mRNA_Ecto-sp13_S_contig6439.17201.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6439.17201.1
Unique NamemRNA_Ecto-sp13_S_contig6439.17201.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6439.17201.1 vs. uniprot
Match: A0A6H5KBC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBC9_9PHAE)

HSP 1 Score: 961 bits (2483), Expect = 0.000e+0
Identity = 580/667 (86.96%), Postives = 602/667 (90.25%), Query Frame = 1 
Query:  277 MPPSSTSSASGLSSTAGARRGGEGCGWSAAGAVKGECVMSPVKQEPGVEGGEIGEGGATSGFAGAGAVGDAGVTAWLGDDHASVKREQPRGRRRGDEKTRVGQPRLEDEEKEEESEKQPVPIMSSATPRAQLQPWLLERPQQWLLLQQQXXXXXXXXXXXXRQPKQPGVEEVQEGDEAEAAGGVECFGEDVSTDEAFLDWADVLAGSPDPPALNDSALPDVNIQGLDTSVGGSSAATAETAAGGLLSEPERPRSVSHSVFSIGSDGSWRPATERTGLDLGALREEAPVNGGRPRPGDGPGGRWGGSESHHHRQRLDQDTSADRGARSVSDSALCGAAPSAQRALPGEGTAWDLLFTRCAERSTPPVIGTGGLSSTADTRRAPAQGALTAAAGGSPGMCALSGADGGGGVGASTQQQGQPPLPLDVDFSDLLLTPEELFRPPXXXXXXXXXXXXXXXXXXXXXXGS--GNLLTMQTLGIFNQTLLSDLPWANYGVSGGNCDAFRDPAAGAAPATXXXXXXXXXIGGMLDGGSWASATPSAGLAGLGQQSRGGDETAAGAPPHHKNPGGVTGSKGGFSAAASAASTAMDLSADGNELTGCQLGGAWPMQGGMLFSRTPLDAEAEMGSTNRGLGDAWGGGGDVPGGDLRNTSGHPSQSMSNFSSAPNGFG 2271
            MPP STSSASGL  TAGARRGGEG G SAAGA KGEC MSPV+QE GVE G++ +GGAT+GFAGAGAVGDAG+TAWL DD ASV REQPRGRR GD+KT VGQPRLEDEEKEEESEK PVP++SSAT R  LQPWLLERPQQWLL QQQXXXXXXXXXXXX QPKQPG +EVQEGD AEAAGGVE FGEDVSTDEAFLDWADVLAGSP PPALNDS LP+V +QGLDTSVGGSSAAT ETAAGGLLS PERPRSVSHSV SIGSDGSWRPATERTGLDLGALREEAPVNGGRPR GDGPGGRWGGSESHHHR RL QD SAD GARSVSDSALC  APS +R LPGEGTAWDLLFTRCAER TPPVIGTGGLSSTADTRRAPAQG LTAAAGGSPGMC LSGADGG GVGASTQQQGQPPLPL VDFSDLLLTPEELFRP XXXXXXXXXXXXXXXXXXXXXX    GNLLTMQTLG+FN TLLSDLPWANYGVSGGNCDAFRDPAAG APA XXXXXXXXXIGGML  GSWASA PS GLA LGQQSRGGDETA+GAPPHHKN GGVTG +GG SAAASAASTAMDLSADGN+LTGCQLGGAWP+QG MLFSR PLDAEAE+GSTNRGLGDAWGGGGD+PGGDLRNTSGH  QS+S+FSSAPNG G
Sbjct:    1 MPPPSTSSASGLCFTAGARRGGEGGGRSAAGAGKGECAMSPVEQELGVEEGDLRKGGATAGFAGAGAVGDAGLTAWLADDRASVTREQPRGRR-GDDKTCVGQPRLEDEEKEEESEKHPVPLLSSATQRTPLQPWLLERPQQWLL-QQQXXXXXXXXXXXXXQPKQPGEQEVQEGDMAEAAGGVEGFGEDVSTDEAFLDWADVLAGSPSPPALNDSTLPEVYVQGLDTSVGGSSAATVETAAGGLLSVPERPRSVSHSVVSIGSDGSWRPATERTGLDLGALREEAPVNGGRPRLGDGPGGRWGGSESHHHRHRLTQDMSADGGARSVSDSALCVTAPSVRRTLPGEGTAWDLLFTRCAER-TPPVIGTGGLSSTADTRRAPAQGVLTAAAGGSPGMCELSGADGGEGVGASTQQQGQPPLPLGVDFSDLLLTPEELFRPXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLLTMQTLGMFNPTLLSDLPWANYGVSGGNCDAFRDPAAGVAPAAXXXXXXXXXIGGMLHSGSWASAAPSTGLAELGQQSRGGDETASGAPPHHKNLGGVTGPRGGLSAAASAASTAMDLSADGNDLTGCQLGGAWPVQGDMLFSRIPLDAEAEIGSTNRGLGDAWGGGGDMPGGDLRNTSGHLGQSLSDFSSAPNGLG 664
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BLAST of mRNA_Ecto-sp13_S_contig6439.17201.1 vs. uniprot
Match: D8LH42_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH42_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 1.010e-65
Identity = 254/758 (33.51%), Postives = 266/758 (35.09%), Query Frame = 1 
Query:    1 VQEQAEPGGTDPPQSEGKTPVSSGGRRQQQREREGSGAALPGSATLSATDTTAPTAAAA-VDAKGRESSSVTNPWRGRRSIDFGAPCTPDPIIMPPSSTSSASGLSSTAGARRGGEGCGWSAAGAVKGECVMSPVKQEPGVEGGEIGEGGATSGFAGAGAVGDAGVTAWLGDDHASVKREQPRGRRRGDEKTRVGQPRLEDEEKEEESEKQPVPIMSSATPRAQLQPWLLERPQQWLLLQQQXXXXXXXXXXXXRQPKQPGVEEVQEGDEAEAAGGVECFGEDVSTDEAFLDWADVLAGSPDPPALNDSALPDVNIQGLDTSVGGSSAATAETAAGGLLSEPERPRSVSHSVFSIGSDGSWRPATERTGLDLGALREEAPVNGGRPRPGDGPGGRWGGSESHHHRQRLDQDTSADRGARSVSDSALCGAAPSAQRALPGEGTAWDLLFTRCAERSTPPVIGTGGLSSTADTRRAPAQGALTAAAGGSPGMCALSGADGGGGVGASTQQQGQPPLPLDVDFSDLLLTPEELFRPPXXXXXXXXXXXXXXXXXXXXXXGSGNLLTMQTLGIFNQTLLSDLPWANYGVSGGNCDAFRDPAAGAAPATXXXXXXXXXIGGMLDGGSWASATPSAGLAGLGQQSRGGDETAAGAPPHHKNPGGVTGSKGGFSAAASAASTAMDLSADGNELTGCQLGGAWPMQGGMLFSRTPLDAEAEMGSTNRGLGDAWGGGGDVPGGDLRNTSGHPSQSMSNFSSAPNGFG 2271
            +QEQAEPGGTDPPQSEGK PVSSGG RQQQRERE SGAALPGSATL              VDAKGRESSS TNPWRGRRS+DFGAPCTPDP IMPPSS SSASGLSSTAGARRGGEG G S AGA KGECVMSPVKQE GVEGG++G+                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAAPA XXXXXXXXXIGGML GGSWASATPSAGLAGLGQQS G DETA+ APPH KNPGGV+G K   SAAAS ASTAMDLSADGN+LTG QLGGAWP+QG ML SRTPLDAEAE+GSTNRGLGDAWG GG +PGGDLRNTSGH SQS+SNFSSAPNGFG
Sbjct:  352 LQEQAEPGGTDPPQSEGKAPVSSGGARQQQREREASGAALPGSATLXXXXXXXXXXXXXXVDAKGRESSSATNPWRGRRSVDFGAPCTPDPTIMPPSSRSSASGLSSTAGARRGGEGGGRSVAGAGKGECVMSPVKQELGVEGGDLGK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAPAXXXXXXXXXXIGGMLHGGSWASATPSAGLAGLGQQSGGVDETASVAPPHQKNPGGVSGPKRRLSAAASVASTAMDLSADGNDLTGGQLGGAWPVQGDMLLSRTPLDAEAEIGSTNRGLGDAWGCGGGMPGGDLRNTSGHLSQSLSNFSSAPNGFG 659
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6439.17201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBC9_9PHAE0.000e+086.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH42_ECTSI1.010e-6533.51PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6439contigEcto-sp13_S_contig6439:3269..7631 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score234.6
Seed ortholog evalue1.4e-58
Seed eggNOG ortholog2880.D8LH42
Model size4224
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.PAS domain
EggNOG OGs2CY5M@1,2S26N@2759
Cds size1998
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463889.5501697-UTR-Ecto-sp13_S_contig6439:3268..39091681463889.5501697-UTR-Ecto-sp13_S_contig6439:3268..3909Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6439 3269..3909 -
1681463889.564827-UTR-Ecto-sp13_S_contig6439:4048..53571681463889.564827-UTR-Ecto-sp13_S_contig6439:4048..5357Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6439 4049..5357 -
1681463889.5879185-UTR-Ecto-sp13_S_contig6439:7355..76311681463889.5879185-UTR-Ecto-sp13_S_contig6439:7355..7631Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6439 7356..7631 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463889.576105-CDS-Ecto-sp13_S_contig6439:5357..73551681463889.576105-CDS-Ecto-sp13_S_contig6439:5357..7355Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6439 5358..7355 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6439.17201.1prot_Ecto-sp13_S_contig6439.17201.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6439 5358..7355 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6439.17201.1

>prot_Ecto-sp13_S_contig6439.17201.1 ID=prot_Ecto-sp13_S_contig6439.17201.1|Name=mRNA_Ecto-sp13_S_contig6439.17201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=666bp
MPPSSTSSASGLSSTAGARRGGEGCGWSAAGAVKGECVMSPVKQEPGVEG
GEIGEGGATSGFAGAGAVGDAGVTAWLGDDHASVKREQPRGRRRGDEKTR
VGQPRLEDEEKEEESEKQPVPIMSSATPRAQLQPWLLERPQQWLLLQQQQ
QQQQRQLLQQQRQPKQPGVEEVQEGDEAEAAGGVECFGEDVSTDEAFLDW
ADVLAGSPDPPALNDSALPDVNIQGLDTSVGGSSAATAETAAGGLLSEPE
RPRSVSHSVFSIGSDGSWRPATERTGLDLGALREEAPVNGGRPRPGDGPG
GRWGGSESHHHRQRLDQDTSADRGARSVSDSALCGAAPSAQRALPGEGTA
WDLLFTRCAERSTPPVIGTGGLSSTADTRRAPAQGALTAAAGGSPGMCAL
SGADGGGGVGASTQQQGQPPLPLDVDFSDLLLTPEELFRPPPAPAATAAA
ATGGGGGGASNSSGSGNLLTMQTLGIFNQTLLSDLPWANYGVSGGNCDAF
RDPAAGAAPATAAATGGGGGIGGMLDGGSWASATPSAGLAGLGQQSRGGD
ETAAGAPPHHKNPGGVTGSKGGFSAAASAASTAMDLSADGNELTGCQLGG
AWPMQGGMLFSRTPLDAEAEMGSTNRGLGDAWGGGGDVPGGDLRNTSGHP
SQSMSNFSSAPNGFG*
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mRNA from alignment at Ecto-sp13_S_contig6439:3269..7631-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6439.17201.1 ID=mRNA_Ecto-sp13_S_contig6439.17201.1|Name=mRNA_Ecto-sp13_S_contig6439.17201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4363bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6439:3269..7631- (Ectocarpus species13 EcNAP12_S_4_19m)
GTTCAGGAACAAGCGGAGCCGGGAGGTACCGATCCTCCGCAGAGCGAAGG
CAAGACGCCCGTCAGTAGCGGGGGAAGGCGGCAGCAGCAGCGGGAGCGCG
AGGGAAGCGGTGCCGCACTTCCGGGGTCCGCCACCCTTTCCGCGACTGAT
ACCACCGCTCCCACAGCTGCTGCTGCTGTCGATGCAAAGGGGCGGGAGAG
TTCGTCCGTGACAAACCCATGGAGGGGGCGACGCAGTATCGATTTCGGGG
CCCCGTGCACACCGGATCCGATAATCATGCCGCCGTCGTCGACGTCCTCG
GCAAGCGGTCTGTCTAGCACTGCGGGGGCCAGAAGAGGGGGGGAAGGCTG
CGGGTGGAGCGCCGCTGGCGCGGTGAAGGGTGAATGCGTGATGTCTCCCG
TGAAGCAGGAGCCGGGAGTTGAAGGAGGGGAGATTGGTGAAGGTGGAGCG
ACCTCTGGCTTCGCAGGTGCTGGTGCGGTAGGCGATGCTGGCGTCACTGC
GTGGTTGGGAGATGACCATGCCAGCGTGAAGCGAGAGCAACCGCGGGGGA
GGAGGAGAGGGGATGAAAAGACCCGCGTAGGACAGCCCCGGCTGGAGGAC
GAGGAGAAGGAAGAGGAGTCGGAAAAGCAACCGGTGCCGATAATGTCGTC
GGCAACGCCAAGAGCACAGTTGCAGCCGTGGCTGCTTGAACGACCGCAGC
AATGGCTGCTGCTGCAGCAGCAGCAACAGCAGCAGCAGCGGCAGCTGCTG
CAGCAACAGCGACAGCCAAAGCAGCCGGGGGTGGAGGAGGTGCAAGAAGG
CGATGAGGCAGAAGCGGCGGGCGGCGTTGAATGTTTCGGCGAGGACGTGT
CTACAGATGAGGCTTTCCTGGACTGGGCAGATGTACTCGCAGGCTCCCCC
GACCCCCCAGCGCTGAACGATAGTGCCCTCCCGGACGTAAACATTCAGGG
GTTAGACACGAGTGTAGGTGGGAGCAGTGCGGCCACCGCAGAGACGGCGG
CGGGGGGGCTGCTGAGCGAGCCCGAACGCCCGCGGTCTGTGTCGCACTCT
GTGTTTAGCATCGGTTCGGACGGGTCCTGGAGGCCCGCTACCGAAAGGAC
CGGCCTTGACCTGGGAGCCCTTCGTGAGGAGGCCCCGGTCAATGGTGGCC
GACCACGACCGGGAGACGGACCAGGAGGAAGGTGGGGAGGAAGCGAGAGT
CATCACCACCGGCAACGCCTCGACCAAGACACGTCGGCGGACAGGGGGGC
AAGGTCGGTGTCCGACAGCGCACTCTGCGGCGCCGCGCCGTCCGCCCAGC
GCGCGTTGCCAGGGGAGGGCACGGCCTGGGATCTCCTCTTCACCCGTTGC
GCGGAAAGAAGCACCCCGCCGGTCATCGGCACGGGGGGATTGTCGTCGAC
CGCGGACACGCGGAGGGCGCCGGCTCAAGGCGCGCTGACTGCTGCTGCCG
GTGGTTCGCCGGGAATGTGTGCACTCTCGGGAGCGGACGGGGGGGGGGGC
GTGGGGGCGTCGACGCAGCAGCAAGGGCAGCCGCCGCTGCCTTTGGACGT
GGATTTCAGTGACTTGCTCTTGACACCGGAAGAACTGTTCCGTCCTCCTC
CCGCTCCGGCTGCAACGGCAGCGGCAGCGACCGGCGGCGGCGGCGGCGGC
GCGAGCAACAGCAGCGGTAGCGGTAACCTCTTGACGATGCAGACGCTCGG
GATCTTCAACCAGACACTGCTGAGCGATCTCCCGTGGGCCAACTACGGAG
TCAGCGGCGGCAACTGCGACGCGTTTCGCGACCCCGCTGCGGGGGCCGCT
CCTGCCACTGCTGCGGCCACCGGCGGCGGTGGCGGGATTGGTGGAATGTT
GGACGGCGGCAGCTGGGCTTCGGCAACTCCCTCCGCTGGCCTCGCGGGAC
TAGGCCAGCAATCAAGAGGGGGTGACGAGACAGCGGCTGGAGCTCCACCG
CACCACAAGAATCCAGGCGGCGTGACCGGCTCCAAGGGAGGGTTCTCGGC
AGCGGCGTCTGCCGCATCGACTGCCATGGACCTTTCGGCAGATGGGAACG
AGTTAACCGGCTGCCAGCTGGGCGGAGCGTGGCCTATGCAGGGGGGTATG
CTCTTCTCTAGGACACCGTTGGACGCGGAGGCGGAGATGGGGTCCACAAA
TAGAGGCTTGGGGGATGCGTGGGGTGGCGGTGGCGACGTGCCGGGCGGCG
ATTTGAGGAATACCTCTGGCCATCCCAGCCAGTCGATGAGCAATTTCAGC
TCTGCACCAAACGGCTTTGGCTAGGAGGCCGTCTCCAAGAGCAGGTGTAG
TGAGGACGGCAAACACAACAGGGATCACCATCAGCGGCATTCGCGGCCGT
CCGTACAACAAGCATCACCACTAGCAGAAGCAGCCTTGAGGTCTGACACG
AAGAACTTGAGGATTAGTCAAACATGTCGACGGAGGTGGCTTTCAAGAGA
GGTAGTGTCGTGTCGCGGAACCTTCCACGGCGTCCATTCGCACCCTACAC
TCCGTCGCCCGAGCGCTCGCTAGCGCGAATACGATACGGCGAAACACTAT
TTGGTCCATGTTGACACGGGTTGTGCATGTTTGTGCACGGATCTTGGTAC
CACAGACATGACTTGGGGGGAGAGGGAGAGATGTATTCAGTCCAGCTGTA
GATAGGGCAGTGGTGGTGATGTTGGGACTCTGCCGTGGGGCATGAGTACA
ACTGCGTTGGTCGGTGGAAGCAATGGTCGTCGTGTGATTTTGAACGGCAG
GCGTCCAACTGAGATTGCGTCCACTCTATTTCTTCAGGCATTTTTTAGCG
GCCCGCACGATTTGTTCGAGCCAAAGTATGCGTGCGTCTGTCTATCTTGT
GTGTGTGTTTTTTTTTCTTCTTTTCTTGCGTGACACGACACATGTACATC
GGGAGAATTTCTTGGGAGTGTCGGCAGTAGGCAGGACAGACGCTTCTCGC
AGGAGCCGGTAAGGCGCAGGCGGGTTCGGGGCTTACACCGCATTGGACGT
TACAAAACAGCACACACGTGGGATGATTGATGTTTGACAACACTCGGAGT
CCTTGCTCGTAGGAAGGTTCTTACAGTGAACCTTTTCTGGCAAATTGCAC
TCGTTCCTTCGCGTTTTATTTGGTGGAATACCTCCATCATCAATCGGGAT
AGTGAATGTTGCGAAGATGACATGTCTTGGGAAACGGTGGGCGCTGAAGT
CACTGTGAGGGAAAAGCAGGTTGCGTGGGAACGGCGCGGGTTTCCATTCA
CTGGTGTAGAGTTCAGGCAGCCGTTTCTTGACACGAGGTCATATGTTACC
CTTGATGTGCATAGGTCGAGAACGACGTGCCCATTTTTACTCATTAATCA
TGTAGTGATGATGATGATCGGCGGTGGGAGACACTCCCTTCCATGATCCT
GCACGAGGTTGCTGAGCGCAGTGCAGACCCTTCGTGCGGGTTCTCGCCCT
ATCGAACAAGTTCAACGTAGATTTTCGTTCCTCTTTGTTTGCCTTCTAGG
CATGCATTAGTAGAAGTCTGGAGGCTTTCGCCTTCTTTGTTTTCGGTGTT
TTCTTTCGCGAATGACTGTGGCTCGCTAGCTTGGCATGCAGGGTGTTGGC
TGTTGCTCGTGGTCGAGATCGACATGATGCATTTCAAGGAACGTTTGACT
GGTCATGTGCCGCATCAGTGTGTGTCTTGAGTGAAATTGGGTGCGATTTG
GCAGTGCCGCTGTTGTGTCCAGTGTGCGAGCTGCTGCTGCTGCTGTTCTC
TGTCGGATCCCGTGCTCATGACTTGCTTTATTTTCGCTCGGTTTCTGCTC
TCACCTCATCGCCAAGGAGAAGGTCGGCCGTAGGTACAAGATGATCAGTA
CTTGCGAGACAACTTTGGCGTTCGGGAGGATGTGATTCCCAATTACTTCA
TATTTTTGCATTTGTCTTGTATGCGTGTTTCATCGGTAATGATGATGATG
TAGTGACTCACGTGCGAAGCCGCCATGTCACGACACATTATCTGGACTTC
TTTAAAGTGTACCGTGTGATGTGTTGCGTGTGCCGGGTACGTGTTAATCG
CTTGTTGTACGGTTCTGAATTAGACGAAGCAAAAAATGCAGGAGTCACAA
CGCGTTTCATCACGGATGGTCTTGTGTCTCTGTATTGCCCTGTGCTCTCA
TATCACACCCTATTATACGTTCACGGCGCGAAAGGCGGCAAGGAGCGCAG
TGCTGGATTTGACAAGAGGAACGCGATACGTTTTGCTGTGGCTCTCGATC
CGGGGACACACACCATTATCAGGTTGGGAAGATGGCACTCGATTCAGAAT
GCCGTTCACACCTACCTGTGGGTCTTCGATTGTGGGAATTGATGCATGGA
AGCATGGAAGCGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6439:3269..7631-

>mRNA_Ecto-sp13_S_contig6439.17201.1 ID=mRNA_Ecto-sp13_S_contig6439.17201.1|Name=mRNA_Ecto-sp13_S_contig6439.17201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1998bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6439:3269..7631- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGCCGTCGTCGACGTCCTCGGCAAGCGGTCTGTCTAGCACTGCGGG
GGCCAGAAGAGGGGGGGAAGGCTGCGGGTGGAGCGCCGCTGGCGCGGTGA
AGGGTGAATGCGTGATGTCTCCCGTGAAGCAGGAGCCGGGAGTTGAAGGA
GGGGAGATTGGTGAAGGTGGAGCGACCTCTGGCTTCGCAGGTGCTGGTGC
GGTAGGCGATGCTGGCGTCACTGCGTGGTTGGGAGATGACCATGCCAGCG
TGAAGCGAGAGCAACCGCGGGGGAGGAGGAGAGGGGATGAAAAGACCCGC
GTAGGACAGCCCCGGCTGGAGGACGAGGAGAAGGAAGAGGAGTCGGAAAA
GCAACCGGTGCCGATAATGTCGTCGGCAACGCCAAGAGCACAGTTGCAGC
CGTGGCTGCTTGAACGACCGCAGCAATGGCTGCTGCTGCAGCAGCAGCAA
CAGCAGCAGCAGCGGCAGCTGCTGCAGCAACAGCGACAGCCAAAGCAGCC
GGGGGTGGAGGAGGTGCAAGAAGGCGATGAGGCAGAAGCGGCGGGCGGCG
TTGAATGTTTCGGCGAGGACGTGTCTACAGATGAGGCTTTCCTGGACTGG
GCAGATGTACTCGCAGGCTCCCCCGACCCCCCAGCGCTGAACGATAGTGC
CCTCCCGGACGTAAACATTCAGGGGTTAGACACGAGTGTAGGTGGGAGCA
GTGCGGCCACCGCAGAGACGGCGGCGGGGGGGCTGCTGAGCGAGCCCGAA
CGCCCGCGGTCTGTGTCGCACTCTGTGTTTAGCATCGGTTCGGACGGGTC
CTGGAGGCCCGCTACCGAAAGGACCGGCCTTGACCTGGGAGCCCTTCGTG
AGGAGGCCCCGGTCAATGGTGGCCGACCACGACCGGGAGACGGACCAGGA
GGAAGGTGGGGAGGAAGCGAGAGTCATCACCACCGGCAACGCCTCGACCA
AGACACGTCGGCGGACAGGGGGGCAAGGTCGGTGTCCGACAGCGCACTCT
GCGGCGCCGCGCCGTCCGCCCAGCGCGCGTTGCCAGGGGAGGGCACGGCC
TGGGATCTCCTCTTCACCCGTTGCGCGGAAAGAAGCACCCCGCCGGTCAT
CGGCACGGGGGGATTGTCGTCGACCGCGGACACGCGGAGGGCGCCGGCTC
AAGGCGCGCTGACTGCTGCTGCCGGTGGTTCGCCGGGAATGTGTGCACTC
TCGGGAGCGGACGGGGGGGGGGGCGTGGGGGCGTCGACGCAGCAGCAAGG
GCAGCCGCCGCTGCCTTTGGACGTGGATTTCAGTGACTTGCTCTTGACAC
CGGAAGAACTGTTCCGTCCTCCTCCCGCTCCGGCTGCAACGGCAGCGGCA
GCGACCGGCGGCGGCGGCGGCGGCGCGAGCAACAGCAGCGGTAGCGGTAA
CCTCTTGACGATGCAGACGCTCGGGATCTTCAACCAGACACTGCTGAGCG
ATCTCCCGTGGGCCAACTACGGAGTCAGCGGCGGCAACTGCGACGCGTTT
CGCGACCCCGCTGCGGGGGCCGCTCCTGCCACTGCTGCGGCCACCGGCGG
CGGTGGCGGGATTGGTGGAATGTTGGACGGCGGCAGCTGGGCTTCGGCAA
CTCCCTCCGCTGGCCTCGCGGGACTAGGCCAGCAATCAAGAGGGGGTGAC
GAGACAGCGGCTGGAGCTCCACCGCACCACAAGAATCCAGGCGGCGTGAC
CGGCTCCAAGGGAGGGTTCTCGGCAGCGGCGTCTGCCGCATCGACTGCCA
TGGACCTTTCGGCAGATGGGAACGAGTTAACCGGCTGCCAGCTGGGCGGA
GCGTGGCCTATGCAGGGGGGTATGCTCTTCTCTAGGACACCGTTGGACGC
GGAGGCGGAGATGGGGTCCACAAATAGAGGCTTGGGGGATGCGTGGGGTG
GCGGTGGCGACGTGCCGGGCGGCGATTTGAGGAATACCTCTGGCCATCCC
AGCCAGTCGATGAGCAATTTCAGCTCTGCACCAAACGGCTTTGGCTAG
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