prot_Ecto-sp13_S_contig6449.17216.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6449.17216.1
Unique Nameprot_Ecto-sp13_S_contig6449.17216.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length229
Homology
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: D7G2C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 9.100e-108
Identity = 207/235 (88.09%), Postives = 210/235 (89.36%), Query Frame = 0
Query:    1 MTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVGAGLEA-------PEGEEAEERXRKPAVDXXXXXXXXXXXXGRTHPS 228
            MTGDADTVGAGAK+LVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMERE+DGQLQREVK LEHGVKQGGKVFYET+KAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXX VSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVG GLEA       PEGEEAEER RKPA D            GR HPS
Sbjct: 1193 MTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREEDGQLQREVKGLEHGVKQGGKVFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXAVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVGTGLEATGVALPVPEGEEAEERDRKPAGDVGSGRGGEDGAGGRAHPS 1427          
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE)

HSP 1 Score: 349 bits (895), Expect = 2.870e-107
Identity = 208/235 (88.51%), Postives = 211/235 (89.79%), Query Frame = 0
Query:    1 MTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVGAGLEA-------PEGEEAEERXRKPAVDXXXXXXXXXXXXGRTHPS 228
            MTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLE GVKQGGK+FYET+KAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTP DLVKN+PRKFATLWVG GLEA       PEGE AEER RKPAVD            GRTHPS
Sbjct: 2854 MTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEQGVKQGGKIFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPIDLVKNIPRKFATLWVGTGLEATGVALPVPEGEGAEERDRKPAVDVGSGRGSEGGAGGRTHPS 3088          
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A835YJU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.280e-34
Identity = 84/163 (51.53%), Postives = 106/163 (65.03%), Query Frame = 0
Query:    3 GDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGK--------VFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTA 157
            G+  T GAGA++LV G+VGG FGSAAKI GSLE +IRGLSGT +A+ E        G     V+ L+HG ++GG+        V Y++I+ GI+GL+DRP EGAKEEG+AGF+ GMAKG               VS+VTEGVDASTR    +RMGRRR  R+A
Sbjct:  420 GEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAE--------GGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSA 574          
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A7S2GN42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.400e-19
Identity = 65/180 (36.11%), Postives = 96/180 (53.33%), Query Frame = 0
Query:    1 MTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVP 180
            M G+++T G G K L +G+VGGTFGS AKITG+ + ++  ++G    +N    E             +  G+  G +  +  +  GITG++ RP EGA++ G+ GF+ G+ KG               VS VTE VDA+ +  DE+ MGRRR  R+      TG  L PLT + L +N+P
Sbjct:  345 MLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSAVTGQNERDNWQRPEH------------VGQGIVIGSERVWRGVTEGITGIVVRPIEGAQQNGVPGFLFGLGKGVVGAVAAPVAGAFGAVSAVTESVDANLKYWDERPMGRRRNTRSG-----TG-LLQPLTVSHLNENIP 506          
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 2.610e-17
Identity = 59/151 (39.07%), Postives = 86/151 (56.95%), Query Frame = 0
Query:    5 ADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAAR 155
            A  +G G+K LVKG+VGGT  SA+K+T +L+  +R  +G   AE  S ME        +  + L  G+ QG   F  T+K GITG++ +P  GA++ G AGF+ G+ +G                S++T G+DA+TRL D++ MGRRR  R
Sbjct: 2703 AGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVR-EAGCMDAEAPSGMEST------KAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDEPMGRRREPR 2846          
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A6H5KB17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.050e-14
Identity = 72/151 (47.68%), Postives = 97/151 (64.24%), Query Frame = 0
Query:    5 ADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAAR 155
            A  +G G+K LVKG+VGGT  SA+K+T +L+  +R  +G   AE  S ME +      +  + L  G+ QG   F  T+K GITG++ +P  GA++ G AGF+      XXXXXXXXXXXXXXX S++T G+DA+TRL D+  MGRRR  R
Sbjct: 1607 AGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVR-EAGCMDAEAPSGMESK------KAPEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGAAGFVKXXXXXXXXXXXXXXXXXXXXXSKITAGIDATTRLLDDDPMGRRREPR 1750          
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: R7VFD3_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VFD3_CAPTE)

HSP 1 Score: 64.3 bits (155), Expect = 3.120e-8
Identity = 42/141 (29.79%), Postives = 71/141 (50.35%), Query Frame = 0
Query:    5 ADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDE 145
            A+ +  G + L    VGG  G+ ++ITG+L    +GL+   + ++  +  RE   Q+ +   D + G+ +GGK     +  G+TG++ +P EGAK++G AGF  G+ KG                S   EG+  +  +SDE
Sbjct: 3100 AEGLALGVRSLFGHAVGGAAGAVSRITGALG---KGLATLTLDDDYQKKRRE---QMNKRPADFKEGLARGGKGLVMGVVDGVTGIVRKPVEGAKQDGAAGFFKGVGKGLVGAFTRPASGVVDFASSSFEGIRRAAEMSDE 3234          
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: T1G0Z3_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G0Z3_HELRO)

HSP 1 Score: 63.2 bits (152), Expect = 6.890e-8
Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = 0
Query:    5 ADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKG 113
            A+ +  G + L+   VGG  G+ ++ITG+L    +G++ T   +NE + +R +D  + ++  DL+ G  +GGK     +  G+TG++ +P EGAK+EG+ GF  GM KG
Sbjct:  761 AEGLALGVRSLLGHAVGGAAGAVSRITGALG---KGIA-TLTMDNEYQKKRRED--MNKKPADLKEGFARGGKGLVMGVFDGVTGIVMKPVEGAKQEGVGGFFKGMGKG 863          
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A485KYR2_9STRA (Aste57867_13032 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYR2_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.380e-7
Identity = 44/155 (28.39%), Postives = 75/155 (48.39%), Query Frame = 0
Query:    2 TGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRM-GRRRAAR 155
            TG + + G GA  L+K ++G   G+  K++  +  +++  +              D  +++ E +    GV QGG VF  ++  G++GL+ +P EGAK+ G  GF  G+ +G               V ++++ V  +T L DEK   G RR AR
Sbjct: 2451 TGKSRSKGQGAVTLMKTVIGAPSGAIGKMSNGVGDLLKKAT------------HFDSQEMENEPRHFPEGVLQGGMVFGMSLAHGVSGLVTKPMEGAKQNGFGGFAKGVGQGALGLVASPFVGAIGVVEKLSQSVHNTTHLMDEKYFEGTRRIAR 2593          
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Match: A0A1W0X5L9_HYPDU (Vacuolar protein sorting-associated protein 13A n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0X5L9_HYPDU)

HSP 1 Score: 62.0 bits (149), Expect = 1.880e-7
Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = 0
Query:   11 GAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKEEGLAGFIAGMAKG 113
            G K  V G +GGT G+  ++TG+L   +  LS       + E +     +L R   D   G+   G+        G+TG++ RP EGAKEEGL GF+ G+ KG
Sbjct: 3030 GLKNFVGGTLGGTMGAVGRVTGTLGRAMAALS------FDQEFQERRQAELNRNTGDFAGGMASSGRHLVSGFVEGVTGVVRRPMEGAKEEGLEGFVKGLGKG 3126          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6449.17216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C7_ECTSI9.100e-10888.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWU7_9PHAE2.870e-10788.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJU6_9STRA1.280e-3451.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2GN42_9STRA4.400e-1936.11Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
D8LB75_ECTSI2.610e-1739.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB17_9PHAE2.050e-1447.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
R7VFD3_CAPTE3.120e-829.79Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
T1G0Z3_HELRO6.890e-835.78Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
A0A485KYR2_9STRA1.380e-728.39Aste57867_13032 protein n=1 Tax=Aphanomyces stella... [more]
A0A1W0X5L9_HYPDU1.880e-735.92Vacuolar protein sorting-associated protein 13A n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015412Autophagy-related, C-terminalPFAMPF09333ATG_Ccoord: 66..146
e-value: 1.8E-8
score: 34.6
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 8..152
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 8..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6449contigEcto-sp13_S_contig6449:4650..7138 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6449.17216.1mRNA_Ecto-sp13_S_contig6449.17216.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6449 3724..7372 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6449.17216.1 ID=prot_Ecto-sp13_S_contig6449.17216.1|Name=mRNA_Ecto-sp13_S_contig6449.17216.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp
MTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENE
SEMEREDDGQLQREVKDLEHGVKQGGKVFYETIKAGITGLIDRPAEGAKE
EGLAGFIAGMAKGIVGAVAAPVAGALGAVSRVTEGVDASTRLSDEKRMGR
RRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVGAGLEAPEGEEA
EERDRKPAVDVGSGGGGEGGAGGRTHPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015412Autophagy-rel_C
IPR026847VPS13