prot_Ecto-sp13_S_contig6618.17473.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6618.17473.1
Unique Nameprot_Ecto-sp13_S_contig6618.17473.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Match: D7FUB1_ECTSI (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB1_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 4.620e-23
Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 WLFTTKQ-ERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEVR 51
            W  T KQ ERWSNPLMGWTST DPMSNM LSFSTPEQA+KFC+KRGWKYEV+
Sbjct:  122 WNLTFKQKERWSNPLMGWTSTGDPMSNMQLSFSTPEQAVKFCQKRGWKYEVK 173          
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Match: A0A4Y2J3H8_ARAVE (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2J3H8_ARAVE)

HSP 1 Score: 77.8 bits (190), Expect = 1.520e-16
Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    7 QERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEV 50
            +ERW NPLMGW+ST DP+SNM++ FSTPE+AI+FCEK GW Y V
Sbjct:  114 RERWENPLMGWSSTGDPLSNMNVQFSTPEEAIQFCEKNGWPYYV 157          
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Match: A0A401P3H8_SCYTO (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401P3H8_SCYTO)

HSP 1 Score: 74.7 bits (182), Expect = 4.970e-16
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    7 QERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEVRKK 53
            +ERW NPLMGW STADP+SNM LSF+T E A+ F EK GW YE+ +K
Sbjct:   45 RERWENPLMGWASTADPLSNMELSFTTKEDALAFVEKNGWSYEIEEK 91          
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Match: UPI0018F6BEC2 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F6BEC2)

HSP 1 Score: 75.9 bits (185), Expect = 6.080e-16
Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    7 QERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEVRKK 53
            +ERW NPLMGW STADP+SNM LSFST E AI F EK GW YE+ +K
Sbjct:   98 RERWENPLMGWASTADPLSNMELSFSTKEDAIAFVEKNGWSYELEEK 144          
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Match: A0A7L3ZZG8_9AVES (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L3ZZG8_9AVES)

HSP 1 Score: 75.1 bits (183), Expect = 6.780e-16
Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    7 QERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEVRKK 53
            +ERW NPLMGW STADP+SNM LSFST E AI F EK GW Y+V +K
Sbjct:   72 RERWENPLMGWASTADPLSNMVLSFSTKEDAIAFAEKNGWSYDVEEK 118          
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Match: A0A8J7T9C1_ATRSP (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7T9C1_ATRSP)

HSP 1 Score: 73.6 bits (179), Expect = 7.080e-16
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    7 QERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEVRKK 53
            +ERW NPLMGW STADP+SNM LSFS+ E AI F EK GW Y++++K
Sbjct:   18 RERWENPLMGWASTADPLSNMVLSFSSKEDAIAFAEKNGWSYDIQEK 64          
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Match: A0A8B6BM85_MYTGA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BM85_MYTGA)

HSP 1 Score: 74.7 bits (182), Expect = 7.750e-16
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    7 QERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEV 50
            QERW NPLMGWTST DP+SN++ +F TPE AI F EK GWKY V
Sbjct:   63 QERWENPLMGWTSTGDPLSNLNCTFLTPEDAIAFVEKNGWKYHV 106          
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Match: A0A091M1W0_CARIC (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) n=2 Tax=Cariama cristata TaxID=54380 RepID=A0A091M1W0_CARIC)

HSP 1 Score: 73.9 bits (180), Expect = 9.990e-16
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    7 QERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEVRKK 53
            +ERW NPLMGW STADP+SNM L+FST E AI F EK GW Y+V +K
Sbjct:   45 RERWENPLMGWASTADPLSNMVLTFSTKEDAIAFAEKNGWSYDVEEK 91          
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Match: A0A091KQF4_9GRUI (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) n=2 Tax=Chlamydotis macqueenii TaxID=187382 RepID=A0A091KQF4_9GRUI)

HSP 1 Score: 73.9 bits (180), Expect = 9.990e-16
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    7 QERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEVRKK 53
            +ERW NPLMGW STADP+SNM L+FST E AI F EK GW Y+V +K
Sbjct:   45 RERWENPLMGWASTADPLSNMVLTFSTKEDAIAFAEKNGWSYDVEEK 91          
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Match: A0A094KI88_ANTCR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) n=3 Tax=Caprimulgidae TaxID=48283 RepID=A0A094KI88_ANTCR)

HSP 1 Score: 73.9 bits (180), Expect = 9.990e-16
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    7 QERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEVRKK 53
            +ERW NPLMGW STADP+SNM L+FST E AI F EK GW Y+V +K
Sbjct:   45 RERWENPLMGWASTADPLSNMVLTFSTKEDAIAFAEKNGWSYDVEEK 91          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6618.17473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUB1_ECTSI4.620e-2382.69NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A4Y2J3H8_ARAVE1.520e-1670.45NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A401P3H8_SCYTO4.970e-1665.96NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
UPI0018F6BEC26.080e-1670.21NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7L3ZZG8_9AVES6.780e-1670.21NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A8J7T9C1_ATRSP7.080e-1665.96NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A8B6BM85_MYTGA7.750e-1670.45NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A091M1W0_CARIC9.990e-1668.09NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A091KQF4_9GRUI9.990e-1668.09NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A094KI88_ANTCR9.990e-1668.09NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPFAMPF04800ETC_C1_NDUFA4coord: 3..52
e-value: 8.3E-21
score: 74.1
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPANTHERPTHR12219NADH-UBIQUINONE OXIDOREDUCTASEcoord: 3..53
IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyGENE3D3.30.160.190coord: 1..53
e-value: 5.0E-22
score: 79.3
NoneNo IPR availablePANTHERPTHR12219:SF8NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIALcoord: 3..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6618contigEcto-sp13_S_contig6618:5706..5864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6618.17473.1mRNA_Ecto-sp13_S_contig6618.17473.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6618 5706..5864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6618.17473.1 ID=prot_Ecto-sp13_S_contig6618.17473.1|Name=mRNA_Ecto-sp13_S_contig6618.17473.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
WLFTTKQERWSNPLMGWTSTADPMSNMHLSFSTPEQAIKFCEKRGWKYEV
RKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006885NADH_UbQ_FeS_4_mit
IPR038532NDUFS4-like_sf