prot_Ecto-sp13_S_contig66251.17483.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig66251.17483.1
Unique Nameprot_Ecto-sp13_S_contig66251.17483.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length56
Homology
BLAST of mRNA_Ecto-sp13_S_contig66251.17483.1 vs. uniprot
Match: D8LDN6_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN6_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 2.940e-12
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 YSSVERWSRGEDLFTKKFVFTPLAKDMHWSLACFCNLDKIQV 42
            YS V+ W+R  DLF KKFV  P+ +DMHWSLAC CNLDK++V
Sbjct:  424 YSKVQHWTRNVDLFKKKFVLVPVVEDMHWSLACLCNLDKLEV 465          
BLAST of mRNA_Ecto-sp13_S_contig66251.17483.1 vs. uniprot
Match: A0A6H5KTD8_9PHAE (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD8_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 7.520e-12
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 YSSVERWSRGEDLFTKKFVFTPLAKDMHWSLACFCNLDKIQV 42
            YS V+ W+R  DLF KKFV  P+ +D+HWSLAC CNLDK++V
Sbjct:  726 YSKVQHWTRSVDLFKKKFVLVPVVEDLHWSLACLCNLDKLEV 767          
BLAST of mRNA_Ecto-sp13_S_contig66251.17483.1 vs. uniprot
Match: A0A7S3ZZX5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZX5_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.140e-7
Identity = 21/46 (45.65%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 YSSVERWSRGEDLFTKKFVFTPLAKDMHWSLACFCNLDKIQVRYVS 46
            ++ VERW+RG D+F KKF+  P+ +D+HWSLA  C+  ++  R V+
Sbjct:  131 HARVERWTRGVDVFAKKFLLVPVVEDLHWSLAIVCHPGELAKRAVA 176          
BLAST of mRNA_Ecto-sp13_S_contig66251.17483.1 vs. uniprot
Match: A0A7S4A0P2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0P2_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.180e-7
Identity = 21/46 (45.65%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 YSSVERWSRGEDLFTKKFVFTPLAKDMHWSLACFCNLDKIQVRYVS 46
            ++ VERW+RG D+F KKF+  P+ +D+HWSLA  C+  ++  R V+
Sbjct:  163 HARVERWTRGVDVFAKKFLLVPVVEDLHWSLAIVCHPGELAKRAVA 208          
BLAST of mRNA_Ecto-sp13_S_contig66251.17483.1 vs. uniprot
Match: A0A8J2SX84_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SX84_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.220e-7
Identity = 21/46 (45.65%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 YSSVERWSRGEDLFTKKFVFTPLAKDMHWSLACFCNLDKIQVRYVS 46
            ++ VERW+RG D+F KKF+  P+ +D+HWSLA  C+  ++  R V+
Sbjct:  322 HARVERWTRGVDVFAKKFLLVPVVEDLHWSLAIVCHPGELAKRAVA 367          
BLAST of mRNA_Ecto-sp13_S_contig66251.17483.1 vs. uniprot
Match: A0A7S4A074_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A074_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.080e-6
Identity = 20/43 (46.51%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    4 VERWSRGEDLFTKKFVFTPLAKDMHWSLACFCNLDKIQVRYVS 46
            VERW+RG D+F KKF+  P+ +D+HWSLA  C+  ++  R ++
Sbjct:  319 VERWTRGVDVFAKKFLLVPVVEDLHWSLAIVCHPGELAKRAIA 361          
BLAST of mRNA_Ecto-sp13_S_contig66251.17483.1 vs. uniprot
Match: F0YQ64_AURAN (ULP_PROTEASE domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQ64_AURAN)

HSP 1 Score: 51.6 bits (122), Expect = 3.780e-6
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    1 YSSVERWSRGEDLFTKKFVFTPLAKDMHWSLACFCN 36
            Y  VERW+RG D+F+KKF+  P+ + +HWSLA  C+
Sbjct:  332 YDRVERWTRGVDVFSKKFLVVPIVEHLHWSLAIVCH 367          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig66251.17483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LDN6_ECTSI2.940e-1264.29ULP_PROTEASE domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KTD8_9PHAE7.520e-1261.90ULP_PROTEASE domain-containing protein n=1 Tax=Ect... [more]
A0A7S3ZZX5_9STRA4.140e-745.65Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4A0P2_9STRA4.180e-745.65Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2SX84_9STRA4.220e-745.65Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4A074_9STRA1.080e-646.51Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YQ64_AURAN3.780e-652.78ULP_PROTEASE domain-containing protein n=2 Tax=Aur... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.310.130coord: 1..56
e-value: 1.1E-10
score: 43.6
IPR003653Ulp1 protease family, C-terminal catalytic domainPFAMPF02902Peptidase_C48coord: 2..39
e-value: 2.9E-6
score: 27.3
IPR003653Ulp1 protease family, C-terminal catalytic domainPROSITEPS50600ULP_PROTEASEcoord: 1..56
score: 10.184
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig66251contigEcto-sp13_S_contig66251:164..331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig66251.17483.1mRNA_Ecto-sp13_S_contig66251.17483.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig66251 164..331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig66251.17483.1 ID=prot_Ecto-sp13_S_contig66251.17483.1|Name=mRNA_Ecto-sp13_S_contig66251.17483.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp
YSSVERWSRGEDLFTKKFVFTPLAKDMHWSLACFCNLDKIQVRYVSTAVC
NLFMPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003653Peptidase_C48_C
IPR038765Papain-like_cys_pep_sf