prot_Ecto-sp13_S_contig662.17476.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig662.17476.1
Unique Nameprot_Ecto-sp13_S_contig662.17476.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length356
Homology
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BLAST of mRNA_Ecto-sp13_S_contig662.17476.1 vs. uniprot
Match: D7FIN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIN9_ECTSI)

HSP 1 Score: 469 bits (1207), Expect = 1.690e-164
Identity = 263/275 (95.64%), Postives = 267/275 (97.09%), Query Frame = 0 
Query:   81 RPRQSAWTVRGGYKHGSSAIASSSGSNSGNSVGQDGFAPSGETTAADSNIDKLAADLRATRDHXXXXXXXXXXXXXXXXXXXXXKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVANRRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITASSTTNGEGGTPNTAGLATLKDIVAGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDRVVLRGVRVTAWEHGAAAVWALTRLMTGPGGKLTHLVACAWLAGMAFLCAYFGRQL 355
            RPRQSAWTVRGGYKHGSSA AS+SGSNS NSVGQDGF P GETTA DSNIDKLAADLRATRDHXXXXXXXXXXXXXXXXXXXXXKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVANRRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITA+ST NGEGGTPNTA L TL+DIVAGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDRVVLRGVRVTAWEHGAAAVWALTRL+TGPGGKLTHLVACAWLAGMAFLCAYFGRQL
Sbjct:    2 RPRQSAWTVRGGYKHGSSATASNSGSNSSNSVGQDGFPPRGETTAVDSNIDKLAADLRATRDHXXXXXXXXXXXXXXXXXXXXXKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVANRRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITAASTMNGEGGTPNTAVLDTLRDIVAGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDRVVLRGVRVTAWEHGAAAVWALTRLLTGPGGKLTHLVACAWLAGMAFLCAYFGRQL 276
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig662.17476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIN9_ECTSI1.690e-16495.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 275..296
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 332..352
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 297..307
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..326
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 230..274
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 353..355
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 327..331
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..210
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 211..230
NoneNo IPR availableTMHMMTMhelixcoord: 332..354
NoneNo IPR availableTMHMMTMhelixcoord: 275..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig662contigEcto-sp13_S_contig662:13644..16661 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig662.17476.1mRNA_Ecto-sp13_S_contig662.17476.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig662 11771..17008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig662.17476.1 ID=prot_Ecto-sp13_S_contig662.17476.1|Name=mRNA_Ecto-sp13_S_contig662.17476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=356bp
MHHPTAHQLTTLCDLATHTMPSRYGNAPAKRLRFAGATLACLTLISTGVS
VIHETYSHQHRSLQRRSRTLRSGAQAWSRTRPRQSAWTVRGGYKHGSSAI
ASSSGSNSGNSVGQDGFAPSGETTAADSNIDKLAADLRATRDHIAADIHA
RGEAIAADLKGKQEKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVAN
RRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITASSTTNGEGG
TPNTAGLATLKDIVAGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDR
VVLRGVRVTAWEHGAAAVWALTRLMTGPGGKLTHLVACAWLAGMAFLCAY
FGRQL*
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