prot_Ecto-sp13_S_contig6381.17143.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6381.17143.1
Unique Nameprot_Ecto-sp13_S_contig6381.17143.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length830
Homology
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A6H5JK21_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK21_9PHAE)

HSP 1 Score: 827 bits (2136), Expect = 6.680e-291
Identity = 541/853 (63.42%), Postives = 552/853 (64.71%), Query Frame = 0
Query:   21 MMGGEIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSVSSVLDRRQSVSSSGGDEDEPHPVTRARGISGESRGPAXXXXXXXXXXXXXXXXXXXXXXXGGLDQGRCRGYSRGDATETGKEEGRGAPDGGGDGRTSSPTSVAEFALSAAGLGCNGFPAQSQPQXXXXXXXXXXXXXXXXXXXDDVAGSRDGAYGGTSGSXNQRLARXXXXAAGGRAGDCGDGSAKEEMGGGPAAGEGCGAGEGARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETPSPSASPELQPTTGAAAVAAGAAG--------------------------GEGLVLEGDGRRVSSPGGDDERAGGDGHGSRHHYGSRAGKAAVEFSGGGVCAATGPLTAEEDAAA--VAPARAGFATXXXXXXXVAPQRTVRPPARPFVGPSLANGDGGGRGRGLRGNREGGEQDGGRCSFYR---------------PWSGSGGDVGAVIGVRRGASSTAAPVSPATPAGRSVFGDVGGARSAVPAAGSAMAAPRTAPKPRKPRFRIPVVTPSPSSTANASSQPRRAPLAVHDATPPTPRSSGPNTTATPFSIGVASAAAAPQHVAVTPGTPSARRSPVELFTPSPMTSAAXXXXXXXXXXXXVTGSGAGASPTPPAD-FDGRRCRSPKRTGPPPEAKAGRNGGSRAASSKRKQGEEGRKVVEAQKRPRASAV 829
            MMGG+IDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSV+SVLDRRQSVSSSGGDEDEPHP TR RGISG SRGP       XXXXX            GG +QGRCRGYSR DA  TG                                                                                                                          EGARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETPSPSASPELQP TG AA                                 GEGLVLEGDGRR SSPG                                                  VAPARAGFA         AP+RTV+PPARPF GP LANGDGGGR RGL GNREGGEQDGGRC  YR               PWSG+GG VGAVIGVRRGASST  PVSPATPA RSVFGDVGG R AVPA G+AM APRTAPKPRKPRFRIPVVTPSPSST NA+SQPRRAPLAVH ATPPTPRSSGPNTTATP SIGVASAAAAPQ VAVTPGTPSAR SPVELFTPSP+ S+ XXXXXXXXXXXX                FDGRRCRSPK T  PP+AKAGRNGGSRAASSKRKQ EEGRKV  AQKRPRASAV
Sbjct:    1 MMGGDIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSVNSVLDRRQSVSSSGGDEDEPHPATRPRGISGGSRGPTAAAAGGXXXXXVGMTVETGGDDSGGRNQGRCRGYSRRDAAGTG--------------------------------------------------------------------------------------------------------------------------EGARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETPSPSASPELQPATGPAAXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXGWVGEGLVLEGDGRRDSSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPARAGFAAA------AAPERTVQPPARPFAGPCLANGDGGGRERGLTGNREGGEQDGGRCGSYRAPPAPVNVVDFLPSRPWSGNGGSVGAVIGVRRGASSTPVPVSPATPACRSVFGDVGGGRPAVPATGTAMTAPRTAPKPRKPRFRIPVVTPSPSSTPNANSQPRRAPLAVHHATPPTPRSSGPNTTATPDSIGVASAAAAPQQVAVTPGTPSARWSPVELFTPSPVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDGRRCRSPKCTSIPPDAKAGRNGGSRAASSKRKQEEEGRKVEGAQKRPRASAV 725          
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A835YSF8_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF8_9STRA)

HSP 1 Score: 181 bits (460), Expect = 4.720e-49
Identity = 88/116 (75.86%), Postives = 97/116 (83.62%), Query Frame = 0
Query:   40 KRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSV 155
            KR VRKWS +ED  M  LV E G +QWGLIGS LS     RTGKQCRERWHNQLDP IKKD WT+ EE+ LM+AHS+HGN+WAEIAK+LPGRTDNAIKNHWNSAKRRLSRQLNMS+
Sbjct:   28 KRVVRKWSPEEDQLMALLVKEHGTRQWGLIGSLLSG----RTGKQCRERWHNQLDPHIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLSRQLNMSM 139          
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A835YW24_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW24_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.490e-46
Identity = 82/109 (75.23%), Postives = 91/109 (83.49%), Query Frame = 0
Query:   40 KRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLS 148
            KR VRKWS +ED  M+ LV E G +QWGLIGS LS     RTGKQCRERWHNQLDP IKKD WT+ EE+ LM+AHS+HGN+WAEIAK+LPGRTDNAIKNHWNSAKRRLS
Sbjct:    3 KRSVRKWSPEEDQLMMLLVREHGTRQWGLIGSLLSG----RTGKQCRERWHNQLDPMIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLS 107          
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A7S2CJK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJK5_9STRA)

HSP 1 Score: 171 bits (432), Expect = 6.090e-44
Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 0
Query:   22 MGGEIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQL 151
            + G    S I +  + K +R VRKW+ +ED+ M+ LV E G K WG IGS L      RTGKQCRERWHNQLDPAI+KDPWT  EE+ L++AHS++GN+WAEIAK+LPGRTDNA+KNHWNSAKRRLSRQ+
Sbjct:   28 LAGNARRSPIADFAE-KPRRVVRKWTPEEDSLMMTLVQEHGTKHWGRIGSSLQG----RTGKQCRERWHNQLDPAIRKDPWTGGEEEILLKAHSLYGNRWAEIAKLLPGRTDNAVKNHWNSAKRRLSRQV 152          
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: I2CQ47_NANGC (Myb transcription factor (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ47_NANGC)

HSP 1 Score: 155 bits (393), Expect = 1.810e-40
Identity = 73/109 (66.97%), Postives = 88/109 (80.73%), Query Frame = 0
Query:   40 KRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLS 148
            K+ VRKWS +EDAEMV+LV ELG KQWG IG +L    G R+GKQCRERWHNQLDP IKK+ W+  EE  L + H+ +GN+WAEIA+ LPGRTDNAIKNHWN+A+RR+S
Sbjct:   20 KKMVRKWSAEEDAEMVRLVKELGTKQWGQIGIQL----GGRSGKQCRERWHNQLDPNIKKEAWSAEEEMVLQQKHAEYGNRWAEIARFLPGRTDNAIKNHWNNARRRMS 124          
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A7S0SQE8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQE8_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.010e-38
Identity = 80/124 (64.52%), Postives = 94/124 (75.81%), Query Frame = 0
Query:   27 DHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQ 150
            DH D+ N     +KR VRKW+++ED  M+ LV E G + WGLIG++L+     RTGKQCRERWHNQLDPAI K PWT+ EE  L+ AH+  GN+WAEIAK LPGRTDNAIKNHWNSAKRRL RQ
Sbjct:    7 DH-DLSNG----QKRTVRKWTQEEDNLMMALVSEHGTRHWGLIGAKLNG----RTGKQCRERWHNQLDPAINKTPWTEHEESLLLAAHNDLGNRWAEIAKRLPGRTDNAIKNHWNSAKRRLLRQ 121          
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A8K1FIZ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIZ4_PYTOL)

HSP 1 Score: 154 bits (390), Expect = 8.040e-38
Identity = 79/154 (51.30%), Postives = 105/154 (68.18%), Query Frame = 0
Query:   27 DHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQ---LNMSVSSVLDRRQ---SVSSSGGDEDE 174
            D      +   K ++ V KW+++ED  M+KLV + G + W +IG++L      R GKQCRERWHNQLDPAI+KDPWT  EE  L  +H ++GNKWAEIAK+LPGRTDNAIKNHWNS+KRRL R    ++ S+S    R++   S++S+G   DE
Sbjct:   16 DEDHYRGSKKRKERKPVCKWTEKEDQMMIKLVQKYGTRHWTIIGTKLPG----RNGKQCRERWHNQLDPAIRKDPWTDEEERILRESHELYGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRSSSTVSGSLSLTRPRKRRCSSITSNGSSSDE 165          
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A7R9U0E6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0E6_9STRA)

HSP 1 Score: 160 bits (405), Expect = 2.780e-37
Identity = 76/118 (64.41%), Postives = 91/118 (77.12%), Query Frame = 0
Query:   34 ALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQL 151
            +   ++KR VRKW+ +ED  M+ LV   G K+WGLIG RL      RTGKQCRERWHNQLDP+I+KDPW+K EE  L+  H   GN+WAEIAK+LPGRTDNAIKNHWNSAKRRL+RQ+
Sbjct:   14 SASGRKKRQVRKWTPEEDKLMMDLVNTFGTKRWGLIGGRLQG----RTGKQCRERWHNQLDPSIRKDPWSKQEEAILIVVHQQVGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLTRQM 127          
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: W7T3Y1_9STRA (Myb transcription factor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3Y1_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.830e-37
Identity = 72/106 (67.92%), Postives = 86/106 (81.13%), Query Frame = 0
Query:   43 VRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLS 148
            VRKWS +EDAEMV+LV ELG KQWG IG +L    G R+GKQCRERWHNQLDP IKK+ W+  EE  L + H+ +GN+WAEIA+ LPGRTDNAIKNHWN+A+RR+S
Sbjct:    2 VRKWSAEEDAEMVRLVKELGTKQWGQIGIQL----GGRSGKQCRERWHNQLDPNIKKEAWSAEEEMVLQQKHAEYGNRWAEIARFLPGRTDNAIKNHWNNARRRMS 103          
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Match: A0A0P1AEH6_PLAHL (Myb-like dna-binding n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEH6_PLAHL)

HSP 1 Score: 150 bits (380), Expect = 6.750e-37
Identity = 73/125 (58.40%), Postives = 91/125 (72.80%), Query Frame = 0
Query:   25 EIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSR 149
            E+    + N+   +RK  V KW+++ED  M+KLV + G + W +IG++L      R GKQCRERWHNQLDPAI+K+PWT  EE TL + H   GNKWAEIAK+LPGRTDNAIKNHWNS+KRRL R
Sbjct:   11 ELTQQHLENSTRKERKP-VCKWTEKEDLLMIKLVQKYGTRHWTVIGTKLPG----RNGKQCRERWHNQLDPAIRKEPWTPDEERTLKKLHDTFGNKWAEIAKLLPGRTDNAIKNHWNSSKRRLKR 130          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6381.17143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK21_9PHAE6.680e-29163.42MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835YSF8_9STRA4.720e-4975.86Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A835YW24_9STRA1.490e-4675.23Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S2CJK5_9STRA6.090e-4463.08Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
I2CQ47_NANGC1.810e-4066.97Myb transcription factor (Fragment) n=1 Tax=Nannoc... [more]
A0A7S0SQE8_9STRA1.010e-3864.52Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A8K1FIZ4_PYTOL8.040e-3851.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7R9U0E6_9STRA2.780e-3764.41Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7T3Y1_9STRA5.830e-3767.92Myb transcription factor n=1 Tax=Nannochloropsis g... [more]
A0A0P1AEH6_PLAHL6.750e-3758.40Myb-like dna-binding n=1 Tax=Plasmopara halstedii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 98..146
e-value: 8.2E-16
score: 68.5
coord: 42..95
e-value: 2.2E-9
score: 47.2
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 45..92
e-value: 8.1E-10
score: 38.7
coord: 99..142
e-value: 1.6E-14
score: 53.8
NoneNo IPR availableGENE3D1.10.10.60coord: 43..99
e-value: 1.2E-16
score: 62.3
NoneNo IPR availableGENE3D1.10.10.60coord: 101..165
e-value: 1.6E-18
score: 68.3
NoneNo IPR availablePANTHERPTHR45614:SF1MYB PROTEINcoord: 37..291
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 37..291
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 36..93
score: 11.401
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 94..148
score: 26.096
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 42..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6381contigEcto-sp13_S_contig6381:2178..7453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6381.17143.1mRNA_Ecto-sp13_S_contig6381.17143.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6381 2178..7453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6381.17143.1 ID=prot_Ecto-sp13_S_contig6381.17143.1|Name=mRNA_Ecto-sp13_S_contig6381.17143.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=830bp
LGVDSSRYRPYHQPERVAGGMMGGEIDHSDILNALDAKRKRCVRKWSKQE
DAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKD
PWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQ
LNMSVSSVLDRRQSVSSSGGDEDEPHPVTRARGISGESRGPAAAAAGGGT
GVGVGMTVETDGDGSGGLDQGRCRGYSRGDATETGKEEGRGAPDGGGDGR
TSSPTSVAEFALSAAGLGCNGFPAQSQPQQQQQQQQRGHQRHRRHEPDDD
VAGSRDGAYGGTSGSSNQRLARPPPTAAGGRAGDCGDGSAKEEMGGGPAA
GEGCGAGEGARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLS
AARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETPSPSASPELQP
TTGAAAVAAGAAGGEGLVLEGDGRRVSSPGGDDERAGGDGHGSRHHYGSR
AGKAAVEFSGGGVCAATGPLTAEEDAAAVAPARAGFATAAAAAAAVAPQR
TVRPPARPFVGPSLANGDGGGRGRGLRGNREGGEQDGGRCSFYRPWSGSG
GDVGAVIGVRRGASSTAAPVSPATPAGRSVFGDVGGARSAVPAAGSAMAA
PRTAPKPRKPRFRIPVVTPSPSSTANASSQPRRAPLAVHDATPPTPRSSG
PNTTATPFSIGVASAAAAPQHVAVTPGTPSARRSPVELFTPSPMTSAAAA
AAAAGGGGRRVTGSGAGASPTPPADFDGRRCRSPKRTGPPPEAKAGRNGG
SRAASSKRKQGEEGRKVVEAQKRPRASAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf