mRNA_Ecto-sp13_S_contig6417.17180.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6417.17180.1
Unique NamemRNA_Ecto-sp13_S_contig6417.17180.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: D8LEU8_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU8_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 1.980e-145
Identity = 203/208 (97.60%), Postives = 206/208 (99.04%), Query Frame = 1
Query:  112 MSDESSHESSSKLDGLVGTGARPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANV 735
            MSDESSH+SSSKL+GLVGTG RPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLV QTSLLV+DLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANV
Sbjct:    1 MSDESSHDSSSKLNGLVGTGGRPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVPQTSLLVIDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANV 208          
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A6U1N900_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N900_9STRA)

HSP 1 Score: 234 bits (598), Expect = 4.470e-73
Identity = 110/233 (47.21%), Postives = 155/233 (66.52%), Query Frame = 1
Query:  178 PLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAM---DPTKG---------------LVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPDYD 822
            PLQIGDE PNF+C+S +G +T+H  +   WG++ T+PR+ DPV  TEL M+SKLS+EF+ RN  +L I  DSK  HR +I+E QELQDC++  PI+AD +G++    GLVR D +    P +G               +V  + + +VD D R+RMI  YP   G N+YE LRAIDA+Q +TF++V  PANW++GEDV +   ++S+    M+PKGF+++R WFR+TPQPD D
Sbjct:   55 PLQIGDEAPNFSCDSTVGLVTMHELVAGNWGLLLTFPRDFDPVGTTELAMVSKLSDEFEARNIVVLGISPDSKTQHRMWIQETQELQDCDITIPILADETGDVLLTYGLVRPDGVLAGPPGEGEDGAVEGEEEGNLQHIVDCSGVFLVDPDKRLRMIQLYPACAGRNFYEILRAIDAIQLSTFHQVSTPANWRQGEDVFIPVKITSTTANSMYPKGFLEIRNWFRLTPQPDLD 287          
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A7S2W997_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W997_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.230e-66
Identity = 102/212 (48.11%), Postives = 141/212 (66.51%), Query Frame = 1
Query:  181 LQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPD 816
            LQIGDEIPNF  +S +G    H  I+  + V+ T+  + DPV  TE+GMLSKL  +F  R+ KL+AI + SK  HR +I+E+QELQDC + FPI+AD  GE+  L  LV+  A++  K L   T + V+D+D R+R +  YP T G N+YE +R++DALQ + F++V +PANW +GE+V V   +SS     MFPKGF +L  W+R TPQPD
Sbjct:   38 LQIGDEIPNFQADSTVGMFDFHDLIDGSFAVLVTFTGDMDPVGTTEIGMLSKLMMDFRARDAKLVAISIGSKENHRKWIEEIQELQDCRVWFPIVADTDGEVSRLFNLVKPKAVNAKKNLKPATLVTVIDIDRRIRQLQFYPKTTGRNFYETIRSLDALQLSLFHQVVVPANWMQGEEVYVHPGLSSVVASSMFPKGFNELNTWYRPTPQPD 249          
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: F0YNL2_AURAN (Thioredoxin domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNL2_AURAN)

HSP 1 Score: 213 bits (542), Expect = 4.240e-65
Identity = 97/226 (42.92%), Postives = 145/226 (64.16%), Query Frame = 1
Query:  154 GLVGTGARPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAM-----DPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPD 816
            G  GT    LQ+GDEIP+F+ +S +G  T H  ++  W V+ T+P + + VA TE+G LSKL +EF+ RN +++ +  ++K  HR +I  V++++ C++ FP+I+DA  EI + LGLV+ D            LV  T +++ D+D RVR+ +QYP T G N+YE LRA+D +Q + F++V  PANW +GEDV +G  +S       FPKG V+ RPW+R TPQPD
Sbjct:   24 GGWGTRYLTLQVGDEIPDFSADSSVGKFTYHDMVDGVWSVLVTFPGDREAVATTEMGQLSKLRDEFEARNVRVMGVSCNTKYRHREWIAAVEDIEGCKVAFPLISDADAEISAKLGLVKHDWKKRNFPSAKAALVPATLVVICDIDKRVRLTMQYPTTTGRNFYEVLRAVDTVQLSLFHQVATPANWNQGEDVFIGPKLSRVAAQSAFPKGMVEQRPWYRTTPQPD 249          
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A8K1C4E0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4E0_PYTOL)

HSP 1 Score: 200 bits (509), Expect = 1.840e-60
Identity = 93/215 (43.26%), Postives = 140/215 (65.12%), Query Frame = 1
Query:  175 RPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGL--VLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQP 813
            + LQIG ++PN   ++ +G + +H Y++  WGVI T+P+ + PV  TELGML KL ++FD RNC++LA+ +DS      F+++V E Q+ +L FP++AD SGE+   LGL+   A      L  +  +  +V+D+DL VR +  YP TVG N YE LRA+DA Q ATFN++  P NWK  EDV +  +V S    ++FP+GF +++P+FR+T  P
Sbjct:    7 KELQIGAKLPNLIGQTQVGVVRVHDYMDGAWGVICTFPQTHHPVWMTELGMLQKLKDQFDARNCRVLALNIDSLKRQEAFLQDVNETQEVKLSFPVMADESGELSRALGLIPASAPKHAADLHRLPFSCTIVLDIDLTVRFLSYYPITVGRNLYEVLRALDAFQLATFNQIVTPTNWKISEDVFIEPDVKSDAAKKLFPQGFHEIKPYFRITASP 221          
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A7S2CC88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC88_9STRA)

HSP 1 Score: 199 bits (507), Expect = 4.180e-60
Identity = 92/212 (43.40%), Postives = 134/212 (63.21%), Query Frame = 1
Query:  181 LQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPD 816
            LQ+GD++PNF+CE+  G +TLH  I   W +IFT P+N DP++ + L  ++KL EEFD RN  +  +GVDSK+ H+ ++ +  ELQ+  + FPII D   +I    GLVR +  D    LV     +V+D DL+++ +  YP + GHNY E LR ID+LQ    + V  PANW  GED+ + A VS ++  + F KGF+++R WFR+T  PD
Sbjct:   20 LQLGDDVPNFSCETTQGFVTLHDTIQGKWVMIFTMPKNLDPISVSALAAVAKLKEEFDARNVSVYGLGVDSKMNHKVWVSDTYELQEERVNFPIIVDDKAQISKAFGLVRPNETDFMHALVPCMLCVVIDPDLKMQYMAHYPMSTGHNYKEVLRVIDSLQLTREHPVCTPANWMVGEDIFIKAEVSLNEASERFVKGFLEIRNWFRLTAVPD 231          
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A5D6Y293_9STRA (Thioredoxin domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y293_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.430e-59
Identity = 93/218 (42.66%), Postives = 135/218 (61.93%), Query Frame = 1
Query:  166 TGARPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGL--VLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQP 813
            T  + LQIG ++PN   ++ +G + +H Y+   WGV+ T+P+ + PV  TELGML KL E+FD RNC+++A+ +DS      F+++V E QD +L FP++AD SGE+   LGLV   A      L  +      V+D+DL VR +  YP  VG N YE LRA+DA Q A  N+V  P NWK  +DV V   ++S    ++FP+GF ++RP+FR+T  P
Sbjct:    3 TAPKELQIGSKLPNLIGQTQVGVVRVHDYLEGAWGVLCTFPQTHHPVWATELGMLQKLKEQFDARNCRVVALNIDSLKRQEQFLRDVNETQDVKLSFPVLADESGELSRALGLVPASAPKHAADLHRLPFACTAVLDIDLTVRFLAYYPICVGRNLYEVLRALDAFQLAVLNQVVAPTNWKVNDDVFVEPELTSDAAKRLFPQGFHEIRPYFRITASP 220          
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A2R5GZC7_9STRA (1-Cys peroxiredoxin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZC7_9STRA)

HSP 1 Score: 197 bits (500), Expect = 3.070e-59
Identity = 85/210 (40.48%), Postives = 133/210 (63.33%), Query Frame = 1
Query:  187 IGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPD 816
            +G+++P+FT ++  G I+LH Y+   W V+F +P N  PV  TE GM+SKL +EF+ RNCK+L +  D+   H  +IKE+ E Q+ E+ FP+IAD  GEI  LLG+         +G ++  +L ++D +   ++ + YP   G N+YE LR +D+LQ  +++ VG PANW  GEDV++  +V      ++FPKGF  ++P+ R+TP PD
Sbjct:    5 VGEQVPDFTAQTTKGEISLHDYVTGSWCVLFAHPANFTPVCTTEFGMVSKLQDEFEARNCKILGLSRDTVDAHEAWIKEINETQETEVNFPVIADEDGEISQLLGVAN------ARGNIVNRTLYIIDPNRDCQLSIVYPENTGRNFYEVLRTLDSLQLTSYHAVGTPANWAAGEDVVILPDVPEEKAEELFPKGFTTIKPYLRITPMPD 208          
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: A0A516GU63_9FLAO (Peroxiredoxin n=4 Tax=Formosa TaxID=225842 RepID=A0A516GU63_9FLAO)

HSP 1 Score: 196 bits (498), Expect = 5.420e-59
Identity = 82/212 (38.68%), Postives = 136/212 (64.15%), Query Frame = 1
Query:  181 LQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPD 816
            +++GDE PNFT +S  G I  H ++   WG++F++P +  PV  TELG ++K  ++FD+RN K++A+ VD    H+ ++ ++ E QD  + FPIIAD   ++  L  ++  +A D         S+ V+D D +V++I+ YP + G N+ E LR ID+LQ   +++V  PANWK G+D +V  ++ S D+  +FPKG+ +++P+ R+TPQPD
Sbjct:    4 IRLGDEAPNFTAKSTEGEINFHEWLGHSWGILFSHPADYTPVCTTELGTVAKYKDQFDKRNVKVVALSVDGLESHKGWVNDINETQDTTVNFPIIADEDRKVSELYDMIHPNANDKLTV----RSVFVIDPDKKVKLIITYPASTGRNFEELLRVIDSLQLTAYHKVATPANWKSGDDCVVSPSIESKDIPGIFPKGYTEIKPYLRMTPQPD 211          
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Match: K3XAE5_GLOUD (Thioredoxin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAE5_GLOUD)

HSP 1 Score: 195 bits (496), Expect = 1.680e-58
Identity = 92/221 (41.63%), Postives = 140/221 (63.35%), Query Frame = 1
Query:  157 LVGTGARPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGL--VLQTSLLVVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQP 813
            +V    + LQIG ++PN   ++ +G + +H Y++  WGV+ T+P+ + PV  TELGM+ KL ++FD RNC+LLA+ +DS      F+++V E QD ++ FP++AD +GEI   LGLV   A      L  +     +V+D+DL VR +  YP  VG N+YE LRA+DA Q A FN+V  P NWK  EDV V  +++S    ++FP+GF +++ +FR+T  P
Sbjct:    1 MVPVVPKELQIGAKLPNIIGQTQVGVVGVHDYMDGAWGVLCTFPQTHHPVWMTELGMMQKLKDQFDARNCRLLALNIDSVKQQEQFLQDVNETQDVKVNFPVVADENGEISRTLGLVPASAPKHAADLHRLPFGCTIVLDVDLTVRFLSYYPICVGRNFYEVLRAVDAFQLAIFNQVVTPTNWKINEDVFVEPDITSDAAKKLFPQGFHEIKSYFRITASP 221          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6417.17180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU8_ECTSI1.980e-14597.60Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A6U1N900_9STRA4.470e-7347.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2W997_9STRA1.230e-6648.11Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0YNL2_AURAN4.240e-6542.92Thioredoxin domain-containing protein n=1 Tax=Aure... [more]
A0A8K1C4E0_PYTOL1.840e-6043.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2CC88_9STRA4.180e-6043.40Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5D6Y293_9STRA1.430e-5942.66Thioredoxin domain-containing protein n=1 Tax=Pyth... [more]
A0A2R5GZC7_9STRA3.070e-5940.481-Cys peroxiredoxin n=1 Tax=Hondaea fermentalgiana... [more]
A0A516GU63_9FLAO5.420e-5938.68Peroxiredoxin n=4 Tax=Formosa TaxID=225842 RepID=A... [more]
K3XAE5_GLOUD1.680e-5841.63Thioredoxin domain-containing protein n=1 Tax=Glob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6417contigEcto-sp13_S_contig6417:4508..7401 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score412.9
Seed ortholog evalue1e-112
Seed eggNOG ortholog2880.D8LEU8
Model size850
KEGG rclassRC00034
KEGG koko:K11188
KEGG ReactionR00602,R02596,R03919,R04007,R07443
KEGG Pathwayko00940,ko01100,ko01110,map00940,map01100,map01110
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.peroxiredoxin activity
EggNOG OGsCOG0450@1,KOG0854@2759
EC1.11.1.15,1.11.1.7
Cds size714
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6417.17180.1prot_Ecto-sp13_S_contig6417.17180.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6417 4533..7290 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463887.3212202-UTR-Ecto-sp13_S_contig6417:4507..45321681463887.3212202-UTR-Ecto-sp13_S_contig6417:4507..4532Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6417 4508..4532 -
1681463887.4187727-UTR-Ecto-sp13_S_contig6417:7290..74011681463887.4187727-UTR-Ecto-sp13_S_contig6417:7290..7401Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6417 7291..7401 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463887.3353553-CDS-Ecto-sp13_S_contig6417:4532..46251681463887.3353553-CDS-Ecto-sp13_S_contig6417:4532..4625Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6417 4533..4625 -
1681463887.345831-CDS-Ecto-sp13_S_contig6417:5016..51151681463887.345831-CDS-Ecto-sp13_S_contig6417:5016..5115Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6417 5017..5115 -
1681463887.3663642-CDS-Ecto-sp13_S_contig6417:5418..55021681463887.3663642-CDS-Ecto-sp13_S_contig6417:5418..5502Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6417 5419..5502 -
1681463887.3793898-CDS-Ecto-sp13_S_contig6417:5854..59741681463887.3793898-CDS-Ecto-sp13_S_contig6417:5854..5974Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6417 5855..5974 -
1681463887.393819-CDS-Ecto-sp13_S_contig6417:6312..64601681463887.393819-CDS-Ecto-sp13_S_contig6417:6312..6460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6417 6313..6460 -
1681463887.4050431-CDS-Ecto-sp13_S_contig6417:7120..72901681463887.4050431-CDS-Ecto-sp13_S_contig6417:7120..7290Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6417 7121..7290 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6417.17180.1

>prot_Ecto-sp13_S_contig6417.17180.1 ID=prot_Ecto-sp13_S_contig6417.17180.1|Name=mRNA_Ecto-sp13_S_contig6417.17180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp
MSDESSHESSSKLDGLVGTGARPLQIGDEIPNFTCESHMGSITLHSYINS
GWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRN
FIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVLQTSLL
VVDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGE
DVLVGANVSSSDVGQMFPKGFVQLRPWFRVTPQPDYD*
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mRNA from alignment at Ecto-sp13_S_contig6417:4508..7401-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6417.17180.1 ID=mRNA_Ecto-sp13_S_contig6417.17180.1|Name=mRNA_Ecto-sp13_S_contig6417.17180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2894bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6417:4508..7401- (Ectocarpus species13 EcNAP12_S_4_19m)
CTTTTGGCGGCTGACAGGCCCACAGGCCAGGCACAGCACCCAGCACACTG CAGTGACTACTTCTGTCGTCTGCCCTCCGAGTTCGACCTGTAGCGCTATA CTTTTTCTGCGATGTCGGATGAATCTAGCCACGAGAGTAGCAGTAAACTG GATGGGCTTGTGGGTACCGGGGCGAGGCCGCTTCAGATCGGGGACGAAAT CCCGAACTTCACGTGCGAATCTCACATGGGGAGCATAACACTTCACTCGT ACATCAACAGCGGCTGGGGGGTAATCTTCACGTGAGAGGCGTGAATCTGC GTAGCTGTCAGTTGTCACAGTTCGTTGCGATTTCGTACGTTAGACTGTAC CAGATGCGACAATATAATGTAGTTGCTGAACCCTCGCCAGTGTATCGTCA TATGTATGTTTTTGCGTAACACGTTGGATATCATACACAGCAGTGCTGTG CTCTACGACGTACATGTTCGCCCTACATCAGACCATTGGTGACACCACCA AAGCCGTAGCATAGTCTCGAGGGGAAAACTCGAACAAGTCGGCTTAAGAA TTTGCTGTTTCGGAGAAACGCGCCCCTTGCGCTAAAAAGGCTCGTGCCTG TATAGATGTTGGTGCGCATCTGCTTGTGCCACTTTGCCAGACATTCGCGT GGGTGTGTCCTGCCGACAGGACGCAGATGTTACGGCTCGACCCTAGGGGG GACAACCGCTGTAGGACAACACACTTCCACATTAAACACCACGCCGCGCA CGAGAGCAGTACCTTCCGTTTTTGTCTATTGGCGGCTGGGCCTACTGTAC AACTACAAGATTTTCTCGCACTATTTGCAAGCTGTTGTCCACTCCGTGTA CAAGATGTTTTGATTATGGTACATTTGCGGCACTCCCGGTACTAAGGGGT TACTGCCGATCCACCCACAACCACCCTCTGTACCATTAAAGATATCCGCG AAACAACGACCCTGTAGCTTGCACGGAGCTTGGAATGCTGAGCAAACTGT CGGAGGAGTTCGACGAGAGGAACTGCAAGCTGCTTGCCATCGGAGTGGAC TCAAAAATAGGACATCGGAACTTCATCAAGGAGGTGCAGGTACTGACAAG AAGACCACATGAATGGTTCAAATGACATGACCGGATCACAAATCTTACAA TATACGAGCGCACACGGCACCACGAATCAGAAAATCCCTTACCGTAGGCC TGGTGCTAGCGATCTGTGGACGAGATGGGAGCTGACAATCCCGGCGTGAG ACCGCGAACGCACTTTTGAATTGGATCGCGACAACGAGTGAGAACGAACC ATCAGCATGCACGCCGCCAGTGCAGGGCGACGATAACAAGACTAGATCCT CCCCGCCCAGCGCCAAATGATCAAAGGCGACACGTCGTGATTCTTGAACC CCGCCTGCACTTGCCCGACCTGCTCAGGAACTCCAGGACTGCGAGTTGAA GTTCCCCATCATAGCCGATGCCAGCGGCGAGATATTTTCGCTCCTGGGCT TGGTACGGGAGGATGCAATGGACCCGACCAAAGGACTTGTGCTTCAGGTG CTGTGTGTGGTGGTGTATACCGCACTTATGGGTGTGGGTATATGTTTGCC GCAGATTTGACGAGAAGTCCAAGTCCAACCCGTGCGCTTACCTGGAGACA AATCGTACCACACGTTTGGCGTGCCAACCAGCCCTGGTAAGCACGCAAAG ACGTCGACACCAGAAGTGCCTGGAGTGCTGTGCACGACTTCTTAGACAAC GACAACTTATCTTGTTGATTGCCAGCCAGACGAACGGATGCTGCAGTTAA TTCAATTTCCCGTCAAGTTTTCACACGCCCCCCCTTCGTGTGTCCTCCTG CCCACAAGTTGGCCAACCACGCAGCGCAATCATGACTCTTGCTGAACAGA CGTCTTTGCTGGTGGTCGACTTGGACTTGCGTGTGAGGATGATAGTCCAG TACCCGTGTACTGTTGGGCACAACTACTACGAGGTGGGACGATCTGCGTG ATACGAAATACATTGCAACCATCCCTTACATCACGACGGCCACAGACGTT TTTGTATGAGTGTATGCATAGAGAACCATCAAACCAATCGAGCCGGGGCA ACTAACCGAAACCGTCAACTATCATCGTGGTGTATCACCAGCGTACACCG AGCCTGCCCATCTTGGACGATACATCCCGAGTCTACTATGGCAAGCCGTG GACGAGTCCCACCCCCGCTCTCCCCTGTGCATGCGTATGACGTGCGTTTT AATTATTTGTCTGTTCTCCCGGGTGGCACAACGTAGGCTCTGAGGGCGAT TGATGCGCTGCAACAGGCAACGTTCAACCGGGTCGGGATACCGGCCAACT GGAAAGAAGGCGAGGATGTGCTTGTAGGGGCAAACGTAAGTCTCCTCTCC CCCCACGTTCCCTACCCATGAGACTTTTCAAATTTGTGTGTTTGTGTGTA TGCCTCGAACAAGCCGTTTCTGAATGTATGTGTAGGTCATTGACTTCTAC CCTGGCATACCCAGAGGTCTGTGGCAACACGTTTTTGCCAATGGAACATC AACTCGGCCAAACCCCGTCCGTTTTTCGCCGAGTTGGGAACCAAAAAATC TTTTGTCACTGAGACAAGTTGGAAATCTGGCCGGAAATAGTTCCAGCTAT TGTAATGGTTGACACATGGTCCCGGGACAAGGACAAAAAAACTGTCAAAT TCATTGGCACCCATACCAGTAAGACGTGTCGACGGTCTGTATTGAGTCTC AAATCACGTACTGCCCGCTATCCCAGGTGTCGTCGTCGGACGTTGGGCAA ATGTTTCCCAAGGGTTTCGTCCAGCTACGACCATGGTTCAGGGTGACCCC TCAGCCAGACTACGACTGACAGTTCCACGAGGACGGAGAGGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6417:4508..7401-

>mRNA_Ecto-sp13_S_contig6417.17180.1 ID=mRNA_Ecto-sp13_S_contig6417.17180.1|Name=mRNA_Ecto-sp13_S_contig6417.17180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=714bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6417:4508..7401- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGGATGAATCTAGCCACGAGAGTAGCAGTAAACTGGATGGGCTTGT
GGGTACCGGGGCGAGGCCGCTTCAGATCGGGGACGAAATCCCGAACTTCA
CGTGCGAATCTCACATGGGGAGCATAACACTTCACTCGTACATCAACAGC
GGCTGGGGGGTAATCTTCACATATCCGCGAAACAACGACCCTGTAGCTTG
CACGGAGCTTGGAATGCTGAGCAAACTGTCGGAGGAGTTCGACGAGAGGA
ACTGCAAGCTGCTTGCCATCGGAGTGGACTCAAAAATAGGACATCGGAAC
TTCATCAAGGAGGTGCAGGAACTCCAGGACTGCGAGTTGAAGTTCCCCAT
CATAGCCGATGCCAGCGGCGAGATATTTTCGCTCCTGGGCTTGGTACGGG
AGGATGCAATGGACCCGACCAAAGGACTTGTGCTTCAGACGTCTTTGCTG
GTGGTCGACTTGGACTTGCGTGTGAGGATGATAGTCCAGTACCCGTGTAC
TGTTGGGCACAACTACTACGAGGCTCTGAGGGCGATTGATGCGCTGCAAC
AGGCAACGTTCAACCGGGTCGGGATACCGGCCAACTGGAAAGAAGGCGAG
GATGTGCTTGTAGGGGCAAACGTGTCGTCGTCGGACGTTGGGCAAATGTT
TCCCAAGGGTTTCGTCCAGCTACGACCATGGTTCAGGGTGACCCCTCAGC
CAGACTACGACTGA
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