mRNA_Ecto-sp13_S_contig6463.17241.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI) HSP 1 Score: 624 bits (1610), Expect = 1.860e-216 Identity = 372/511 (72.80%), Postives = 411/511 (80.43%), Query Frame = 1
Query: 172 VRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDALEDIQRVIAASTARSVYPDDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSALRSGLCQAYLAASVIDSDWVSTSNTGRMGKAGAALQLMSSAVPVVDGLAGLAGKALETGDHYLQTRRLVKITTTAPDAVECCSLARRLALQLTDSLRHDTSTTADDVGEVCASTTAGMNGGSRYGRSAHMMPGDMSEEDVFEHLLEEVSSYKRNDHGGNRLGKMHLRKLLKAIQRGCLDGSRCTEHKIEVLLLEILPEADDRPVATSSTPKEV-IRSPPVLAPAHDSGLPSMGDFAAMRAELQVLKSDKEKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKHVPELDSDPNEEVDFAGGLALRRRVAVTETAKGFFDRARDRAARAGDHHPVTVAEQREFEALQNEKHRGLEARLRELEGAISKATKPKG 1701
VRSPEH LSP KA ++D M AQ SSSAGL LI +NP+ALEDIQRVI A+T RS++PDDELSD+ RR LGTLVTMSTALGEVAL+HTEDM V+RKELALPPFSKEYYSA+RSGLCQAYLAASVIDS+WVSTS TG MGK GAAL+LMS AVP++ GL LAGKALE GD YLQTRRLVKIT APD VECCSLARRLALQLTD LR++ S T DD +V +TTAG GS GR A MMPGDMSEEDVF++LLEEV++Y+RNDHGG RLGK HLRKLLKAIQ GCLDGS T KI++LLLEILPEADD+P AT TPKEV +RSPP A AHDSGLPS +FAA++AEL LKS K+KQ XXXXX XXXXXXXX XXXXXXXXXXXXXXX E+HVPELDS+P+++VDF G LALRRRVAV+ETAKGF DRARDRAARA DHHPVTV+EQREFEALQNEKHR EARLRELEG ISKAT KG
Sbjct: 145 VRSPEHASLSPGKAEEVDPMVRAQFSSSAGLGPLIRENPEALEDIQRVIEATTVRSIHPDDELSDIQSRRNLGTLVTMSTALGEVALKHTEDMSVRRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSNWVSTSKTGGMGKVGAALKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAG---GSGCGRGADMMPGDMSEEDVFKYLLEEVTAYERNDHGGKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEALKSGRRXXXXXXXXXXXXXXXLERKVKKLEEHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAADHHPVTVSEQREFEALQNEKHREHEARLRELEGQISKATIRKG 652
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI) HSP 1 Score: 603 bits (1555), Expect = 2.200e-205 Identity = 365/526 (69.39%), Postives = 405/526 (77.00%), Query Frame = 1
Query: 115 DAPVPPGSTMQRPETAGGPVRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDALEDIQRVIAASTARSVYPDDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSALRSGLCQAYLAASVIDSDWVSTSNTGRMGKAGAALQLMSSAVPVVDGLAGLAGKALETGDHYLQTRRLVKITTTAPDAVECCSLARRLALQLTDSLRHDTSTTADDVGEVCASTTAGMNGGSRYGRSAHMMPGDMSEEDVFEHLLEEVSSYKRNDHGGNRLGKMHLRKLLKAIQRGCLDGSRCTEHKIEVLLLEILPEADDRPVATSSTPKEV-IRSPPVLAPAHDSGLPSMGDFAAMRAELQVLKSDKEKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKHVPELDSDPNEEVDFAGGLALRRRVAVTETAKGFFDRARDRAARAGDHHPVTVAEQREFEALQNEKHRGLEARLRELEGAISKAT 1689
DAPV S QR E G S SPEKA ++DR+F AQL SSAGLD+LI +NP ALE+IQ I A S YPD+EL DM RR LGTLVTMSTALGEVALRHTEDM+VQRKELALPPFSK YY+A+R+GLC+AYLAAS IDSDWV TS TG MGK GAAL+LMSSAVP++ GL LAGKALE GD YLQTRRLVKIT APD VECCSLARRLALQLTD LR++ S T DD +V +TTAG GS GR A MMPGDMSEEDVF++LLEEV++ +RNDHGG RLGK HLRKLLKAIQ GCLDGS T KI++LLLEILPEADD+P AT TPKEV +RSPP A AHDSGLPS +FAA++AEL LKS K+KQ XXXXX XXXXXXXX XXXXXXXXXXXXXX E+HVPELDS+P+++VDF G LALRRRVAV+ETAKGF DRARDRAARA DHHPVTV+EQREFEALQ+EKHR EARLRELEG I KAT
Sbjct: 321 DAPVLLDSPNQRQEVVAGSANSTGRASTSPEKAEEVDRLFRAQLVSSAGLDSLIRENPAALENIQLAIERQVAGSFYPDNELGDMQSRRNLGTLVTMSTALGEVALRHTEDMNVQRKELALPPFSKAYYTAIRTGLCKAYLAASAIDSDWVITSKTGGMGKVGAALKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAG---GSGCGRGADMMPGDMSEEDVFKYLLEEVTADERNDHGGKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEALKSGRRXXXXXXXXXXXXXXELERKVKKLEQHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAVDHHPVTVSEQREFEALQDEKHREHEARLRELEGQIIKAT 843
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI) HSP 1 Score: 521 bits (1342), Expect = 2.230e-173 Identity = 296/421 (70.31%), Postives = 325/421 (77.20%), Query Frame = 1
Query: 1 ETDEGDEKQEDAQISTAAXXXXXXXXXXXXXXXXXXXXDAPVPPGSTMQRPETAGGPVRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDALEDIQRVIAASTARSVYPDDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSALRSGLCQAYLAASVIDSDWVSTSNTGRMGKAGAALQLMSSAVPVVDGLAGLAGKALETGDHYLQTRRLVKITTTAPDAVECCSLARRLALQLTDSLRHDTSTTADDVGEVCASTTAGMNGGSRYGRSAHMMPGDMSEEDVFEHLLEEVSSYKRNDHGGNRLGKMHLRKLLKAIQRGCLDGSRCTEHKIEVLLLEILPEADDRPVATSSTPKEVI-RSPPVLAPAHDSGLPSMGDFAAMRAELQVLKSDKEKQ 1260
+T +GDEK+EDA XXX XXX D PVP G QR E RSPE LSP KA ++DR+FSAQLSSSAGLD+LI + P ALEDIQRVI ++ A SV PDD+LSD+DGRRKLGTLVTMSTALGEVALRHTEDM++QRKELALP FS YYSA+RSGLCQAYLAASVIDSDWVSTS TG MGKAGAA++LMSSAVPVV GL LAGKALE GDHYLQTRRLVKIT A DAV+CC LARRLALQLTD LR+D TAD+ EV TTAGMNGG A M PGDMSEEDVFE+LLEEV+SYKRNDHGG RLGK HLRKLLKAIQRG LDGS TE KIEVL+L+ILPEAD AT STPKEVI RSPPV+ PAHD GLPS +F AM+A L+ LK D+E Q
Sbjct: 333 QTLKGDEKEEDAPXXXXXXXXVLLPQQQETGEXXXNEKDNPVPLGFPNQREEAVWERARSPERASLSPGKAEEMDRLFSAQLSSSAGLDSLIREKPKALEDIQRVIESTVAGSVSPDDKLSDIDGRRKLGTLVTMSTALGEVALRHTEDMNIQRKELALPAFSNAYYSAVRSGLCQAYLAASVIDSDWVSTSKTGGMGKAGAAMKLMSSAVPVVGGLPELAGKALEAGDHYLQTRRLVKITAMASDAVDCCFLARRLALQLTDGLRNDAGATADNADEVRVDTTAGMNGG------ADMTPGDMSEEDVFEYLLEEVASYKRNDHGGVRLGKKHLRKLLKAIQRGSLDGSNGTEQKIEVLVLKILPEADTSLAATLSTPKEVIVRSPPVVTPAHDGGLPSRAEFTAMQAALEALKFDRETQ 747
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI) HSP 1 Score: 527 bits (1357), Expect = 3.960e-172 Identity = 380/695 (54.68%), Postives = 425/695 (61.15%), Query Frame = 1
Query: 136 STMQRPETAGGPVRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDALEDIQRVIAASTARSVYPDDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSALRSGLCQAYLAASVIDSDWVSTSNTGRMGKAGAALQLMSSAVPVVDGLAGLAGKALETGDHYLQTRRLVKITTTAPDAVECCSLARRLALQLTDSLRHDTSTTADDVGEVCASTTAGMNGGSRYGRSAHMMPGDMSEEDVFEHLLEEVSSYKRNDHGGNRLGKMHLRKLLKAIQRGCLDGSRCTEHKIEVLLLEILPEADDRPVATSSTPKEVI-RSPPVLAPAHDSGLPSMGDFAAMRAELQVLKSDKEKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKHVPELDSDPNEEVDFAGGLALRRRVAVTETAKGFFDRARDRAARAGDHHPVTVAEQREFEALQNEKHRGLEARLRELEGAISKATK 1692
S R GG VRSPE+ LSP KAA++DR+F QLSSSAGLD+LI++NP+ALEDIQRVI A A Y DDELSDM+ RRKLG L+ M+ ALGEVAL HTED DVQRKELAL PFSK YY+A+RSGLC AYLAASVIDSDWVSTS TG MGK G AL L+SSAVPV+ GLAGLAGKAL TGDHYLQTRRL KIT A D +ECCSLARRLALQLTD L+ DT D+ +VC TTAGMNGGS GR A ++P + E+DVFEHLLEEV+ Y+R+DHGG RLGK HLRKLLKAIQRGCLDGS + K+E+LLLEILPEAD R TS +PKEVI +SPP LAP H+ LPSM D AA++A ++ L S K+ Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EKH ELDS+P+++VD+ GGLA+R+RVAVTETA+GFFDRARDRA A DHHPVTVAEQREFEALQNEKH G EARLRELEG ISKATK
Sbjct: 445 SPTHRQAAVGGRVRSPENASLSPGKAAEVDRLFRVQLSSSAGLDSLIKENPEALEDIQRVIKAPAAGGFYFDDELSDMERRRKLGALMNMAKALGEVALSHTEDKDVQRKELALAPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTSKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHYLQTRRLAKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDETDQVCTHTTAGMNGGSGSGRDADILPDIIIEDDVFEHLLEEVARYERSDHGGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMELLLLEILPEADIRTSETSISPKEVIVQSPPALAPTHNGTLPSMADIAALQAAVEALTSAKDMQRAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVKKLEKHASELDSEPDDDVDYGGGLAVRQRVAVTETAQGFFDRARDRATTAADHHPVTVAEQREFEALQNEKHCGHEARLRELEGEISKATK 1139
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Match: D7FHA2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA2_ECTSI) HSP 1 Score: 487 bits (1253), Expect = 1.550e-161 Identity = 264/392 (67.35%), Postives = 305/392 (77.81%), Query Frame = 1
Query: 115 DAPVPPGSTMQRPETAGGPVRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDALEDIQRVIAASTARSVYPDDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSALRSGLCQAYLAASVIDSDWVSTSNTGRMGKAGAALQLMSSAVPVVDGLAGLAGKALETGDHYLQTRRLVKITTTAPDAVECCSLARRLALQLTDSLRHDTSTTADDVGEVCASTTAGMNGGSRYGRSAHMMPGDMSEEDVFEHLLEEVSSYKRNDHGGNRLGKMHLRKLLKAIQRGCLDGSRCTEHK----------IEVLLLEILPEADDRPVATSSTPKEVI-RSPPVLAPAHDSGLPSMGDFAAMRAELQVLKSDKEK 1257
DAPVPPGS R E G VRSPEH LSPEKA + DR+F AQLSSSAGLD+LI +NP ALEDIQRVI AS A SV D+ELSDM RRKLGTLVTMSTALGEV L+HTEDMDV+R+EL LPPFSK YY+A+R+G+C AYLAASVIDSDWVSTS TG MGKAGAAL++MS A+PVV G GLAGKA+++GDHYLQTRRLVKIT A DA+ECCSLARRLALQL LR+D + A++V + A TAGMNGGS G+ + +P MSE DVFE++L+EV+S NDHGG RLGK HLRKLLKA+QRGCLDG CTE K + VLLLEILPEAD R ATSS KEVI +S PV+ AHDSG PSM DFAA++A ++ LKSD ++
Sbjct: 283 DAPVPPGSRNGRHEAVGERVRSPEHASLSPEKAEEADRVFKAQLSSSAGLDSLIRENPGALEDIQRVIEASVAGSVSVDNELSDMQSRRKLGTLVTMSTALGEVVLKHTEDMDVKREELTLPPFSKAYYTAVRTGICNAYLAASVIDSDWVSTSKTGGMGKAGAALKVMSRAIPVVGGPTGLAGKAMKSGDHYLQTRRLVKITAMAHDAIECCSLARRLALQLAGGLRNDANAGANEVDHIRADITAGMNGGSGSGQGPNSLPAIMSEGDVFEYVLKEVASCGHNDHGGKRLGKKHLRKLLKAVQRGCLDGLSCTEQKARTRMSSRQQMAVLLLEILPEADIRHAATSSLLKEVIVKSLPVVGAAHDSGSPSMADFAALQAAVEELKSDNKQ 674
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Match: A0A6H5KZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE) HSP 1 Score: 478 bits (1230), Expect = 9.850e-153 Identity = 259/377 (68.70%), Postives = 291/377 (77.19%), Query Frame = 1
Query: 133 GSTMQRPETAGGPVRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDALEDIQRVIAASTARSVYPDDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSALRSGLCQAYLAASVIDSDWVSTSNTGRMGKAGAALQLMSSAVPVVDGLAGLAGKALETGDHYLQTRRLVKITTTAPDAVECCSLARRLALQLTDSLRHDTSTTADDVGEVCASTTAGMNGGSRYGRSAHMMPGDMSEEDVFEHLLEEVSSYKRNDHGGNRLGKMHLRKLLKAIQRGCLDGSRCTEHKIEVLLLEILPEADDRPVATSSTPKEVI-RSPPVLAPAHDSGLPSMGDFAAMRAELQVLKSDKEKQ 1260
GS QR E VRSPEH LSPEKA ++DR+F QLSSSAG D+LI +NP+ALEDI RVI A A S+ DE+SDM+ RRKLGTLV M+ ALGEVAL HTEDMDVQRKELAL PFSK YY+A+RSGLC AYLAASVIDSDWVST TG MGK G AL L+SSAVPV+ GLAGLAGKAL TGDH LQTRRLVKIT A D +ECCSLARRLALQLTD L+ DT D+ +V TAGMNGGS GR A + P DM E+DVFE+LLEEV+ Y+R+DHGG RLGK HLRKLLKAIQRGCLDGS + K+E LLLEILP AD R TSSTPK+VI RSPP LAP HD LPSM D AA++A ++VL K+KQ
Sbjct: 404 GSPNQREEVVREGVRSPEHASLSPEKAEEVDRLFRVQLSSSAGFDSLIRENPEALEDIHRVIKAPAAGSLDFVDEISDMERRRKLGTLVNMAKALGEVALSHTEDMDVQRKELALTPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTCKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHCLQTRRLVKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDEADQVYTHITAGMNGGSGSGRDADISPDDMIEDDVFEYLLEEVARYERSDHGGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMEALLLEILPGADIRTSETSSTPKKVIVRSPPALAPTHDGRLPSMADIAALQAAVEVLTLAKDKQ 780
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI) HSP 1 Score: 254 bits (650), Expect = 8.140e-71 Identity = 228/551 (41.38%), Postives = 311/551 (56.44%), Query Frame = 1
Query: 136 STMQRPETAGGPVRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDALEDIQRVIAASTARSVYPDDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSALRSGLCQAYLAASVIDSDWVSTSNTGRMGKAGAALQLMSSAVPVVDGLAGLAGKALETGDHYLQTRRLVKITTTAPDAVECCSLARRLALQLTDSLRHDTSTTADDVGEVCASTTAGMNG---GSRYGRSAHMMPGDMSEEDVFEHLLEEVSSYKRND----------HGGNRLGKMHLRKLLKAIQRGCLDGSRCTEHKIEVLLLEILPEADDRPVATSSTPKE-----VIRSPPVLAPAHDSGL-PSMGDFAA-----MRAELQVLKSDKEKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKHVPELDSDPNEEVDFAGGLALRRRVAVTETA-KGFFDRARDRAARAGDHHPVTVAEQ-------REFEALQNEKHRGLEARLRELEGAISKATK 1692
S+ + + G R+ + A +D M AQ+SS + L TL + LE +++++ A P LS+ +L LV M+ LG++ RH + D+QR+ELALPP K YY+A+R+GLC AYLAASV+ S V TS TGRMG AG L+ +SSAVPVV GLAGLA AL+ GD YLQTRR+ KI APD+ +CC LAR LALQL+D T T D E + TAGM G G + + P +EE V + +EEV+ Y+ N+ G +LGK HL+ LLKA+ R CL G+ + K++VL+ ILPEA+ R +TS +E + P +H + P++ D AA + A ++ + S + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K V + D + V GGLAL++R AVTETA F +RA++RA AG+ VT+ + +E + +E HR +A+L +GA+ + T+
Sbjct: 378 SSSTQGDKPGKTDRATTEPISGSSREADMDHMTQAQISSFSALSTLCGGSHKRLEQVRQLVEALDINRFSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHVTRERTNHDASSAQPASRQSHAAATRPAVPDGAAKSDIDVAALMERVASMRMRTEATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILNKKVMKPGPDSDSLVASGGGLALKQRQAVTETALDDFLERAQERAPAAGND-VVTLGQLAEAVELLKEVHSKNDELHREHDAKLTRFQGAVDRITR 927
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Match: A0A6H5KJV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV0_9PHAE) HSP 1 Score: 241 bits (615), Expect = 3.300e-69 Identity = 139/231 (60.17%), Postives = 158/231 (68.40%), Query Frame = 1
Query: 145 QRPETAGGPVRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDALEDIQRVIAASTARSVYPDDELSDMDGRRKLGTLVTMSTALGEVA-------------------------------LRHTEDMDVQRKELALPPFSKEYYSALRSGLCQAYLAASVIDSDWVSTSNTGRMGK---------AGAALQLMSSAVPVVDGLAGLAGKALETGDHYLQTRRLVK 717
QR E VRSPE LSPEK ++DR+F+AQLSS AGL++L+ +NP+ALEDIQRVI ++ RS YPDD+ SDMDGRRKL TLVTMSTALGEVA LRHTEDMDVQRKE+ALP F K Y + +RSGLCQAYLA+SVIDSDWVS S TG MGK AGAA++LMS AVPVV GL LAGKALE GDH+ QTRRLVK
Sbjct: 135 QREEVVRERVRSPERASLSPEKTEEVDRLFTAQLSSHAGLNSLVRENPEALEDIQRVIQSTVVRSFYPDDKHSDMDGRRKLATLVTMSTALGEVAVSPVRGTIPSACTSNGLTSFSVRNWCRIWNVLRHTEDMDVQRKEMALPLFLKAYCTVVRSGLCQAYLASSVIDSDWVSMSKTGGMGKVGAALGSKSAGAAVKLMSRAVPVVGGLPELAGKALEAGDHFFQTRRLVK 365
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI) HSP 1 Score: 239 bits (609), Expect = 1.620e-64 Identity = 147/349 (42.12%), Postives = 199/349 (57.02%), Query Frame = 1
Query: 136 STMQRPETAGGPVRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDALEDIQRVIAASTARSVYPDDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSALRSGLCQAYLAASVIDSDWVSTSNTGRMGKAGAALQLMSSAVPVVDGLAGLAGKALETGDHYLQTRRLVKITTTAPDAVECCSLARRLALQLTDSLRHDTSTTADDVGEVCASTTAGMNG---GSRYGRSAHMMPGDMSEEDVFEHLLEEVSSYKRND----------HGGNRLGKMHLRKLLKAIQRGCLDGSRCTEHKIEVLLLEILPEADDRPVATSSTPKE 1143
S+ + + G P R+ + A +D M AQ+SS + L TL +LE +++++ A P LS+ ++ LV M+ LG + RH + D+QR+ELALPP K YY+A+R+GLC AYLAASV+ S V TS TGRMG AG L+ +SSAVPVV GLAGLA AL+ GD YLQTRR+ KI APD+ +CC LAR LALQL+D T T D E TTAGM G G + + P +EE V + +EEV+ Y+ N+ G +LG HL+ LLKA+ R CL G+ + K++VL+ ILPEA+ R +TS +E
Sbjct: 590 SSSTQGDKPGKPDRATTGPISGSSREADMDDMTQAQISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLSETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGAAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHGTRE 938
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI) HSP 1 Score: 231 bits (590), Expect = 1.980e-62 Identity = 143/349 (40.97%), Postives = 196/349 (56.16%), Query Frame = 1
Query: 136 STMQRPETAGGPVRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDALEDIQRVIAASTARSVYPDDELSDMDGRRKLGTLVTMSTALGEVALRHTEDMDVQRKELALPPFSKEYYSALRSGLCQAYLAASVIDSDWVSTSNTGRMGKAGAALQLMSSAVPVVDGLAGLAGKALETGDHYLQTRRLVKITTTAPDAVECCSLARRLALQLTDSLRHDTSTTADDVGEVCASTTAGMNGGSR---YGRSAHMMPGDMSEEDVFEHLLEEVSSYKRND----------HGGNRLGKMHLRKLLKAIQRGCLDGSRCTEHKIEVLLLEILPEADDRPVATSSTPKE 1143
S+ + + G P + + A +D + AQ+SS + L TL + +LE + +++ A P L+ +L LV M+ LG++ RH + D+QR+ELALPP K YY+A+R+GLC AYLAASV+ S V TS TGRMG AG L+ +SSAVPVV GLAGLA AL+ GD YLQTRR+ KI APD+ +CC LAR LALQL+D T T D E TTAGM G + + P +EE V + +EEV+ Y+ N G +LG HL+ LLKA+ R CL G+ + K++VL+ ILPEA+ + +TS +E
Sbjct: 405 SSSTQGDKPGKPDGATTEPISGSSREADMDHITQAQISSFSSLSTLCGGSQASLEQVGQLVEALGINRSSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQE 753 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6463.17241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6463.17241.1 >prot_Ecto-sp13_S_contig6463.17241.1 ID=prot_Ecto-sp13_S_contig6463.17241.1|Name=mRNA_Ecto-sp13_S_contig6463.17241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=520bp MQRPETAGGPVRSPEHDFLSPEKAAKLDRMFSAQLSSSAGLDTLIEKNPDback to top mRNA from alignment at Ecto-sp13_S_contig6463:3149..7373- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6463.17241.1 ID=mRNA_Ecto-sp13_S_contig6463.17241.1|Name=mRNA_Ecto-sp13_S_contig6463.17241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6463:3149..7373- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6463:3149..7373- >mRNA_Ecto-sp13_S_contig6463.17241.1 ID=mRNA_Ecto-sp13_S_contig6463.17241.1|Name=mRNA_Ecto-sp13_S_contig6463.17241.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1560bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6463:3149..7373- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |