prot_Ecto-sp13_S_contig6453.17223.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6453.17223.1
Unique Nameprot_Ecto-sp13_S_contig6453.17223.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length76
Homology
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 1.190e-38
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 0
Query:    1 MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMVTGNTLIIFFVNPWVVLSLLPALWYLV 76
            MLKRVVRAP+LFFDSNPVGRILNRFTKDMHFMDDLLPMT+YDC+ C+FMV GNTLIIFFVNPWVVLSLLPA+WY V
Sbjct:  933 MLKRVVRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDCITCSFMVMGNTLIIFFVNPWVVLSLLPAMWYFV 1008          
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 1.620e-38
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 0
Query:    1 MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMVTGNTLIIFFVNPWVVLSLLPALWYLV 76
            MLKRVVRAP+LFFDSNPVGRILNRFTKD+HFMDDLLPMT+YDC+MC FMV GNTLIIFFVNPWVVLSLLPA+WY V
Sbjct:  902 MLKRVVRAPVLFFDSNPVGRILNRFTKDVHFMDDLLPMTLYDCIMCGFMVMGNTLIIFFVNPWVVLSLLPAMWYFV 977          
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 7.670e-38
Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 0
Query:    1 MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMVTGNTLIIFFVNPWVVLSLLPALWYLV 76
            ML+RVVRAP+LFFDSNPVGRILNRFTKDMHFMDDLLPMT+YDCV C+FMVTGNTLII FVNPWVVLSLLPALW+ +
Sbjct:  852 MLERVVRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDCVTCSFMVTGNTLIILFVNPWVVLSLLPALWFFI 927          
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 9.220e-37
Identity = 65/74 (87.84%), Postives = 72/74 (97.30%), Query Frame = 0
Query:    1 MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMVTGNTLIIFFVNPWVVLSLLPALWY 74
            MLKRVVRAP+LFFDSNPVGRILNRFTKDMHFMDDLLPMT+YD ++C+FMVTG TLIIFFVNPWVVLS++PALWY
Sbjct:  953 MLKRVVRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFIICSFMVTGGTLIIFFVNPWVVLSMVPALWY 1026          
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Match: D8LSW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW6_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.720e-36
Identity = 64/74 (86.49%), Postives = 72/74 (97.30%), Query Frame = 0
Query:    1 MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMVTGNTLIIFFVNPWVVLSLLPALWY 74
            MLKRVVRAP+LFFDSNPVGRILNRFTKDMHFMDDLLPMT+YD ++C+FMVTG TLIIFFVNPWVVLS++PA+WY
Sbjct: 1144 MLKRVVRAPVLFFDSNPVGRILNRFTKDMHFMDDLLPMTLYDFIICSFMVTGGTLIIFFVNPWVVLSMVPAMWY 1217          
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Match: A0A2T7NCR6_POMCA (Uncharacterized protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NCR6_POMCA)

HSP 1 Score: 87.0 bits (214), Expect = 2.970e-18
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    1 MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMVTGNTLIIFFVNPWVVLSLLP 70
            M  R++RAPI FFD+NPVGRILNRF KD+  MDDLLP+T +D V C  ++ G  L+  FVNPWV +  LP
Sbjct:  794 MFTRILRAPISFFDTNPVGRILNRFAKDVGHMDDLLPITFFDFVQCFLLIIGIILVAGFVNPWVFIPTLP 863          
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Match: UPI000D73D83D (multidrug resistance-associated protein 4-like isoform X3 n=5 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D73D83D)

HSP 1 Score: 87.0 bits (214), Expect = 2.970e-18
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    1 MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMVTGNTLIIFFVNPWVVLSLLP 70
            M  R++RAPI FFD+NPVGRILNRF KD+  MDDLLP+T +D V C  ++ G  L+  FVNPWV +  LP
Sbjct:  805 MFTRILRAPISFFDTNPVGRILNRFAKDVGHMDDLLPITFFDFVQCFLLIIGIILVAGFVNPWVFIPTLP 874          
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Match: UPI0014580DF4 (multidrug resistance-associated protein 4-like isoform X1 n=3 Tax=Pecten maximus TaxID=6579 RepID=UPI0014580DF4)

HSP 1 Score: 85.5 bits (210), Expect = 1.030e-17
Identity = 37/70 (52.86%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    1 MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMVTGNTLIIFFVNPWVVLSLLP 70
            M  R++R PI+FFD+NPVGRILNRF+KD   MDD+LP+T +D + C  ++ G  L++  VNPWV + L P
Sbjct:  810 MFNRLLRVPIMFFDTNPVGRILNRFSKDTGHMDDILPITFFDFIQCFLLILGIVLVVCIVNPWVFIPLFP 879          
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Match: A0A820FD32_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A820FD32_9BILA)

HSP 1 Score: 82.8 bits (203), Expect = 1.420e-17
Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    1 MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMVTGNTLIIFFVNPWVVLSLLPAL 72
            M KR++R PI FFD+NPVGRILNRFT D+  MDD LPM V D ++C   V G  +++ F+NPW   S +PA+
Sbjct:    1 MFKRIIRCPISFFDTNPVGRILNRFTTDVATMDDSLPMIVLDFLVCLSQVLGTIILVVFINPW---SFIPAI 69          
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Match: A0A6P5AX34_BRABE (multidrug resistance-associated protein 4-like isoform X1 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AX34_BRABE)

HSP 1 Score: 84.3 bits (207), Expect = 2.630e-17
Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    1 MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMVTGNTLIIFFVNPWVVLSLLPALWYLV 76
            M  RVVRAP+LFFDSNPVGRILNRF+KD+  +DDLLP  + D V  T  V G  ++   +NPWV + ++P +  LV
Sbjct:  814 MFSRVVRAPVLFFDSNPVGRILNRFSKDLGHLDDLLPSIILDFVTITMQVLGGVILAGVINPWVFIPVVPVVLLLV 889          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6453.17223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSW4_ECTSI1.190e-3889.47Multidrug resistance-associated protein-like prote... [more]
D8LSW3_ECTSI1.620e-3889.47Multidrug resistance-associated protein-like prote... [more]
A0A6H5JDL0_9PHAE7.670e-3888.16ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5JDN6_9PHAE9.220e-3787.84ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LSW6_ECTSI1.720e-3686.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2T7NCR6_POMCA2.970e-1858.57Uncharacterized protein n=1 Tax=Pomacea canalicula... [more]
UPI000D73D83D2.970e-1858.57multidrug resistance-associated protein 4-like iso... [more]
UPI0014580DF41.030e-1752.86multidrug resistance-associated protein 4-like iso... [more]
A0A820FD32_9BILA1.420e-1754.17Hypothetical protein (Fragment) n=1 Tax=Rotaria so... [more]
A0A6P5AX34_BRABE2.630e-1753.95multidrug resistance-associated protein 4-like iso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 1..76
e-value: 4.0E-13
score: 51.3
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 1..73
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 1..72
e-value: 1.8E-13
score: 50.8
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..76
score: 14.981
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 1..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..75
NoneNo IPR availableTMHMMTMhelixcoord: 55..74
IPR030244Oligomycin resistance ATP-dependent permease Yor1PANTHERPTHR24223:SF271LD28489P-RELATEDcoord: 1..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6453contigEcto-sp13_S_contig6453:3708..5728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6453.17223.1mRNA_Ecto-sp13_S_contig6453.17223.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6453 3704..5728 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6453.17223.1 ID=prot_Ecto-sp13_S_contig6453.17223.1|Name=mRNA_Ecto-sp13_S_contig6453.17223.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp
MLKRVVRAPILFFDSNPVGRILNRFTKDMHFMDDLLPMTVYDCVMCTFMV
TGNTLIIFFVNPWVVLSLLPALWYLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036640ABC1_TM_sf
IPR011527ABC1_TM_dom
IPR030244Yor1