mRNA_Ecto-sp13_S_contig6417.17180.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: D8LEU8_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU8_ECTSI) HSP 1 Score: 417 bits (1071), Expect = 1.980e-145 Identity = 203/208 (97.60%), Postives = 206/208 (99.04%), Query Frame = 1
Query: 112 MSDESSHESSSKLDGLVGTGARPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANV 735
MSDESSH+SSSKL+GLVGTG RPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLV QTSLLV+DLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANV
Sbjct: 1 MSDESSHDSSSKLNGLVGTGGRPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVPQTSLLVIDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANV 208
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A6U1N900_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N900_9STRA) HSP 1 Score: 234 bits (598), Expect = 4.470e-73 Identity = 110/233 (47.21%), Postives = 155/233 (66.52%), Query Frame = 1
Query: 178 PLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAM---DPTKG---------------LVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPDYD 822
PLQIGDE PNF+C+S +G +T+H + WG++ T+PR+ DPV TEL M+SKLS+EF+ RN +L I DSK HR +I+E QELQDC++ PI+AD +G++ GLVR D + P +G +V + + +VD D R+RMI YP G N+YE LRAIDA+Q +TF++V PANW++GEDV + ++S+ M+PKGF+++R WFR+TPQPD D
Sbjct: 55 PLQIGDEAPNFSCDSTVGLVTMHELVAGNWGLLLTFPRDFDPVGTTELAMVSKLSDEFEARNIVVLGISPDSKTQHRMWIQETQELQDCDITIPILADETGDVLLTYGLVRPDGVLAGPPGEGEDGAVEGEEEGNLQHIVDCSGVFLVDPDKRLRMIQLYPACAGRNFYEILRAIDAIQLSTFHQVSTPANWRQGEDVFIPVKITSTTANSMYPKGFLEIRNWFRLTPQPDLD 287
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A7S2W997_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W997_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.230e-66 Identity = 102/212 (48.11%), Postives = 141/212 (66.51%), Query Frame = 1
Query: 181 LQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPD 816
LQIGDEIPNF +S +G H I+ + V+ T+ + DPV TE+GMLSKL +F R+ KL+AI + SK HR +I+E+QELQDC + FPI+AD GE+ L LV+ A++ K L T + V+D+D R+R + YP T G N+YE +R++DALQ + F++V +PANW +GE+V V +SS MFPKGF +L W+R TPQPD
Sbjct: 38 LQIGDEIPNFQADSTVGMFDFHDLIDGSFAVLVTFTGDMDPVGTTEIGMLSKLMMDFRARDAKLVAISIGSKENHRKWIEEIQELQDCRVWFPIVADTDGEVSRLFNLVKPKAVNAKKNLKPATLVTVIDIDRRIRQLQFYPKTTGRNFYETIRSLDALQLSLFHQVVVPANWMQGEEVYVHPGLSSVVASSMFPKGFNELNTWYRPTPQPD 249
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: F0YNL2_AURAN (Thioredoxin domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNL2_AURAN) HSP 1 Score: 213 bits (542), Expect = 4.240e-65 Identity = 97/226 (42.92%), Postives = 145/226 (64.16%), Query Frame = 1
Query: 154 GLVGTGARPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAM-----DPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPD 816
G GT LQ+GDEIP+F+ +S +G T H ++ W V+ T+P + + VA TE+G LSKL +EF+ RN +++ + ++K HR +I V++++ C++ FP+I+DA EI + LGLV+ D LV T +++ D+D RVR+ +QYP T G N+YE LRA+D +Q + F++V PANW +GEDV +G +S FPKG V+ RPW+R TPQPD
Sbjct: 24 GGWGTRYLTLQVGDEIPDFSADSSVGKFTYHDMVDGVWSVLVTFPGDREAVATTEMGQLSKLRDEFEARNVRVMGVSCNTKYRHREWIAAVEDIEGCKVAFPLISDADAEISAKLGLVKHDWKKRNFPSAKAALVPATLVVICDIDKRVRLTMQYPTTTGRNFYEVLRAVDTVQLSLFHQVATPANWNQGEDVFIGPKLSRVAAQSAFPKGMVEQRPWYRTTPQPD 249
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A8K1C4E0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4E0_PYTOL) HSP 1 Score: 200 bits (509), Expect = 1.840e-60 Identity = 93/215 (43.26%), Postives = 140/215 (65.12%), Query Frame = 1
Query: 175 RPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGL--VLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQP 813
+ LQIG ++PN ++ +G + +H Y++ WGVI T+P+ + PV TELGML KL ++FD RNC++LA+ +DS F+++V E Q+ +L FP++AD SGE+ LGL+ A L + + +V+D+DL VR + YP TVG N YE LRA+DA Q ATFN++ P NWK EDV + +V S ++FP+GF +++P+FR+T P
Sbjct: 7 KELQIGAKLPNLIGQTQVGVVRVHDYMDGAWGVICTFPQTHHPVWMTELGMLQKLKDQFDARNCRVLALNIDSLKRQEAFLQDVNETQEVKLSFPVMADESGELSRALGLIPASAPKHAADLHRLPFSCTIVLDIDLTVRFLSYYPITVGRNLYEVLRALDAFQLATFNQIVTPTNWKISEDVFIEPDVKSDAAKKLFPQGFHEIKPYFRITASP 221
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A7S2CC88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC88_9STRA) HSP 1 Score: 199 bits (507), Expect = 4.180e-60 Identity = 92/212 (43.40%), Postives = 134/212 (63.21%), Query Frame = 1
Query: 181 LQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPD 816
LQ+GD++PNF+CE+ G +TLH I W +IFT P+N DP++ + L ++KL EEFD RN + +GVDSK+ H+ ++ + ELQ+ + FPII D +I GLVR + D LV +V+D DL+++ + YP + GHNY E LR ID+LQ + V PANW GED+ + A VS ++ + F KGF+++R WFR+T PD
Sbjct: 20 LQLGDDVPNFSCETTQGFVTLHDTIQGKWVMIFTMPKNLDPISVSALAAVAKLKEEFDARNVSVYGLGVDSKMNHKVWVSDTYELQEERVNFPIIVDDKAQISKAFGLVRPNETDFMHALVPCMLCVVIDPDLKMQYMAHYPMSTGHNYKEVLRVIDSLQLTREHPVCTPANWMVGEDIFIKAEVSLNEASERFVKGFLEIRNWFRLTAVPD 231
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A5D6Y293_9STRA (Thioredoxin domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y293_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.430e-59 Identity = 93/218 (42.66%), Postives = 135/218 (61.93%), Query Frame = 1
Query: 166 TGARPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGL--VLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQP 813
T + LQIG ++PN ++ +G + +H Y+ WGV+ T+P+ + PV TELGML KL E+FD RNC+++A+ +DS F+++V E QD +L FP++AD SGE+ LGLV A L + V+D+DL VR + YP VG N YE LRA+DA Q A N+V P NWK +DV V ++S ++FP+GF ++RP+FR+T P
Sbjct: 3 TAPKELQIGSKLPNLIGQTQVGVVRVHDYLEGAWGVLCTFPQTHHPVWATELGMLQKLKEQFDARNCRVVALNIDSLKRQEQFLRDVNETQDVKLSFPVLADESGELSRALGLVPASAPKHAADLHRLPFACTAVLDIDLTVRFLAYYPICVGRNLYEVLRALDAFQLAVLNQVVAPTNWKVNDDVFVEPELTSDAAKRLFPQGFHEIRPYFRITASP 220
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A2R5GZC7_9STRA (1-Cys peroxiredoxin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZC7_9STRA) HSP 1 Score: 197 bits (500), Expect = 3.070e-59 Identity = 85/210 (40.48%), Postives = 133/210 (63.33%), Query Frame = 1
Query: 187 IGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPD 816
+G+++P+FT ++ G I+LH Y+ W V+F +P N PV TE GM+SKL +EF+ RNCK+L + D+ H +IKE+ E Q+ E+ FP+IAD GEI LLG+ +G ++ +L ++D + ++ + YP G N+YE LR +D+LQ +++ VG PANW GEDV++ +V ++FPKGF ++P+ R+TP PD
Sbjct: 5 VGEQVPDFTAQTTKGEISLHDYVTGSWCVLFAHPANFTPVCTTEFGMVSKLQDEFEARNCKILGLSRDTVDAHEAWIKEINETQETEVNFPVIADEDGEISQLLGVAN------ARGNIVNRTLYIIDPNRDCQLSIVYPENTGRNFYEVLRTLDSLQLTSYHAVGTPANWAAGEDVVILPDVPEEKAEELFPKGFTTIKPYLRITPMPD 208
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A516GU63_9FLAO (Peroxiredoxin n=4 Tax=Formosa TaxID=225842 RepID=A0A516GU63_9FLAO) HSP 1 Score: 196 bits (498), Expect = 5.420e-59 Identity = 82/212 (38.68%), Postives = 136/212 (64.15%), Query Frame = 1
Query: 181 LQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPD 816
+++GDE PNFT +S G I H ++ WG++F++P + PV TELG ++K ++FD+RN K++A+ VD H+ ++ ++ E QD + FPIIAD ++ L ++ +A D S+ V+D D +V++I+ YP + G N+ E LR ID+LQ +++V PANWK G+D +V ++ S D+ +FPKG+ +++P+ R+TPQPD
Sbjct: 4 IRLGDEAPNFTAKSTEGEINFHEWLGHSWGILFSHPADYTPVCTTELGTVAKYKDQFDKRNVKVVALSVDGLESHKGWVNDINETQDTTVNFPIIADEDRKVSELYDMIHPNANDKLTV----RSVFVIDPDKKVKLIITYPASTGRNFEELLRVIDSLQLTAYHKVATPANWKSGDDCVVSPSIESKDIPGIFPKGYTEIKPYLRMTPQPD 211
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: K3XAE5_GLOUD (Thioredoxin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAE5_GLOUD) HSP 1 Score: 195 bits (496), Expect = 1.680e-58 Identity = 92/221 (41.63%), Postives = 140/221 (63.35%), Query Frame = 1
Query: 157 LVGTGARPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGL--VLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQP 813
+V + LQIG ++PN ++ +G + +H Y++ WGV+ T+P+ + PV TELGM+ KL ++FD RNC+LLA+ +DS F+++V E QD ++ FP++AD +GEI LGLV A L + +V+D+DL VR + YP VG N+YE LRA+DA Q A FN+V P NWK EDV V +++S ++FP+GF +++ +FR+T P
Sbjct: 1 MVPVVPKELQIGAKLPNIIGQTQVGVVGVHDYMDGAWGVLCTFPQTHHPVWMTELGMMQKLKDQFDARNCRLLALNIDSVKQQEQFLQDVNETQDVKVNFPVVADENGEISRTLGLVPASAPKHAADLHRLPFGCTIVLDVDLTVRFLSYYPICVGRNFYEVLRAVDAFQLAIFNQVVTPTNWKINEDVFVEPDITSDAAKKLFPQGFHEIKSYFRITASP 221 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6417.17180.1 >prot_Ecto-sp13_S_contig6417.17180.1 ID=prot_Ecto-sp13_S_contig6417.17180.1|Name=mRNA_Ecto-sp13_S_contig6417.17180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp MSDESSHESSSKLDGLVGTGARPLQIGDEIPNFTCESHMGSITLHSYINSback to top mRNA from alignment at Ecto-sp13_S_contig6417:4508..7401- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6417.17180.1 ID=mRNA_Ecto-sp13_S_contig6417.17180.1|Name=mRNA_Ecto-sp13_S_contig6417.17180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2894bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6417:4508..7401- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6417:4508..7401- >mRNA_Ecto-sp13_S_contig6417.17180.1 ID=mRNA_Ecto-sp13_S_contig6417.17180.1|Name=mRNA_Ecto-sp13_S_contig6417.17180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=714bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6417:4508..7401- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |