prot_Ecto-sp13_S_contig64834.17268.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig64834.17268.1
Unique Nameprot_Ecto-sp13_S_contig64834.17268.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length48
Homology
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Match: A0A7S3M0Q2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M0Q2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.650e-14
Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    2 GAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLY 46
            GAV+ +RWS DG+A+ + GEDGD+KIWS+SGNLRSTL+ TG S+Y
Sbjct:   98 GAVILIRWSHDGAAILTAGEDGDIKIWSKSGNLRSTLVSTGQSVY 142          
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Match: K3WVM6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVM6_GLOUD)

HSP 1 Score: 70.5 bits (171), Expect = 5.910e-13
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    2 GAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLYAL 48
            GAV+ ++W+ DG+AL + GEDG +KIWSRSGNLRSTL  TG S+YA+
Sbjct:  101 GAVIVLKWNYDGTALVTAGEDGTIKIWSRSGNLRSTLASTGRSIYAV 147          
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Match: A0A2G8JQB2_STIJA (Putative intraflagellar transport protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JQB2_STIJA)

HSP 1 Score: 70.1 bits (170), Expect = 7.210e-13
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    2 GAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLYAL 48
            GAV+C RWS DGSA+ + GEDG VKIWSRSG LRST+ QTG  +Y++
Sbjct:  119 GAVLCGRWSYDGSAMATSGEDGQVKIWSRSGMLRSTIAQTGSPVYSI 165          
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Match: A0A507DTG5_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DTG5_9FUNG)

HSP 1 Score: 70.1 bits (170), Expect = 8.080e-13
Identity = 29/47 (61.70%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    2 GAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLYAL 48
            GAV+C+RW+ +GSAL + GEDG VKIWSRSG LRS ++QTG+ +Y++
Sbjct:  116 GAVLCLRWNNEGSALVTAGEDGHVKIWSRSGMLRSVIIQTGYPIYSI 162          
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Match: A0A2G8L758_STIJA (Putative intraflagellar transport protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L758_STIJA)

HSP 1 Score: 70.1 bits (170), Expect = 8.080e-13
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    2 GAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLYAL 48
            GAV+C RWS DGSA+ + GEDG VKIWSRSG LRST+ QTG  +Y++
Sbjct:   93 GAVLCGRWSYDGSAMATSGEDGQVKIWSRSGMLRSTIAQTGSPVYSI 139          
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Match: A0A7S1EYY4_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1EYY4_NOCSC)

HSP 1 Score: 70.1 bits (170), Expect = 8.080e-13
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    2 GAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLYAL 48
            GAV+ VRWS DGSA+ S GEDG VK+WSRSG LRSTL Q  H++Y++
Sbjct:   38 GAVISVRWSLDGSAIASAGEDGSVKVWSRSGMLRSTLTQMPHAVYSV 84          
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Match: A0A2D4BWK4_PYTIN (Intraflagellar Transport protein 80 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWK4_PYTIN)

HSP 1 Score: 69.3 bits (168), Expect = 1.510e-12
Identity = 29/47 (61.70%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    2 GAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLYAL 48
            GA++ ++W+ DG+AL + GEDG +KIWSRSGNLRSTL  TG S+YA+
Sbjct:  475 GAIIALKWNYDGTALVTAGEDGVIKIWSRSGNLRSTLASTGRSVYAV 521          
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Match: A0A2D4BW51_PYTIN (Intraflagellar Transport protein 80 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW51_PYTIN)

HSP 1 Score: 69.3 bits (168), Expect = 1.510e-12
Identity = 29/47 (61.70%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    2 GAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLYAL 48
            GA++ ++W+ DG+AL + GEDG +KIWSRSGNLRSTL  TG S+YA+
Sbjct:  102 GAIIALKWNYDGTALVTAGEDGVIKIWSRSGNLRSTLASTGRSVYAV 148          
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Match: A0A812RG83_SYMMI (IFT80 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RG83_SYMMI)

HSP 1 Score: 68.9 bits (167), Expect = 2.060e-12
Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    2 GAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLY 46
            GAV+ V WS DG+AL + GEDGDVKIWSRSGN+RS L  TG S+Y
Sbjct:   29 GAVIAVDWSHDGAALLTGGEDGDVKIWSRSGNMRSVLASTGQSVY 73          
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Match: F0WV09_9STRA (KIAA1374 protein putative n=3 Tax=Albugo TaxID=65356 RepID=F0WV09_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.060e-12
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    2 GAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLYA 47
            GAV+ ++W+ DG+AL + GEDG +KIWSRSGNLRSTL  TG S+YA
Sbjct:  101 GAVIALKWNYDGTALITAGEDGMLKIWSRSGNLRSTLASTGRSIYA 146          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig64834.17268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3M0Q2_9STRA6.650e-1466.67Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
K3WVM6_GLOUD5.910e-1363.83Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2G8JQB2_STIJA7.210e-1365.96Putative intraflagellar transport protein n=1 Tax=... [more]
A0A507DTG5_9FUNG8.080e-1361.70Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A2G8L758_STIJA8.080e-1365.96Putative intraflagellar transport protein n=1 Tax=... [more]
A0A7S1EYY4_NOCSC8.080e-1365.96Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A2D4BWK4_PYTIN1.510e-1261.70Intraflagellar Transport protein 80 n=1 Tax=Pythiu... [more]
A0A2D4BW51_PYTIN1.510e-1261.70Intraflagellar Transport protein 80 n=1 Tax=Pythiu... [more]
A0A812RG83_SYMMI2.060e-1268.89IFT80 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
F0WV09_9STRA2.060e-1265.22KIAA1374 protein putative n=3 Tax=Albugo TaxID=653... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 4..29
e-value: 1.8E-6
score: 28.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..29
score: 11.578
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..48
e-value: 1.3E-10
score: 42.4
NoneNo IPR availablePANTHERPTHR24098:SF0INTRAFLAGELLAR TRANSPORT 80 HOMOLOG (CHLAMYDOMONAS)coord: 2..47
NoneNo IPR availablePANTHERPTHR24098FAMILY NOT NAMEDcoord: 2..47
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..38
score: 10.417
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig64834contigEcto-sp13_S_contig64834:3..599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig64834.17268.1mRNA_Ecto-sp13_S_contig64834.17268.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig64834 3..605 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig64834.17268.1 ID=prot_Ecto-sp13_S_contig64834.17268.1|Name=mRNA_Ecto-sp13_S_contig64834.17268.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=48bp
MGAVVCVRWSPDGSALCSCGEDGDVKIWSRSGNLRSTLMQTGHSLYAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf