mRNA_Ecto-sp13_S_contig6449.17216.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: D7G2C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI) HSP 1 Score: 373 bits (958), Expect = 3.180e-111 Identity = 220/251 (87.65%), Postives = 223/251 (88.84%), Query Frame = 1
Query: 187 KLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVGAGLEA-------PEGEEAEXXXXKPAVDXXXXXXXXXXXXGRTHPS 918
KLGDSVVQFFTKTKAEMTGDADTVGAGAK+LVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMERE+DGQLQREVK LEHGVKQGGKVFYET+KAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXX VSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVG GLEA PEGEEAE KPA D GR HPS
Sbjct: 1177 KLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREEDGQLQREVKGLEHGVKQGGKVFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXAVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVGTGLEATGVALPVPEGEEAEERDRKPAGDVGSGRGGEDGAGGRAHPS 1427
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE) HSP 1 Score: 374 bits (961), Expect = 3.350e-110 Identity = 221/251 (88.05%), Postives = 224/251 (89.24%), Query Frame = 1
Query: 187 KLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVGAGLEA-------PEGEEAEXXXXKPAVDXXXXXXXXXXXXGRTHPS 918
KLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLE GVKQGGK+FYET+KAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTP DLVKN+PRKFATLWVG GLEA PEGE AE KPAVD GRTHPS
Sbjct: 2838 KLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEQGVKQGGKIFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPIDLVKNIPRKFATLWVGTGLEATGVALPVPEGEGAEERDRKPAVDVGSGRGSEGGAGGRTHPS 3088
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A835YJU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.210e-37 Identity = 94/181 (51.93%), Postives = 118/181 (65.19%), Query Frame = 1
Query: 187 KLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGK--------VFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTA 705
KL DSV+QF T+AE G+ T GAGA++LV G+VGG FGSAAKI GSLE +IRGLSGT +A+ E G V+ L+HG ++GG+ V Y++I+ GI+GL+DRP EGAKEEG+AGF+ GMAKG VS+VTEGVDASTR +RMGRRR R+A
Sbjct: 402 KLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAE--------GGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSA 574
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A7S2GN42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA) HSP 1 Score: 110 bits (276), Expect = 4.730e-22 Identity = 73/195 (37.44%), Postives = 106/195 (54.36%), Query Frame = 1
Query: 190 LGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVP 774
+G V QFF KT A+M G+++T G G K L +G+VGGTFGS AKITG+ + ++ ++G +N E + G+ G + + + GITG++ RP EGA++ G+ GF+ G+ KG VS VTE VDA+ + DE+ MGRRR R+ TG L PLT + L +N+P
Sbjct: 330 MGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSAVTGQNERDNWQRPEH------------VGQGIVIGSERVWRGVTEGITGIVVRPIEGAQQNGVPGFLFGLGKGVVGAVAAPVAGAFGAVSAVTESVDANLKYWDERPMGRRRNTRSG-----TG-LLQPLTVSHLNENIP 506
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 1.540e-16 Identity = 64/172 (37.21%), Postives = 94/172 (54.65%), Query Frame = 1
Query: 184 VKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAAR 699
+ + V+ F TKT A +G G+K LVKG+VGGT SA+K+T +L+ +R +G AE S ME + + L G+ QG F T+K GITG++ +P GA++ G AGF+ G+ +G S++T G+DA+TRL D++ MGRRR R
Sbjct: 2688 MNISSGVIGFVTKT------GAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVR-EAGCMDAEAPSGMEST------KAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDEPMGRRREPR 2846
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A6H5KB17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 6.210e-14 Identity = 77/172 (44.77%), Postives = 105/172 (61.05%), Query Frame = 1
Query: 184 VKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAAR 699
+ + V+ F TKT A +G G+K LVKG+VGGT SA+K+T +L+ +R +G AE S ME + + + L G+ QG F T+K GITG++ +P GA++ G AGF+ XXXXXXXXXXXXXXX S++T G+DA+TRL D+ MGRRR R
Sbjct: 1592 MNISSGVIGFVTKT------GAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVR-EAGCMDAEAPSGMESK------KAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGAAGFVKXXXXXXXXXXXXXXXXXXXXXSKITAGIDATTRLLDDDPMGRRREPR 1750
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A485KYR2_9STRA (Aste57867_13032 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYR2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 6.060e-8 Identity = 46/161 (28.57%), Postives = 79/161 (49.07%), Query Frame = 1
Query: 220 KTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRM-GRRRAAR 699
+TK + TG + + G GA L+K ++G G+ K++ + +++ + D +++ E + GV QGG VF ++ G++GL+ +P EGAK+ G GF G+ +G V ++++ V +T L DEK G RR AR
Sbjct: 2445 QTKRDFTGKSRSKGQGAVTLMKTVIGAPSGAIGKMSNGVGDLLKKAT------------HFDSQEMENEPRHFPEGVLQGGMVFGMSLAHGVSGLVTKPMEGAKQNGFGGFAKGVGQGALGLVASPFVGAIGVVEKLSQSVHNTTHLMDEKYFEGTRRIAR 2593
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A078BDF7_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078BDF7_STYLE) HSP 1 Score: 65.5 bits (158), Expect = 3.150e-7 Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 187 KLGDSVVQFFTKT-KAEMTGDADTVGA---GAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEH---GVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKG 573
KLG V +FF + K + G + VG G K LV +V G+F S +KITGSL G+++ +SG + + +++K EH G+ QG K + G+TG+ +P + AKEEG GF+ G+ G
Sbjct: 2834 KLGTGVFEFFNEPRKGLVKGPKEFVGGVGKGVKSLVTNIVSGSFDSVSKITGSLYGVVKNVSGDQVTD--------------QQLKKPEHVFDGIYQGLKGGGGELLGGLTGIFTKPYQKAKEEGAKGFVKGLGAG 2955
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: R7VFD3_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VFD3_CAPTE) HSP 1 Score: 65.1 bits (157), Expect = 4.160e-7 Identity = 42/141 (29.79%), Postives = 71/141 (50.35%), Query Frame = 1
Query: 247 ADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDE 669
A+ + G + L VGG G+ ++ITG+L +GL+ + ++ + RE Q+ + D + G+ +GGK + G+TG++ +P EGAK++G AGF G+ KG S EG+ + +SDE
Sbjct: 3100 AEGLALGVRSLFGHAVGGAAGAVSRITGALG---KGLATLTLDDDYQKKRRE---QMNKRPADFKEGLARGGKGLVMGVVDGVTGIVRKPVEGAKQDGAAGFFKGVGKGLVGAFTRPASGVVDFASSSFEGIRRAAEMSDE 3234
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: T1G0Z3_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G0Z3_HELRO) HSP 1 Score: 63.9 bits (154), Expect = 7.750e-7 Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 247 ADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKG 573
A+ + G + L+ VGG G+ ++ITG+L +G++ T +NE + +R +D + ++ DL+ G +GGK + G+TG++ +P EGAK+EG+ GF GM KG
Sbjct: 761 AEGLALGVRSLLGHAVGGAAGAVSRITGALG---KGIA-TLTMDNEYQKKRRED--MNKKPADLKEGFARGGKGLVMGVFDGVTGIVMKPVEGAKQEGVGGFFKGMGKG 863 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6449.17216.1 >prot_Ecto-sp13_S_contig6449.17216.1 ID=prot_Ecto-sp13_S_contig6449.17216.1|Name=mRNA_Ecto-sp13_S_contig6449.17216.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp MTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENEback to top mRNA from alignment at Ecto-sp13_S_contig6449:3724..7372- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6449.17216.1 ID=mRNA_Ecto-sp13_S_contig6449.17216.1|Name=mRNA_Ecto-sp13_S_contig6449.17216.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3649bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6449:3724..7372- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6449:3724..7372- >mRNA_Ecto-sp13_S_contig6449.17216.1 ID=mRNA_Ecto-sp13_S_contig6449.17216.1|Name=mRNA_Ecto-sp13_S_contig6449.17216.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=687bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6449:3724..7372- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |