          
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A7S2RIN8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RIN8_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.750e-62
Identity = 105/171 (61.40%), Postives = 130/171 (76.02%), Query Frame = 0
Query:   18 AVVVTKLDFTYDGMD-KPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 187
            ++ V  L FTYD    K +LK  +L+L TGSRCLLIG NG+GKSTLLR+LAGRH++ PD  V VL  +AFRDT LN HR++L  DWGMRT++FAG GVPL ADI V  MM++ Q+ YPERR+EL+ LLG+D  WRMHQ        +SDGQRRRVQLL+GL++PFK+LLLD
Sbjct:   53 SIEVNDLTFTYDSRKGKRILKNLNLNLETGSRCLLIGANGSGKSTLLRILAGRHLSSPDGNVKVLGLNAFRDTKLNFHRAYLDCDWGMRTVAFAGCGVPLMADIPVYKMMERLQQTYPERRDELVELLGIDLRWRMHQ--------LSDGQRRRVQLLIGLIRPFKVLLLD 215          
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: B8C780_THAPS (ABC transporter domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C780_THAPS)

HSP 1 Score: 202 bits (514), Expect = 3.530e-61
Identity = 101/177 (57.06%), Postives = 129/177 (72.88%), Query Frame = 0
Query:   12 PEIAGSAVVVTKLDFTYDGMD-KPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 187
            P  A  A+ +T L F+YD    KP L+  +L LP GSRCLLIG NG+GKSTLLRL++GRH+ KP+  + VL  ++FRDT LN HR++L   WG++T++FAG GVPL ADI V  MM+K Q  YPERR+EL+ +LG+DPNWRMH         +SDGQRRRVQLL+ LV+PF +LLLD
Sbjct:   20 PYDANKAISITDLTFSYDPSTLKPTLENLNLQLPQGSRCLLIGANGSGKSTLLRLISGRHLAKPEGCITVLGLNSFRDTRLNFHRAYLETGWGLQTVAFAGCGVPLMADIPVFKMMEKLQNAYPERRDELIEMLGIDPNWRMHM--------LSDGQRRRVQLLIQLVRPFTILLLD 188          
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Match: A0A812WKF7_SYMMI (ABCI20 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WKF7_SYMMI)

HSP 1 Score: 194 bits (493), Expect = 7.310e-60
Identity = 97/167 (58.08%), Postives = 124/167 (74.25%), Query Frame = 0
Query:   21 VTKLDFTYDGMDKPVLKKFDLDLPTGSRCLLIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSMDWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNWRMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD 187
            +T L+F Y    K VLK  ++ L  G+RCLLIG NGAGKST+LR+LAG+H+ KP ++V+VL +  F D +LN  R++L  DWGMRT++FAG+G PLQADI V  MMKK Q  YPERREEL+ +LG+D NWRMH         VSDGQRRRVQ+ +GL++PFK+LLLD
Sbjct:   14 ITGLNFAYPDQ-KLVLKDLNMHLTRGARCLLIGANGAGKSTMLRILAGKHLIKPPESVLVLGRETFYDRSLNFERAYLDTDWGMRTVAFAGYGCPLQADIPVHAMMKKLQSDYPERREELIKMLGIDINWRMHM--------VSDGQRRRVQIFIGLLRPFKILLLD 171          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6639.17497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L275_9PHAE5.060e-11989.85ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835ZJB2_9STRA2.300e-7467.61P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4D9D643_9STRA1.800e-6661.93ABC transporter domain-containing protein n=2 Tax=... [more]
D8LIU8_ECTSI6.960e-6590.91ABC transporter domain-containing protein n=1 Tax=... [more]
A0A7S3M0C2_9STRA7.660e-6558.79Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7R9ZBK7_9STRA8.160e-6461.24Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3PTX2_9STRA2.650e-6258.10Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2RIN8_9STRA2.750e-6261.40Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
B8C780_THAPS3.530e-6157.06ABC transporter domain-containing protein n=1 Tax=... [more]
A0A812WKF7_SYMMI7.310e-6058.08ABCI20 protein n=1 Tax=Symbiodinium microadriaticu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 11..187
e-value: 9.8E-23
score: 82.9
NoneNo IPR availablePANTHERPTHR12847ATP-BINDING CASSETTE ABC TRANSPORTER-RELATEDcoord: 16..187
NoneNo IPR availablePANTHERPTHR12847:SF5CCR4-ASSOCIATED FACTOR 16coord: 16..187
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 36..187
e-value: 3.4E-15
score: 56.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6639contigEcto-sp13_S_contig6639:5525..8090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6639.17497.1mRNA_Ecto-sp13_S_contig6639.17497.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6639 5525..8090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6639.17497.1 ID=prot_Ecto-sp13_S_contig6639.17497.1|Name=mRNA_Ecto-sp13_S_contig6639.17497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
MLVFLGASGSTPEIAGSAVVVTKLDFTYDGMDKPVLKKFDLDLPTGSRCL
LIGQNGAGKSTLLRLLAGRHITKPDDAVIVLDKHAFRDTTLNKHRSFLSM
DWGMRTISFAGHGVPLQADIAVGDMMKKDQERYPERREELLNLLGVDPNW
RMHQASKTHEACVSDGQRRRVQLLLGLVKPFKLLLLD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase