prot_Ecto-sp13_S_contig65800.17413.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65800.17413.1
Unique Nameprot_Ecto-sp13_S_contig65800.17413.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Match: UPI00142E2E82 (methyl-accepting chemotaxis protein n=1 Tax=Thalassospira lucentensis TaxID=168935 RepID=UPI00142E2E82)

HSP 1 Score: 201 bits (512), Expect = 5.310e-59
Identity = 118/125 (94.40%), Postives = 121/125 (96.80%), Query Frame = 0
Query:    1 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 125
            MMSEVG AV+QLHSVSE LRRSATTADEQSTTVSAGTEEASSNV+LVATAATELSASIHEIAG+VSDTSQMAISAS RAQTTNEDIQGLN AAVRIGEVIGMINDIAGQTNLLALNATIEAARAG
Sbjct:  401 MMSEVGAAVKQLHSVSEALRRSATTADEQSTTVSAGTEEASSNVELVATAATELSASIHEIAGRVSDTSQMAISASARAQTTNEDIQGLNAAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 525          
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Match: UPI0009DD60D4 (methyl-accepting chemotaxis protein n=1 Tax=Thalassospira australica TaxID=1528106 RepID=UPI0009DD60D4)

HSP 1 Score: 186 bits (473), Expect = 2.340e-53
Identity = 108/125 (86.40%), Postives = 118/125 (94.40%), Query Frame = 0
Query:    1 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 125
            MMSEVGTAV+QLHSVSEVLR SA  A+EQSTTVSAG+EEASS+VQ+VATAATELSASIHEIAGQ+SDTS+MA +ASE AQ TN+DIQGLN AAVRIGEVIG+INDIAGQTNLLALNATIEAARAG
Sbjct:  401 MMSEVGTAVQQLHSVSEVLRGSAAAANEQSTTVSAGSEEASSSVQIVATAATELSASIHEIAGQISDTSKMAAAASENAQNTNQDIQGLNAAAVRIGEVIGLINDIAGQTNLLALNATIEAARAG 525          
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Match: UPI0014321FA5 (methyl-accepting chemotaxis protein n=1 Tax=Thalassospira sp. HF15 TaxID=2722755 RepID=UPI0014321FA5)

HSP 1 Score: 159 bits (401), Expect = 4.330e-43
Identity = 98/125 (78.40%), Postives = 104/125 (83.20%), Query Frame = 0
Query:    1 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 125
            MMSEVGTAV+QLHSVSEVLR SA TA+EQSTTVSAG+EEASSNVQLVATAATELSASIHEIAGQ+SDTS                IQGLN AAVRIGEVI +I+DIA QTNLLALNATIEAARAG
Sbjct:  401 MMSEVGTAVQQLHSVSEVLRNSAVTANEQSTTVSAGSEEASSNVQLVATAATELSASIHEIAGQISDTSXXXXXXXXXXXXXXXXIQGLNAAAVRIGEVINLISDIAEQTNLLALNATIEAARAG 525          
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Match: A0A1X4NEG5_9PROT (Uncharacterized protein n=1 Tax=Thalassospira sp. MCCC 1A01428 TaxID=1470575 RepID=A0A1X4NEG5_9PROT)

HSP 1 Score: 154 bits (389), Expect = 1.950e-41
Identity = 92/125 (73.60%), Postives = 109/125 (87.20%), Query Frame = 0
Query:    1 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 125
            +M+ V  AVE+LH  S VLR SA  A +QS  VSAGTEEAS+NVQLVATAATELSASI+EI+ QVSDTS MA++ASERA+ T+++IQGL+ AA+RIGEVIG+I+DIAGQTNLLALNATIEAARAG
Sbjct:  391 VMASVDQAVERLHQSSGVLRESADIASKQSVAVSAGTEEASANVQLVATAATELSASINEISSQVSDTSNMALAASERARITSDNIQGLDNAAIRIGEVIGLISDIAGQTNLLALNATIEAARAG 515          
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Match: A0A0B4Y202_9PROT (Methyl-accepting chemotaxis protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 TaxID=1123366 RepID=A0A0B4Y202_9PROT)

HSP 1 Score: 132 bits (333), Expect = 7.440e-37
Identity = 84/125 (67.20%), Postives = 98/125 (78.40%), Query Frame = 0
Query:    1 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 125
            +M+EVG AV+QLH VS VLR+SA TA  QS  VS+GTEEAS+NVQLVATAATEL+ASI+EI+GQVS+TS MA S                 AA++IGEVIG+I+DIAGQTNLLALNATIEAARAG
Sbjct:   42 VMAEVGGAVDQLHQVSNVLRKSADTAANQSLAVSSGTEEASANVQLVATAATELAASINEISGQVSETSXMAQSXXXXXXXXXXXXXXXXDAALKIGEVIGLISDIAGQTNLLALNATIEAARAG 166          
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Match: A0A1B9VBS2_9PROT (Methyl-accepting chemotaxis sensory transducer n=3 Tax=unclassified Thalassospira TaxID=2648997 RepID=A0A1B9VBS2_9PROT)

HSP 1 Score: 134 bits (338), Expect = 2.590e-34
Identity = 85/125 (68.00%), Postives = 99/125 (79.20%), Query Frame = 0
Query:    1 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 125
            +M+EVG AV+QLH VS VLR+SA TA  QS  VS+GTEEAS+NVQLVATAATEL+ASI+EI+GQVS+TS MA SA                AA++IGEVIG+I+DIAGQTNLLALNATIEAARAG
Sbjct:  391 VMAEVGGAVDQLHQVSNVLRKSADTAANQSLAVSSGTEEASANVQLVATAATELAASINEISGQVSETSXMAQSAXXXXXXXXXXXXXXXDAALKIGEVIGLISDIAGQTNLLALNATIEAARAG 515          
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Match: A0A367WPR7_9PROT (Uncharacterized protein n=2 Tax=Thalassospira profundimaris TaxID=502049 RepID=A0A367WPR7_9PROT)

HSP 1 Score: 124 bits (310), Expect = 1.870e-30
Identity = 79/125 (63.20%), Postives = 94/125 (75.20%), Query Frame = 0
Query:    1 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 125
            +M++V  AV+QLH VS VLR SA TA +QS  VS+G EEASSNVQLVATAATEL+ASI+  +GQVS+TS MA SA                +A++IGEVIG+I+DIA QTNLLALNATIEAARAG
Sbjct:  394 VMADVAVAVKQLHQVSNVLRNSAETAADQSMAVSSGAEEASSNVQLVATAATELAASINXXSGQVSETSTMAQSAXXXXXXXXXXXXXXXXSAIKIGEVIGLISDIAAQTNLLALNATIEAARAG 518          
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Match: A0A367V482_9PROT (Uncharacterized protein n=6 Tax=Thalassospira TaxID=168934 RepID=A0A367V482_9PROT)

HSP 1 Score: 122 bits (307), Expect = 4.880e-30
Identity = 84/125 (67.20%), Postives = 84/125 (67.20%), Query Frame = 0
Query:    1 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 125
            MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATA                                         AAVRIGEVIGMINDIAGQTNLLALNATIEAARAG
Sbjct:  401 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 525          
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Match: A0A367VKF4_9PROT (Uncharacterized protein n=6 Tax=Thalassospira TaxID=168934 RepID=A0A367VKF4_9PROT)

HSP 1 Score: 119 bits (297), Expect = 1.110e-28
Identity = 78/125 (62.40%), Postives = 89/125 (71.20%), Query Frame = 0
Query:    1 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 125
            +MS+VG+AVEQLH VS VLR SA TA +QS  VS+G EEASSNVQLVATAATELSA           TS MA+SA+ER              A++IGEVI +I+DIA QTNLLALNATIEAARAG
Sbjct:  390 VMSDVGSAVEQLHQVSNVLRDSAKTATDQSMAVSSGAEEASSNVQLVATAATELSAXXXXXXXXXXXTSNMAVSATERXXXXXXXXXXXXXXAIKIGEVISLISDIAEQTNLLALNATIEAARAG 514          
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Match: A0A367WAC3_9PROT (Uncharacterized protein n=1 Tax=Thalassospira profundimaris TaxID=502049 RepID=A0A367WAC3_9PROT)

HSP 1 Score: 115 bits (289), Expect = 1.360e-27
Identity = 75/125 (60.00%), Postives = 89/125 (71.20%), Query Frame = 0
Query:    1 MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATAATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVIGMINDIAGQTNLLALNATIEAARAG 125
            +M++V TAV+QLH VS +LR SA TA +QS  VS+G EEASSNVQLVATAATEL+ASI+E  G       MA                 N +A++IGEVIG+I+DIAGQTNLLALNATIEAARAG
Sbjct:  390 VMADVATAVKQLHQVSGILRASADTAADQSMAVSSGAEEASSNVQLVATAATELAASINEXXGXXXXXXSMAQXXXXXXXXXXXXXXXXNDSAIKIGEVIGLISDIAGQTNLLALNATIEAARAG 514          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65800.17413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00142E2E825.310e-5994.40methyl-accepting chemotaxis protein n=1 Tax=Thalas... [more]
UPI0009DD60D42.340e-5386.40methyl-accepting chemotaxis protein n=1 Tax=Thalas... [more]
UPI0014321FA54.330e-4378.40methyl-accepting chemotaxis protein n=1 Tax=Thalas... [more]
A0A1X4NEG5_9PROT1.950e-4173.60Uncharacterized protein n=1 Tax=Thalassospira sp. ... [more]
A0A0B4Y202_9PROT7.440e-3767.20Methyl-accepting chemotaxis protein n=1 Tax=Thalas... [more]
A0A1B9VBS2_9PROT2.590e-3468.00Methyl-accepting chemotaxis sensory transducer n=3... [more]
A0A367WPR7_9PROT1.870e-3063.20Uncharacterized protein n=2 Tax=Thalassospira prof... [more]
A0A367V482_9PROT4.880e-3067.20Uncharacterized protein n=6 Tax=Thalassospira TaxI... [more]
A0A367VKF4_9PROT1.110e-2862.40Uncharacterized protein n=6 Tax=Thalassospira TaxI... [more]
A0A367WAC3_9PROT1.360e-2760.00Uncharacterized protein n=1 Tax=Thalassospira prof... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004090Chemotaxis methyl-accepting receptorPRINTSPR00260CHEMTRNSDUCRcoord: 24..53
score: 26.19
coord: 102..125
score: 60.71
NoneNo IPR availableGENE3D1.10.287.950coord: 1..125
e-value: 5.3E-26
score: 93.6
NoneNo IPR availablePANTHERPTHR32089:SF92coord: 4..125
NoneNo IPR availablePANTHERPTHR32089FAMILY NOT NAMEDcoord: 4..125
NoneNo IPR availableSUPERFAMILY58104Methyl-accepting chemotaxis protein (MCP) signaling domaincoord: 7..125
IPR004089Methyl-accepting chemotaxis protein (MCP) signalling domainPFAMPF00015MCPsignalcoord: 68..125
e-value: 3.4E-12
score: 46.5
IPR004089Methyl-accepting chemotaxis protein (MCP) signalling domainPROSITEPS50111CHEMOTAXIS_TRANSDUC_2coord: 15..125
score: 18.451

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65800contigEcto-sp13_S_contig65800:377..751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65800.17413.1mRNA_Ecto-sp13_S_contig65800.17413.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65800 2..751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65800.17413.1 ID=prot_Ecto-sp13_S_contig65800.17413.1|Name=mRNA_Ecto-sp13_S_contig65800.17413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MMSEVGTAVEQLHSVSEVLRRSATTADEQSTTVSAGTEEASSNVQLVATA
ATELSASIHEIAGQVSDTSQMAISASERAQTTNEDIQGLNTAAVRIGEVI
GMINDIAGQTNLLALNATIEAARAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004090Chemotax_Me-accpt_rcpt
IPR004089MCPsignal_dom