mRNA_Ecto-sp13_S_contig662.17475.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig662.17475.1 vs. uniprot
Match: D7FIN8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN8_ECTSI) HSP 1 Score: 114 bits (286), Expect = 3.640e-27 Identity = 95/122 (77.87%), Postives = 97/122 (79.51%), Query Frame = 1
Query: 4 NTL-LEGGADKHTLSGDGQAPLHAAATRGSVAVTQALLASGAQVNLPRDKDGSSALSIAALNVHADVVELLIRRGADLGATDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDREFRTPL 366
NTL LEGGAD H AAATRGSVA TQ LLA+GA VNLPRDKDGSSALSIAALN HADVVELLIRRGADLGAT G XXXXXXXXXXXXXXXXXXXXXXX LDR+FRTPL
Sbjct: 307 NTLFLEGGADMHXXXXXXXXXXXAAATRGSVAATQVLLAAGAHVNLPRDKDGSSALSIAALNRHADVVELLIRRGADLGATGYGGXXXXXXXXXXXXXXXXXXXXXXXVSIEALDRDFRTPL 428
BLAST of mRNA_Ecto-sp13_S_contig662.17475.1 vs. uniprot
Match: A0A6H5KQT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQT5_9PHAE) HSP 1 Score: 113 bits (282), Expect = 5.990e-27 Identity = 61/83 (73.49%), Postives = 71/83 (85.54%), Query Frame = 1
Query: 1 INTLLEGGADKHTLSGDGQAPLHAAATRGSVAVTQALLASGAQVNLPRDKDGSSALSIAALNVHADVVELLIRRGADLGATDN 249
INTLLEGGA++++LSGDG+APLH AA GSVA TQALLA+GA V+LP DKDGSS LSIAALN HADV ++LIR A LGATD+
Sbjct: 21 INTLLEGGANENSLSGDGEAPLHVAAACGSVAATQALLAAGASVDLPFDKDGSSPLSIAALNGHADVAKVLIRHEAGLGATDS 103
BLAST of mRNA_Ecto-sp13_S_contig662.17475.1 vs. uniprot
Match: A0A7S0TFE4_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TFE4_HEMAN) HSP 1 Score: 58.5 bits (140), Expect = 1.800e-8 Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 61 PLHAAATRGSVAVTQALLASGAQVNLPRDKDGSSALSIAALNVHADVVELLIRRGADLGATD 246
PLH AA+RG+V + LL A +NL DG +AL A HADVV LL+ RGAD GATD
Sbjct: 46 PLHVAASRGAVNACRTLLDHKASINLAEGSDGYTALHYACGEGHADVVRLLLDRGADAGATD 107
BLAST of mRNA_Ecto-sp13_S_contig662.17475.1 vs. uniprot
Match: D8LEE7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEE7_ECTSI) HSP 1 Score: 58.5 bits (140), Expect = 1.760e-7 Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 130 VNLPRDKDGSSALSIAALNVHADVVELLIRRGADLGATD 246
V+LP DKDGSS LSIAALN HADV E+L R GA LGATD
Sbjct: 350 VDLPADKDGSSPLSIAALNGHADVTEVLNRHGAGLGATD 388
BLAST of mRNA_Ecto-sp13_S_contig662.17475.1 vs. uniprot
Match: A0A6H5KTD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD7_9PHAE) HSP 1 Score: 55.1 bits (131), Expect = 1.590e-6 Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 1
Query: 1 INTLLEGGADKHTLSGDGQAPLHAAATRGSVAVTQALLASGAQVNLPRDKDGSSALSIAALNVHADVVELLIRRGADLGATD 246
+ TLL GAD + +G+ PL+ A G VAV +ALLA+GA V+ + + L AA HA+V+ LL+ RGA A D
Sbjct: 67 VRTLLIEGADPDSFDSNGRTPLYLACLLGKVAVARALLAAGAHVSRVVKEPKDAPLDAAATEGHAEVMRLLVERGAVEPAVD 148
BLAST of mRNA_Ecto-sp13_S_contig662.17475.1 vs. uniprot
Match: A0A194SBG8_RHOGW (ACB domain-containing protein n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A194SBG8_RHOGW) HSP 1 Score: 53.5 bits (127), Expect = 5.340e-6 Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 22 GADKHTLSGDGQAPLHAAATRGSVAVTQALLASGAQVNLPRDKDGSSALSIAALNVHADVVELL 213
G D + G APLH A RG V +ALLA GA +LP D+DG++AL +A L HAD+VELL
Sbjct: 157 GVDLNERDSYGYAPLHLATDRGHADVVKALLAHGADRSLP-DEDGNTALDLARLAEHADLVELL 219
BLAST of mRNA_Ecto-sp13_S_contig662.17475.1 vs. uniprot
Match: A0A5C3NBI2_9AGAM (Asparaginase n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3NBI2_9AGAM) HSP 1 Score: 53.9 bits (128), Expect = 7.160e-6 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 46 GDGQAPLHAAATRGSVAVTQALLASGAQVNLPRDKDGSSALSIAALNVHADVVELLIRRGADLGATD 246
G G++PLH AA GS+ LL +GA V+L RD G +AL AA H D+V++L++ GA+LG +D
Sbjct: 578 GSGRSPLHTAAVNGSMECVGKLLEAGALVHL-RDALGHTALYYAARQGHEDIVDILVKAGANLGGSD 643
BLAST of mRNA_Ecto-sp13_S_contig662.17475.1 vs. uniprot
Match: A0A428PG23_9HYPO (HET domain-containing protein n=1 Tax=Fusarium sp. AF-6 TaxID=1325737 RepID=A0A428PG23_9HYPO) HSP 1 Score: 52.0 bits (123), Expect = 3.600e-5 Identity = 34/79 (43.04%), Postives = 44/79 (55.70%), Query Frame = 1
Query: 10 LLEGGADKHTLSGDGQAPLHAAATRGSVAVTQALLASGAQVNLPRDKDGSSALSIAALNVHADVVELLIRRGADLGATD 246
LLE GAD L GQ+PLH AA G V V L+ L + +G +AL +A L H D+V+LL+R DL +TD
Sbjct: 380 LLEAGADPDALDWRGQSPLHLAAQHGYVEVASLLMKRSDASIL--NSEGFTALHLALLESHNDMVKLLVRENDDLHSTD 456
BLAST of mRNA_Ecto-sp13_S_contig662.17475.1 vs. uniprot
Match: A0A0C3PHF4_PISTI (Asparaginase n=1 Tax=Pisolithus tinctorius Marx 270 TaxID=870435 RepID=A0A0C3PHF4_PISTI) HSP 1 Score: 51.2 bits (121), Expect = 6.250e-5 Identity = 33/79 (41.77%), Postives = 46/79 (58.23%), Query Frame = 1
Query: 10 LLEGGADKHTLSGDGQAPLHAAATRGSVAVTQALLASGAQVNLPRDKDGSSALSIAALNVHADVVELLIRRGADLGATD 246
++ GG G ++PLH AA GS A LL +GA V+L RD G +AL AA +AD+V+LL+ GA+LG +
Sbjct: 548 VIPGGTINCLEPGSNRSPLHVAALNGSTASVGCLLKAGALVHL-RDNLGHTALYYAARQGYADIVDLLVSAGANLGGLE 625 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig662.17475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig662.17475.1 >prot_Ecto-sp13_S_contig662.17475.1 ID=prot_Ecto-sp13_S_contig662.17475.1|Name=mRNA_Ecto-sp13_S_contig662.17475.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp INTLLEGGADKHTLSGDGQAPLHAAATRGSVAVTQALLASGAQVNLPRDKback to top mRNA from alignment at Ecto-sp13_S_contig662:10178..10549- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig662.17475.1 ID=mRNA_Ecto-sp13_S_contig662.17475.1|Name=mRNA_Ecto-sp13_S_contig662.17475.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=372bp|location=Sequence derived from alignment at Ecto-sp13_S_contig662:10178..10549- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig662:10178..10549- >mRNA_Ecto-sp13_S_contig662.17475.1 ID=mRNA_Ecto-sp13_S_contig662.17475.1|Name=mRNA_Ecto-sp13_S_contig662.17475.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=372bp|location=Sequence derived from alignment at Ecto-sp13_S_contig662:10178..10549- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |