prot_Ecto-sp13_S_contig658.17410.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig658.17410.1
Unique Nameprot_Ecto-sp13_S_contig658.17410.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length329
Homology
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BLAST of mRNA_Ecto-sp13_S_contig658.17410.1 vs. uniprot
Match: D7G4S8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S8_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 1.210e-58
Identity = 211/328 (64.33%), Postives = 218/328 (66.46%), Query Frame = 0 
Query:    1 MATPDVKFVMGKFAKSLGLPFDDCEVQGGRFWSVSTTEPXXXXXXXXXXXXXXXXXXXXXXXXRGDTRVEATAXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSIDRGFLGDPIGESKPSAGTLEEDGVDDIDDGNVDEDIATEARAFLEGGXXXXXXXXXXXRGGAKAYGVAPFSTSPRQPEGPEDDGDAYVDAEDADEVMAEAEAFLRGERGSPDSAPAIAGSTVESSSRQKKEQSPKKTVAGGDADGVSKDSAEPVLETFEVAGGLAIVNAPEGAEDDDDFEGDFVLDGGEFDEDDWGXXXXXXXXXXXXXXXXXXXXXXXEAAQG 328
            MATPDVKFVMGKFAKSLGLPFDDCEVQGGRFWSVSTTEP  XXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXX       SSSIDRGFLGDPI                                                                                  DADE+MAEAEAFLRGERGSPDSAPA+AG+TVE SSRQKK+QSP K+ AGGDAD VSK++A PVLETFEVAGGLAIVN PEGAEDDDDFEGDFVL GGEFDEDDWG  XXXXXXXXXXXXXXXXXXXXXEAAQG
Sbjct: 1191 MATPDVKFVMGKFAKSLGLPFDDCEVQGGRFWSVSTTEPPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRKRAA-SSSIDRGFLGDPI----------------------------------------------------------------------------------DADEIMAEAEAFLRGERGSPDSAPAVAGATVEPSSRQKKKQSPDKSAAGGDADSVSKEAAAPVLETFEVAGGLAIVNVPEGAEDDDDFEGDFVLGGGEFDEDDWGDGXXXXXXXXXXXXXXXXXXXXXEAAQG 1435
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig658.17410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4S8_ECTSI1.210e-5864.33DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig658contigEcto-sp13_S_contig658:3268..4254 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig658.17410.1mRNA_Ecto-sp13_S_contig658.17410.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig658 3009..4877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig658.17410.1 ID=prot_Ecto-sp13_S_contig658.17410.1|Name=mRNA_Ecto-sp13_S_contig658.17410.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=329bp
MATPDVKFVMGKFAKSLGLPFDDCEVQGGRFWSVSTTEPPAASAARAAVT
AAKEGAAVVAAGARGDTRVEATATVGGGVVVADDSAEPLPLPPPPRRRTA
SSSIDRGFLGDPIGESKPSAGTLEEDGVDDIDDGNVDEDIATEARAFLEG
GGAAAAAAAAAARGGAKAYGVAPFSTSPRQPEGPEDDGDAYVDAEDADEV
MAEAEAFLRGERGSPDSAPAIAGSTVESSSRQKKEQSPKKTVAGGDADGV
SKDSAEPVLETFEVAGGLAIVNAPEGAEDDDDFEGDFVLDGGEFDEDDWG
DGDWGDGERAVGEEEDDEQEDEEEAAQG*
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