mRNA_Ecto-sp13_S_contig6381.17143.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6381.17143.1
Unique NamemRNA_Ecto-sp13_S_contig6381.17143.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A6H5JK21_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK21_9PHAE)

HSP 1 Score: 827 bits (2136), Expect = 6.680e-291
Identity = 541/853 (63.42%), Postives = 552/853 (64.71%), Query Frame = 1 
Query:   61 MMGGEIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSVSSVLDRRQSVSSSGGDEDEPHPVTRARGISGESRGPAXXXXXXXXXXXXXXXXXXXXXXXGGLDQGRCRGYSRGDATETGKEEGRGAPDGGGDGRTSSPTSVAEFALSAAGLGCNGFPAQSQPQXXXXXXXXXXXXXXXXXXXDDVAGSRDGAYGGTSGSXNQRLARXXXXAAGGRAGDCGDGSAKEEMGGGPAAGEGCGAGEGARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETPSPSASPELQPTTGAAAVAAGAAG--------------------------GEGLVLEGDGRRVSSPGGDDERAGGDGHGSRHHYGSRAGKAAVEFSGGGVCAATGPLTAEEDAAA--VAPARAGFATXXXXXXXVAPQRTVRPPARPFVGPSLANGDGGGRGRGLRGNREGGEQDGGRCSFYR---------------PWSGSGGDVGAVIGVRRGASSTAAPVSPATPAGRSVFGDVGGARSAVPAAGSAMAAPRTAPKPRKPRFRIPVVTPSPSSTANASSQPRRAPLAVHDATPPTPRSSGPNTTATPFSIGVASAAAAPQHVAVTPGTPSARRSPVELFTPSPMTSAAXXXXXXXXXXXXVTGSGAGASPTPPAD-FDGRRCRSPKRTGPPPEAKAGRNGGSRAASSKRKQGEEGRKVVEAQKRPRASAV 2487
            MMGG+IDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSV+SVLDRRQSVSSSGGDEDEPHP TR RGISG SRGP       XXXXX            GG +QGRCRGYSR DA  TG                                                                                                                          EGARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETPSPSASPELQP TG AA                                 GEGLVLEGDGRR SSPG                                                  VAPARAGFA         AP+RTV+PPARPF GP LANGDGGGR RGL GNREGGEQDGGRC  YR               PWSG+GG VGAVIGVRRGASST  PVSPATPA RSVFGDVGG R AVPA G+AM APRTAPKPRKPRFRIPVVTPSPSST NA+SQPRRAPLAVH ATPPTPRSSGPNTTATP SIGVASAAAAPQ VAVTPGTPSAR SPVELFTPSP+ S+ XXXXXXXXXXXX                FDGRRCRSPK T  PP+AKAGRNGGSRAASSKRKQ EEGRKV  AQKRPRASAV
Sbjct:    1 MMGGDIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSVNSVLDRRQSVSSSGGDEDEPHPATRPRGISGGSRGPTAAAAGGXXXXXVGMTVETGGDDSGGRNQGRCRGYSRRDAAGTG--------------------------------------------------------------------------------------------------------------------------EGARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETPSPSASPELQPATGPAAXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXGWVGEGLVLEGDGRRDSSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPARAGFAAA------AAPERTVQPPARPFAGPCLANGDGGGRERGLTGNREGGEQDGGRCGSYRAPPAPVNVVDFLPSRPWSGNGGSVGAVIGVRRGASSTPVPVSPATPACRSVFGDVGGGRPAVPATGTAMTAPRTAPKPRKPRFRIPVVTPSPSSTPNANSQPRRAPLAVHHATPPTPRSSGPNTTATPDSIGVASAAAAPQQVAVTPGTPSARWSPVELFTPSPVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDGRRCRSPKCTSIPPDAKAGRNGGSRAASSKRKQEEEGRKVEGAQKRPRASAV 725
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BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A835YSF8_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF8_9STRA)

HSP 1 Score: 181 bits (460), Expect = 4.720e-49
Identity = 88/116 (75.86%), Postives = 97/116 (83.62%), Query Frame = 1 
Query:  118 KRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSV 465
            KR VRKWS +ED  M  LV E G +QWGLIGS LS     RTGKQCRERWHNQLDP IKKD WT+ EE+ LM+AHS+HGN+WAEIAK+LPGRTDNAIKNHWNSAKRRLSRQLNMS+
Sbjct:   28 KRVVRKWSPEEDQLMALLVKEHGTRQWGLIGSLLSG----RTGKQCRERWHNQLDPHIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLSRQLNMSM 139
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BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A835YW24_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW24_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.490e-46
Identity = 82/109 (75.23%), Postives = 91/109 (83.49%), Query Frame = 1 
Query:  118 KRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLS 444
            KR VRKWS +ED  M+ LV E G +QWGLIGS LS     RTGKQCRERWHNQLDP IKKD WT+ EE+ LM+AHS+HGN+WAEIAK+LPGRTDNAIKNHWNSAKRRLS
Sbjct:    3 KRSVRKWSPEEDQLMMLLVREHGTRQWGLIGSLLSG----RTGKQCRERWHNQLDPMIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLS 107
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BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A7S2CJK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJK5_9STRA)

HSP 1 Score: 171 bits (432), Expect = 6.090e-44
Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 1 
Query:   64 MGGEIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQL 453
            + G    S I +  + K +R VRKW+ +ED+ M+ LV E G K WG IGS L      RTGKQCRERWHNQLDPAI+KDPWT  EE+ L++AHS++GN+WAEIAK+LPGRTDNA+KNHWNSAKRRLSRQ+
Sbjct:   28 LAGNARRSPIADFAE-KPRRVVRKWTPEEDSLMMTLVQEHGTKHWGRIGSSLQG----RTGKQCRERWHNQLDPAIRKDPWTGGEEEILLKAHSLYGNRWAEIAKLLPGRTDNAVKNHWNSAKRRLSRQV 152
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BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: I2CQ47_NANGC (Myb transcription factor (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ47_NANGC)

HSP 1 Score: 155 bits (393), Expect = 1.810e-40
Identity = 73/109 (66.97%), Postives = 88/109 (80.73%), Query Frame = 1 
Query:  118 KRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLS 444
            K+ VRKWS +EDAEMV+LV ELG KQWG IG +L    G R+GKQCRERWHNQLDP IKK+ W+  EE  L + H+ +GN+WAEIA+ LPGRTDNAIKNHWN+A+RR+S
Sbjct:   20 KKMVRKWSAEEDAEMVRLVKELGTKQWGQIGIQL----GGRSGKQCRERWHNQLDPNIKKEAWSAEEEMVLQQKHAEYGNRWAEIARFLPGRTDNAIKNHWNNARRRMS 124
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BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A7S0SQE8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQE8_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.010e-38
Identity = 80/124 (64.52%), Postives = 94/124 (75.81%), Query Frame = 1 
Query:   79 DHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQ 450
            DH D+ N     +KR VRKW+++ED  M+ LV E G + WGLIG++L+     RTGKQCRERWHNQLDPAI K PWT+ EE  L+ AH+  GN+WAEIAK LPGRTDNAIKNHWNSAKRRL RQ
Sbjct:    7 DH-DLSNG----QKRTVRKWTQEEDNLMMALVSEHGTRHWGLIGAKLNG----RTGKQCRERWHNQLDPAINKTPWTEHEESLLLAAHNDLGNRWAEIAKRLPGRTDNAIKNHWNSAKRRLLRQ 121
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BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A8K1FIZ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIZ4_PYTOL)

HSP 1 Score: 154 bits (390), Expect = 8.040e-38
Identity = 79/154 (51.30%), Postives = 105/154 (68.18%), Query Frame = 1 
Query:   79 DHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQ---LNMSVSSVLDRRQ---SVSSSGGDEDE 522
            D      +   K ++ V KW+++ED  M+KLV + G + W +IG++L      R GKQCRERWHNQLDPAI+KDPWT  EE  L  +H ++GNKWAEIAK+LPGRTDNAIKNHWNS+KRRL R    ++ S+S    R++   S++S+G   DE
Sbjct:   16 DEDHYRGSKKRKERKPVCKWTEKEDQMMIKLVQKYGTRHWTIIGTKLPG----RNGKQCRERWHNQLDPAIRKDPWTDEEERILRESHELYGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRSSSTVSGSLSLTRPRKRRCSSITSNGSSSDE 165
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BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A7R9U0E6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0E6_9STRA)

HSP 1 Score: 160 bits (405), Expect = 2.780e-37
Identity = 76/118 (64.41%), Postives = 91/118 (77.12%), Query Frame = 1 
Query:  100 ALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQL 453
            +   ++KR VRKW+ +ED  M+ LV   G K+WGLIG RL      RTGKQCRERWHNQLDP+I+KDPW+K EE  L+  H   GN+WAEIAK+LPGRTDNAIKNHWNSAKRRL+RQ+
Sbjct:   14 SASGRKKRQVRKWTPEEDKLMMDLVNTFGTKRWGLIGGRLQG----RTGKQCRERWHNQLDPSIRKDPWSKQEEAILIVVHQQVGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLTRQM 127
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BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: W7T3Y1_9STRA (Myb transcription factor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3Y1_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.830e-37
Identity = 72/106 (67.92%), Postives = 86/106 (81.13%), Query Frame = 1 
Query:  127 VRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLS 444
            VRKWS +EDAEMV+LV ELG KQWG IG +L    G R+GKQCRERWHNQLDP IKK+ W+  EE  L + H+ +GN+WAEIA+ LPGRTDNAIKNHWN+A+RR+S
Sbjct:    2 VRKWSAEEDAEMVRLVKELGTKQWGQIGIQL----GGRSGKQCRERWHNQLDPNIKKEAWSAEEEMVLQQKHAEYGNRWAEIARFLPGRTDNAIKNHWNNARRRMS 103
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BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A0P1AEH6_PLAHL (Myb-like dna-binding n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEH6_PLAHL)

HSP 1 Score: 150 bits (380), Expect = 6.750e-37
Identity = 73/125 (58.40%), Postives = 91/125 (72.80%), Query Frame = 1 
Query:   73 EIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSR 447
            E+    + N+   +RK  V KW+++ED  M+KLV + G + W +IG++L      R GKQCRERWHNQLDPAI+K+PWT  EE TL + H   GNKWAEIAK+LPGRTDNAIKNHWNS+KRRL R
Sbjct:   11 ELTQQHLENSTRKERKP-VCKWTEKEDLLMIKLVQKYGTRHWTVIGTKLPG----RNGKQCRERWHNQLDPAIRKEPWTPDEERTLKKLHDTFGNKWAEIAKLLPGRTDNAIKNHWNSSKRRLKR 130
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK21_9PHAE6.680e-29163.42MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835YSF8_9STRA4.720e-4975.86Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A835YW24_9STRA1.490e-4675.23Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S2CJK5_9STRA6.090e-4463.08Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
I2CQ47_NANGC1.810e-4066.97Myb transcription factor (Fragment) n=1 Tax=Nannoc... [more]
A0A7S0SQE8_9STRA1.010e-3864.52Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A8K1FIZ4_PYTOL8.040e-3851.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7R9U0E6_9STRA2.780e-3764.41Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7T3Y1_9STRA5.830e-3767.92Myb transcription factor n=1 Tax=Nannochloropsis g... [more]
A0A0P1AEH6_PLAHL6.750e-3758.40Myb-like dna-binding n=1 Tax=Plasmopara halstedii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6381contigEcto-sp13_S_contig6381:2178..7453 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score797.7
Seed ortholog evalue5e-228
Seed eggNOG ortholog2880.D8LCT4
Model size2492
KEGG koko:K09420
KEGG Pathwayko04151,ko05166,map04151,map05166
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.RNA polymerase II transcription regulator recruiting activity
EggNOG OGsCOG5147@1,KOG0048@2759
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-07_006800.1
Cds size2490
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463883.5361-CDS-Ecto-sp13_S_contig6381:2177..35171681463883.5361-CDS-Ecto-sp13_S_contig6381:2177..3517Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6381 2178..3517 -
1681463883.547226-CDS-Ecto-sp13_S_contig6381:3905..46181681463883.547226-CDS-Ecto-sp13_S_contig6381:3905..4618Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6381 3906..4618 -
1681463883.556477-CDS-Ecto-sp13_S_contig6381:5039..52131681463883.556477-CDS-Ecto-sp13_S_contig6381:5039..5213Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6381 5040..5213 -
1681463883.5656383-CDS-Ecto-sp13_S_contig6381:7190..74531681463883.5656383-CDS-Ecto-sp13_S_contig6381:7190..7453Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6381 7191..7453 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6381.17143.1prot_Ecto-sp13_S_contig6381.17143.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6381 2178..7453 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6381.17143.1

>prot_Ecto-sp13_S_contig6381.17143.1 ID=prot_Ecto-sp13_S_contig6381.17143.1|Name=mRNA_Ecto-sp13_S_contig6381.17143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=830bp
LGVDSSRYRPYHQPERVAGGMMGGEIDHSDILNALDAKRKRCVRKWSKQE
DAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKD
PWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQ
LNMSVSSVLDRRQSVSSSGGDEDEPHPVTRARGISGESRGPAAAAAGGGT
GVGVGMTVETDGDGSGGLDQGRCRGYSRGDATETGKEEGRGAPDGGGDGR
TSSPTSVAEFALSAAGLGCNGFPAQSQPQQQQQQQQRGHQRHRRHEPDDD
VAGSRDGAYGGTSGSSNQRLARPPPTAAGGRAGDCGDGSAKEEMGGGPAA
GEGCGAGEGARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLS
AARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETPSPSASPELQP
TTGAAAVAAGAAGGEGLVLEGDGRRVSSPGGDDERAGGDGHGSRHHYGSR
AGKAAVEFSGGGVCAATGPLTAEEDAAAVAPARAGFATAAAAAAAVAPQR
TVRPPARPFVGPSLANGDGGGRGRGLRGNREGGEQDGGRCSFYRPWSGSG
GDVGAVIGVRRGASSTAAPVSPATPAGRSVFGDVGGARSAVPAAGSAMAA
PRTAPKPRKPRFRIPVVTPSPSSTANASSQPRRAPLAVHDATPPTPRSSG
PNTTATPFSIGVASAAAAPQHVAVTPGTPSARRSPVELFTPSPMTSAAAA
AAAAGGGGRRVTGSGAGASPTPPADFDGRRCRSPKRTGPPPEAKAGRNGG
SRAASSKRKQGEEGRKVVEAQKRPRASAV*
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mRNA from alignment at Ecto-sp13_S_contig6381:2178..7453-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6381.17143.1 ID=mRNA_Ecto-sp13_S_contig6381.17143.1|Name=mRNA_Ecto-sp13_S_contig6381.17143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5276bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6381:2178..7453- (Ectocarpus species13 EcNAP12_S_4_19m)
TTAGGGGTAGACAGCAGTAGATACCGTCCGTATCATCAGCCTGAGCGGGT
AGCAGGAGGCATGATGGGTGGGGAAATAGATCACAGCGATATCCTGAACG
CCCTCGACGCCAAGCGGAAGAGGTGCGTGAGGAAGTGGAGCAAGCAGGAG
GACGCCGAGATGGTCAAGCTTGTGCTGGAGTTGGGAGTCAAGCAGTGGGG
CCTGATCGGCTCCAGGCTGTCATCGTTGGGGGGGGACCGCACCGGCAAGC
AGTGTCGCGAGAGGTGGGTCGATCAATGCCGGGCGCCTCCGCAGCCTCGA
AACGGGCACTTGTGACGTAGGAGATCCAGTGGTGCGTTCGCGTGTCTAAC
CTTTTGGCGTACCCCCTGCTGCTGCAATCTGCTGCTGGTAAAGAAGTCGA
GAAAGAGAGTAACGGAAAACATTTACCACCCCCGGCTTGGAGCCTGTAGG
ACCTTCACCACCCCAACGAGGACAAGCCAGGGAATGCTATAGAGAGATCG
CCCTCTCTGGGGGATCTATACGCGTGCACGCCCTCAGTTGCGCAGGTCCC
GTTCCCCCGTCCCTGCGTTATTTTGCTCGGCTCGGTGGTTTGAGGTTTTT
TCTCCCCAACGGCAGCAGCAGCAGTTGGGGACGAAACGGGCGAGAGCCGA
ATTTTCTCATTGCAGCGGCTCCCCTCTTGGACGCATGCACCACAGGATCC
CAACCTGTTTTGTAGGCAAAACACATTCCCCGTTGTGGGCACGTTCGATG
AACACCCGCGCTGTAGGCTCTTCTCAGCCTGGCATTGTAGTCATGTTGGC
CAACAAGCTCGATCGATCTTACCAACAACAGCTCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTTA
ATGTGTGACGCCGGAAATTCGAACGAAACACACAGAAAGTTTCGGTCCGG
AAAAAGAAGCCACCGCCAACCCACCAAGGACGGCGATCCAAGACGCGCAG
CCCCAAACAGGAAGATCAGGGCAAACTAAAACTGGCGCGCTGGGAGGGAT
ACTGAGCCCTTGAGATGAGAGGACCTTCGGTTGCCATTCCCCGCACTGGA
GGGCAGAAACTGGCTTTTTTTATCCCCGATTGTTCCTACCTGCTAGTATT
GCATTGAGCTCTCACTAATTCCTTTATGTATGCATATGTATTGAGACGAT
TGTCTCCCGCTTGGCTGATGTTTCTGATGGGATGAGTGCTTTCGAGGACA
CAAGCGGTCCAGCCTCTCGTGAGAGACGAAGAACGCACGTACGAAGAGGC
TAAGAGAGGGGGCAGCTGGCCCGCTCTAGATACTTGTCCGTGGCACACAG
CCCGAAGGCAGATCTCCGACAGGTCGTCTTCTCACGTCACCATCTACGAG
GCGTTGTGAGGTGACGCTCACATGAGTATGCGGCAAACTGGATGGAGATC
ACGAAACATAGGAGGATTGTCGCCCACGGCCCCTCTTTCGCCAATCCCTA
TGGAGCTTTCGGAAAGAATCCCCCTCTCCGGCTGGTGCAGATATCAGATG
AGACGAATATCTAAATGTTAAGCGATCCACCCCGGGAAATATTCGTACGA
AAACCTTCAAACCGCTCCTCTTGCTGTATCTTTTTGCCAGGTGGCACAAT
CAGTTGGACCCCGCCATCAAGAAGGATCCCTGGACGAAGGCGGAGGAAGA
CACCCTTATGCGCGCCCACAGCATACACGGGAACAAGTGGGCCGAGATCG
CCAAGATACTCCCCGGCAGGACGGATAACGCCATCAAGAATCACTGGAAC
TCCGCCAAGCGCCGGTAATTCTGAAACCGCCTTCTCGAGGAAGAATATTT
TGTTGTCTAGAAAATAGAGAGGGGGGTTCGTAACCGTTAACCCCTACTTT
CACCAAGATTAGTGTCCTCGCGAAGACTACTAATTAATTACCCCCAGCCC
AAGAATTCAGTCGGGTTGTGTGATACGGCTGGCCACGAGGACGACGTCCC
GTTTGTATGTTTGCATGCAGTGGGGATTACAACTCCGGCAAGATTCCAGT
GCTCCCCTTTGTGCGGTGGCCATTGCCGTTTCCTCCGTCCGTCAAAGAGT
GATCCGTTTTGGCTCAAGGCCTACATCCCCCCCCCCCCCCAACCAGTTCT
CCGTCCTCTCGAGGACGCGCGGTCATTGGCCCAATCGCTAATACACGAGT
TCCCCTTCCCTTCCCCGCCGCCTCTGCGCTTCCAGCCTCTCTCGCCAGCT
GAACATGAGCGTCAGCAGCGTGTTGGATCGACGACAGTCAGTGTCTTCGT
CGGGCGGGGATGAGGACGAACCTCATCCGGTAACGCGTGCGAGAGGGATC
AGCGGAGAGAGTCGAGGCCCAGCCGCAGCAGCAGCAGGAGGTGGTACCGG
CGTCGGAGTAGGCATGACGGTAGAAACTGATGGTGATGGCAGCGGCGGTC
TAGATCAGGGTCGTTGTCGGGGGTACAGCAGGGGAGACGCGACTGAGACG
GGTAAAGAGGAGGGGAGGGGAGCCCCGGACGGAGGCGGTGACGGCCGAAC
CTCGTCACCAACCTCGGTGGCTGAGTTTGCTCTGTCGGCGGCTGGGCTGG
GGTGTAACGGCTTTCCGGCTCAATCGCAACCGCAGCAGCAGCAGCAGCAG
CAGCAGCGGGGGCATCAACGGCACCGGCGACACGAGCCAGATGATGACGT
TGCGGGTTCTAGGGACGGCGCTTACGGTGGCACCAGCGGCAGCAGCAACC
AACGGCTAGCGCGACCACCACCCACCGCTGCGGGAGGCCGTGCCGGCGAC
TGCGGTGATGGCTCCGCGAAGGAGGAGATGGGGGGAGGACCGGCCGCGGG
TGAAGGCTGTGGGGCAGGCGAGGGCGCTCGGACCTCGGCGGACATGATGT
CGGCCCAGGCGCTGTTTGGGAAGAGCATCCCGGGTCTGACGTCCTTCGGT
AAGGTTAAGGCGTGTGTTGCCCCCCCCCCCATCTTTTGTGTCCTCGCCGT
CTAGTCGCTTGTGCGTCCGGGTTTGTTTACTGGTAGTGGCTACGCTGCGT
TTTTTTTTTCCATCAACGCGACGAACTCCCCCCCGTCTTTCTCTGTATCG
CTTGAGAGATACGGTAAACCGCTGTACCCTCATCTTGTGTTGCCGCATGA
TGTTTGGACGGCCTATTTTGAGGGGCTGCAACCGTGCACGCACACCGCCC
TAAAACTTCAATCGGTACCCTCCAACCGTTTCCCTCCAACCGTTCCCCTC
CAATCGGTATCCTCATTTTTTGTTGCCGTCTCATGCCTGAACCGCCTTCT
TCGTCGTGACTGAAACCGCGAACCCCACGCGCGCAGACCGAGCCGAGATG
CACAGCTTCCAGCAGGAGAAGGCCCAGCTCCTCTCCGCCGCCCGCGCGAA
CGGGGACACGGAGAAGCGCAAGATGCTGGAAGAGACCACTCCTGATGTCC
TCAACGCCAAGGGGCTCTTGATGTTCCTGCGGCAATCGCCCTCCTCGGAG
ACGCCCTCTCCGTCCGCTAGCCCGGAGCTTCAGCCTACCACGGGAGCGGC
GGCAGTGGCGGCGGGGGCGGCGGGGGGGGAGGGGCTGGTGCTCGAAGGCG
ACGGTAGGAGGGTCTCGAGCCCGGGAGGGGATGATGAGAGGGCGGGCGGC
GACGGTCATGGTAGTAGACACCACTACGGCAGCAGGGCGGGTAAGGCCGC
GGTGGAGTTCTCCGGGGGAGGCGTGTGCGCGGCGACGGGGCCGTTAACGG
CGGAGGAGGACGCGGCGGCAGTGGCCCCAGCGCGGGCGGGTTTTGCGACG
GCGGCGGCGGCGGCGGCGGCGGTGGCACCACAAAGAACAGTGCGGCCACC
CGCGCGACCCTTCGTGGGGCCGAGCCTAGCGAACGGAGACGGCGGTGGCA
GGGGGCGGGGTCTCAGAGGTAACCGTGAGGGCGGAGAGCAAGACGGCGGG
CGCTGCAGTTTCTACCGGCCGTGGAGTGGTAGTGGTGGAGATGTTGGTGC
TGTCATCGGCGTGCGCCGGGGTGCTAGCTCGACTGCCGCGCCAGTGTCGC
CGGCCACACCCGCCGGTCGTTCTGTGTTTGGCGATGTCGGAGGCGCCCGT
TCCGCGGTGCCCGCTGCCGGTTCGGCGATGGCTGCCCCAAGAACCGCGCC
GAAGCCTAGGAAGCCGCGGTTCAGGATCCCTGTGGTGACGCCGAGCCCGT
CTTCGACGGCCAACGCTAGCAGCCAGCCCCGCCGGGCTCCCCTCGCCGTT
CATGATGCAACGCCGCCGACTCCGAGGTCATCGGGCCCTAACACAACGGC
GACGCCTTTTTCGATCGGCGTCGCTTCGGCGGCGGCGGCGCCGCAGCATG
TAGCCGTGACTCCGGGGACACCGTCGGCGAGGCGGTCGCCGGTGGAGCTA
TTCACGCCGTCGCCGATGACGTCGGCGGCGGCGGCGGCGGCAGCGGCGGG
TGGTGGCGGGCGGCGCGTCACCGGTAGTGGCGCTGGTGCTTCTCCTACCC
CTCCCGCAGATTTCGACGGCCGCCGGTGTAGATCGCCGAAACGCACGGGT
CCCCCCCCCGAGGCGAAGGCAGGGCGAAACGGCGGCAGTCGCGCTGCGTC
GTCGAAGCGCAAGCAGGGAGAGGAGGGGAGGAAGGTAGTAGAGGCGCAGA
AGCGGCCGAGAGCTTCAGCTGTTTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6381:2178..7453-

>mRNA_Ecto-sp13_S_contig6381.17143.1 ID=mRNA_Ecto-sp13_S_contig6381.17143.1|Name=mRNA_Ecto-sp13_S_contig6381.17143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2490bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6381:2178..7453- (Ectocarpus species13 EcNAP12_S_4_19m)
TTAGGGGTAGACAGCAGTAGATACCGTCCGTATCATCAGCCTGAGCGGGT
AGCAGGAGGCATGATGGGTGGGGAAATAGATCACAGCGATATCCTGAACG
CCCTCGACGCCAAGCGGAAGAGGTGCGTGAGGAAGTGGAGCAAGCAGGAG
GACGCCGAGATGGTCAAGCTTGTGCTGGAGTTGGGAGTCAAGCAGTGGGG
CCTGATCGGCTCCAGGCTGTCATCGTTGGGGGGGGACCGCACCGGCAAGC
AGTGTCGCGAGAGGTGGCACAATCAGTTGGACCCCGCCATCAAGAAGGAT
CCCTGGACGAAGGCGGAGGAAGACACCCTTATGCGCGCCCACAGCATACA
CGGGAACAAGTGGGCCGAGATCGCCAAGATACTCCCCGGCAGGACGGATA
ACGCCATCAAGAATCACTGGAACTCCGCCAAGCGCCGCCTCTCTCGCCAG
CTGAACATGAGCGTCAGCAGCGTGTTGGATCGACGACAGTCAGTGTCTTC
GTCGGGCGGGGATGAGGACGAACCTCATCCGGTAACGCGTGCGAGAGGGA
TCAGCGGAGAGAGTCGAGGCCCAGCCGCAGCAGCAGCAGGAGGTGGTACC
GGCGTCGGAGTAGGCATGACGGTAGAAACTGATGGTGATGGCAGCGGCGG
TCTAGATCAGGGTCGTTGTCGGGGGTACAGCAGGGGAGACGCGACTGAGA
CGGGTAAAGAGGAGGGGAGGGGAGCCCCGGACGGAGGCGGTGACGGCCGA
ACCTCGTCACCAACCTCGGTGGCTGAGTTTGCTCTGTCGGCGGCTGGGCT
GGGGTGTAACGGCTTTCCGGCTCAATCGCAACCGCAGCAGCAGCAGCAGC
AGCAGCAGCGGGGGCATCAACGGCACCGGCGACACGAGCCAGATGATGAC
GTTGCGGGTTCTAGGGACGGCGCTTACGGTGGCACCAGCGGCAGCAGCAA
CCAACGGCTAGCGCGACCACCACCCACCGCTGCGGGAGGCCGTGCCGGCG
ACTGCGGTGATGGCTCCGCGAAGGAGGAGATGGGGGGAGGACCGGCCGCG
GGTGAAGGCTGTGGGGCAGGCGAGGGCGCTCGGACCTCGGCGGACATGAT
GTCGGCCCAGGCGCTGTTTGGGAAGAGCATCCCGGGTCTGACGTCCTTCG
ACCGAGCCGAGATGCACAGCTTCCAGCAGGAGAAGGCCCAGCTCCTCTCC
GCCGCCCGCGCGAACGGGGACACGGAGAAGCGCAAGATGCTGGAAGAGAC
CACTCCTGATGTCCTCAACGCCAAGGGGCTCTTGATGTTCCTGCGGCAAT
CGCCCTCCTCGGAGACGCCCTCTCCGTCCGCTAGCCCGGAGCTTCAGCCT
ACCACGGGAGCGGCGGCAGTGGCGGCGGGGGCGGCGGGGGGGGAGGGGCT
GGTGCTCGAAGGCGACGGTAGGAGGGTCTCGAGCCCGGGAGGGGATGATG
AGAGGGCGGGCGGCGACGGTCATGGTAGTAGACACCACTACGGCAGCAGG
GCGGGTAAGGCCGCGGTGGAGTTCTCCGGGGGAGGCGTGTGCGCGGCGAC
GGGGCCGTTAACGGCGGAGGAGGACGCGGCGGCAGTGGCCCCAGCGCGGG
CGGGTTTTGCGACGGCGGCGGCGGCGGCGGCGGCGGTGGCACCACAAAGA
ACAGTGCGGCCACCCGCGCGACCCTTCGTGGGGCCGAGCCTAGCGAACGG
AGACGGCGGTGGCAGGGGGCGGGGTCTCAGAGGTAACCGTGAGGGCGGAG
AGCAAGACGGCGGGCGCTGCAGTTTCTACCGGCCGTGGAGTGGTAGTGGT
GGAGATGTTGGTGCTGTCATCGGCGTGCGCCGGGGTGCTAGCTCGACTGC
CGCGCCAGTGTCGCCGGCCACACCCGCCGGTCGTTCTGTGTTTGGCGATG
TCGGAGGCGCCCGTTCCGCGGTGCCCGCTGCCGGTTCGGCGATGGCTGCC
CCAAGAACCGCGCCGAAGCCTAGGAAGCCGCGGTTCAGGATCCCTGTGGT
GACGCCGAGCCCGTCTTCGACGGCCAACGCTAGCAGCCAGCCCCGCCGGG
CTCCCCTCGCCGTTCATGATGCAACGCCGCCGACTCCGAGGTCATCGGGC
CCTAACACAACGGCGACGCCTTTTTCGATCGGCGTCGCTTCGGCGGCGGC
GGCGCCGCAGCATGTAGCCGTGACTCCGGGGACACCGTCGGCGAGGCGGT
CGCCGGTGGAGCTATTCACGCCGTCGCCGATGACGTCGGCGGCGGCGGCG
GCGGCAGCGGCGGGTGGTGGCGGGCGGCGCGTCACCGGTAGTGGCGCTGG
TGCTTCTCCTACCCCTCCCGCAGATTTCGACGGCCGCCGGTGTAGATCGC
CGAAACGCACGGGTCCCCCCCCCGAGGCGAAGGCAGGGCGAAACGGCGGC
AGTCGCGCTGCGTCGTCGAAGCGCAAGCAGGGAGAGGAGGGGAGGAAGGT
AGTAGAGGCGCAGAAGCGGCCGAGAGCTTCAGCTGTTTAA
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