mRNA_Ecto-sp13_S_contig638.17140.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig638.17140.1
Unique NamemRNA_Ecto-sp13_S_contig638.17140.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: D7G2C3_ECTSI (Putative Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C3_ECTSI)

HSP 1 Score: 581 bits (1497), Expect = 2.760e-207
Identity = 287/290 (98.97%), Postives = 289/290 (99.66%), Query Frame = 1
Query:    1 MSDSGSAKTVSVAVGAGLAAAGLVVGLAGPKVVEKILLKLKPGGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA 870
            MSDSGSAKTVSVAVGAGLA AGLVVGLAGPKVVEKILLKLKPGGKFSGMNKPTAGARTVKEL+VGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEY+IADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA
Sbjct:    1 MSDSGSAKTVSVAVGAGLATAGLVVGLAGPKVVEKILLKLKPGGKFSGMNKPTAGARTVKELEVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYSIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA 290          
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A835ZJ35_9STRA (Putative glutathione S-transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ35_9STRA)

HSP 1 Score: 367 bits (942), Expect = 6.080e-123
Identity = 172/267 (64.42%), Postives = 210/267 (78.65%), Query Frame = 1
Query:   73 VGLAGPKVVEKILLKLKPGGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQ-NGAFKEYHSA 870
            +G A P +V      LKPGG F+G+N  TAGART K+L VG H LQLYSMATPNGQKVTIALEEMGL+YDAWY  IM  DQFTSGFV VNPNSKIPA+VD D PGGKP++LFE+G+ILLYLAE+SGK LP DPA + ECLNWLFF VG APYFGQ+GHF RYAP+K+ Y ++RY+ E +R L VLD++L G++FL GEE TIAD+AW+PWV+CL +FY+  + L +S Y  V  W+E + +RPA AKG+ INS A+ N  +KEYHS+
Sbjct:   24 LGAATPTLVSAAKQYLKPGGAFAGLNSATAGARTQKDLPVGQHALQLYSMATPNGQKVTIALEEMGLRYDAWYIGIMDQDQFTSGFVAVNPNSKIPAMVDKDGPGGKPVNLFESGSILLYLAEKSGKLLPKDPALRTECLNWLFFQVGAAPYFGQYGHFARYAPIKIKYGIDRYALETKRILSVLDQRLMGRTFLVGEELTIADLAWMPWVQCLSVFYKGDEPLGLSEYQEVMRWKENLLSRPAIAKGMRINSPAEENQQYKEYHSS 290          
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: E8Z6K5_PFIPI (Glutathione S-transferase (Fragment) n=1 Tax=Pfiesteria piscicida TaxID=71001 RepID=E8Z6K5_PFIPI)

HSP 1 Score: 315 bits (806), Expect = 6.290e-103
Identity = 151/247 (61.13%), Postives = 188/247 (76.11%), Query Frame = 1
Query:  145 MNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMG---LKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAER-SGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQL-EGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA 870
            +NKPTAGAR  +EL VG HP+QLYS+ATPNGQKVTI LEE+G   +KYDA+  NIM+GDQFTSGFV VNPNSKIPA++D D PGGK + +FE+GNIL YLAE+   + LP+DPA + E  NWL+F VG  PYFGQFGHF +YA  K+DYA+NRY  E QR LDVLDK+L E  ++L G  Y+IAD+AW PWVRC++  Y A++ + +  Y NV AW +++ ARPA  KGL INS + NG  +EYHSA
Sbjct:    2 INKPTAGAREERELPVGEHPIQLYSLATPNGQKVTILLEEIGEEKVKYDAYLINIMAGDQFTSGFVAVNPNSKIPAMIDRDGPGGKTVRVFESGNILQYLAEKYQSELLPSDPAERLEVFNWLYFQVGAGPYFGQFGHFYKYANEKIDYAINRYKMETQRLLDVLDKRLAETGAYLAGPNYSIADIAWFPWVRCIDTGYSAWEEIGVDEYKNVRAWFDKISARPAVEKGLRINSSSDNG-IREYHSA 247          
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A7S4JSJ9_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JSJ9_9EUKA)

HSP 1 Score: 310 bits (794), Expect = 1.030e-100
Identity = 145/251 (57.77%), Postives = 187/251 (74.50%), Query Frame = 1
Query:  115 KLKPGGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHS 867
            K K    FS +N+PTAGAR  K+L  G HP+QLYS+ATPNG KVT  L E+GL +DA+  NIM G+QF SGFV +NPNSKIPALVD + P G+ +++FE+GNILLYLAE++G+F+P+DP  + ECLNWLF  +G  PYFGQFGHF +YA  K+ YA++RY+ E QR L VLD+ LEGK +L G+E TIAD AW+PWVRC+E  Y A + + +  Y NVAAW +R  ARPA A+GL IN+ A + A+  YH+
Sbjct:    5 KKKESSAFSSINRPTAGAREQKDLPAGEHPIQLYSLATPNGIKVTTLLIELGLAFDAYKINIMKGEQFWSGFVDINPNSKIPALVDKNGPNGQSVNVFESGNILLYLAEKTGRFIPSDPVKRVECLNWLFHQMGAGPYFGQFGHFYKYANEKIPYAIDRYTMETQRLLSVLDQALEGKEWLVGDELTIADFAWIPWVRCIETGYNAKEHVGLDNYKNVAAWCDRWLARPAVAEGLKINAWAPD-AYANYHT 254          
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A2R5GYV1_9STRA (Glutathione S-transferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYV1_9STRA)

HSP 1 Score: 306 bits (783), Expect = 8.040e-99
Identity = 154/277 (55.60%), Postives = 194/277 (70.04%), Query Frame = 1
Query:   46 AGLAAAGLVVGLAGPKVVEKILLKLKPGGKF--SGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA 870
            AG+A   LV G+   + + K  L    G K   SG N+ T+G R  + L VG HPLQLYS  TPNGQKVT+ALEEMGL YDA + +I  GDQFTSGFV++NPNSKIPALVD + P GK + +FET +ILLYLAE+SGK +P DPA K E +NW+ +  G APYFGQFGHFT+YA VKL Y + RYS E QR LDVLDKQLEGK ++ G EYT+AD+  +PW+ CL  FY A +TLE+ +Y NV  W  R+++RPA   G+ IN G  +  ++ Y S+
Sbjct:   19 AGVAGLALVAGMGIARPLYK-RLDYAAGVKLAHSGSNRATSGVREQRSLPVGKHPLQLYSAGTPNGQKVTVALEEMGLAYDAHFISI-GGDQFTSGFVEINPNSKIPALVDREGPNGKEIRVFETASILLYLAEKSGKLVPKDPAQKVEMMNWIMWLQGSAPYFGQFGHFTKYAKVKLGYPIERYSMEAQRLLDVLDKQLEGKDYILGSEYTLADINTMPWINCLSQFYNADETLELDSYKNVQKWMARIKSRPAVKLGMQIN-GFGDSKYRNYSSS 292          
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A7S3PBB9_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3PBB9_9STRA)

HSP 1 Score: 298 bits (762), Expect = 1.590e-95
Identity = 144/259 (55.60%), Postives = 185/259 (71.43%), Query Frame = 1
Query:   94 VVEKILLKLKPGGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQ-FGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHS 867
            VV K+ ++ K  GK+  +NKPTAGAR   +L  G HPLQL+S+ TPNGQKVTI LEE+G++YDAW  NI  G+QF+SGFV+ NPNSKIPAL+D       P+ +FETG+ILLYLAE+  KF+P D  AKAEC+NWLF+N+G AP+ G  FGHF  YAPV ++YA+NR+S E +R LDVLDK L   +++ GEEYTIADMA  PWV+CL+  Y A + L+ + Y NV  W E +E RPA  +GL +N   +N    E HS
Sbjct:   36 VVPKVWVEPKIEGKWGAINKPTAGARFEAKLPRGDHPLQLHSLGTPNGQKVTIMLEELGVEYDAWKVNIGKGEQFSSGFVEANPNSKIPALLDYSENSAVPVRVFETGSILLYLAEKYDKFVPKDSRAKAECMNWLFWNIGTAPFIGGGFGHFYHYAPVNIEYAINRFSMETKRILDVLDKHLAVNAYMAGEEYTIADMAIFPWVKCLDWGYNAAEFLQFNEYENVIRWIENIEERPAVKRGLKVNGWGEND-LPERHS 293          
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A448ZIJ3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIJ3_9STRA)

HSP 1 Score: 286 bits (731), Expect = 5.220e-91
Identity = 142/254 (55.91%), Postives = 178/254 (70.08%), Query Frame = 1
Query:  130 GKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAP-------GGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQ-FGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHS 867
            G   GMN+PTAG R   EL  G H LQLYS+ TPNGQKVTI LEE+G+ YDA+  NIM  +QF S FV +NPNSKIPAL+D   P         +PL LFE+G+ILLYLAER  KFLPTDP A+ ECLNWLF+ +G APY G  FGHF +YAP+K++YA++R++ E +R +DVLDKQLE K ++CG EYTIADMA  PW+RCL   Y+  + L++ TY+NV  W   +  RPA  +GL +N G    A +E HS
Sbjct:   29 GVMGGMNRPTAGKRFDSELPRGEHDLQLYSLGTPNGQKVTILLEELGVDYDAYTINIMQLEQFGSAFVDINPNSKIPALLDYAPPCESSXESEKEPLRLFESGSILLYLAEREKKFLPTDPRARTECLNWLFWQMGTAPYLGGGFGHFYKYAPLKIEYAIDRFAMEAKRIVDVLDKQLEQKDYVCGSEYTIADMAIYPWIRCLHTGYKGTEFLQLETYANVERWMATLAERPAVRRGLRVN-GFGEDAVRERHS 281          
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A7S4A9V9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9V9_9STRA)

HSP 1 Score: 282 bits (721), Expect = 1.850e-89
Identity = 142/264 (53.79%), Postives = 181/264 (68.56%), Query Frame = 1
Query:   94 VVEKILLKLKPGGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPAL-----VDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQ-FGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHS 867
            VV K  +    GG   GMN+PTAG R   EL  G H LQLYS+ TPNGQKVTI LEE+G+ YDA++ +IM   QF S FV +NPNSKIPAL     VD D    KPL +FE+G+ILLYLAER  KF+PTD   K EC+NWL + +G  PY G  FGHF +YAP+K++Y + R++ E +R +DVLDK LEGK ++CG+EYTIADMA  PW+RCL+  Y A + L++  Y+NV  W   +EARPA  +GL +N G +  A +E HS
Sbjct:   22 VVAKQWVPKSLGGIVGGMNRPTAGKRFDSELPRGEHDLQLYSLGTPNGQKVTILLEELGVDYDAYFIDIMELQQFGSAFVDINPNSKIPALLDYSVVDVDDDSSKPLPVFESGSILLYLAEREKKFVPTDLRKKTECMNWLMWQMGTGPYLGGGFGHFYKYAPLKIEYGIERFTMETKRIVDVLDKNLEGKEYVCGDEYTIADMAIYPWIRCLDKGYGASEFLQLQEYTNVQRWIATLEARPAVQRGLRVN-GYEADAVRERHS 284          
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A7Y7XWP8_9PSED (Glutathione-dependent disulfide-bond oxidoreductase n=16 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A7Y7XWP8_9PSED)

HSP 1 Score: 277 bits (709), Expect = 1.040e-87
Identity = 142/280 (50.71%), Postives = 189/280 (67.50%), Query Frame = 1
Query:  127 GGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEM------GLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQ-FGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEI--FYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIIN--SGAQNGAFKEYHSA*QLVCRSLQCDLFEERVGALN 933
            GGKF+ +N+P AGA   KEL +G HPLQLYS+ATPNGQK+TI LEE+      G +YDAW   I  GDQF SGFV VNPNSKIPAL+D+  P  KP+ +FE+G IL YLAE+ G FLPT+PAA+AECL+WLF+ +G APY G  FGHF  YAP K++YA++R++ E +R LDVLDK+L    ++ G+EYTIADMA  PW   L     YEA + L +  Y +V  W + ++ARPA  +G ++N  SG  +   +E H A     R+      E+++ A++
Sbjct:   20 GGKFANINRPIAGATHDKELPIGRHPLQLYSLATPNGQKITILLEELLALGHQGAEYDAWLIRIGDGDQFGSGFVDVNPNSKIPALMDHSGP--KPIRIFESGAILQYLAEKFGAFLPTEPAARAECLSWLFWQMGSAPYLGGGFGHFYAYAPTKIEYAIDRFAMETKRQLDVLDKRLAVSEYIAGDEYTIADMAIWPWYGGLAKGRLYEAAEFLSVQDYRHVQRWADAIDARPAVQRGRMVNRVSGEPSSQLRERHDASDFATRT------EDKLAAVS 291          
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A0X8EX79_PSEFR (Glutathione-dependent disulfide-bond oxidoreductase n=8 Tax=Pseudomonas TaxID=286 RepID=A0A0X8EX79_PSEFR)

HSP 1 Score: 276 bits (707), Expect = 1.400e-87
Identity = 144/266 (54.14%), Postives = 183/266 (68.80%), Query Frame = 1
Query:  127 GGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEM------GLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQ-FGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCL--EIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIIN--SGAQNGAFKEYHSA*QLVCRS 891
            GG F+ +N+P AGA   KEL VG HPLQLYS+ATPNGQKVTI LEE+      G +YDAW   I  GDQF+SGFV VNPNSKIPAL+D+  P  KP+ +FE+G ILLYLAE+ G F+PT+PAA+AECL+WLF+ +G APY G  FGHF  YAP+K++YA++R++ EV+R LDVLDKQL    ++ G++YTIAD+A  PW   L     YEA   L +  Y +V  W + VEARPA  +G  +N  SG  +    E H A  +  RS
Sbjct:   17 GGTFASINRPVAGATHDKELPVGRHPLQLYSLATPNGQKVTILLEELLALGHQGAEYDAWLIKIGEGDQFSSGFVAVNPNSKIPALMDHSGP--KPVRIFESGAILLYLAEKFGAFVPTEPAARAECLSWLFWQMGSAPYLGGGFGHFYAYAPIKIEYAIDRFAMEVKRQLDVLDKQLAVNEYVAGDQYTIADIAIWPWYGGLLKGRLYEAAQFLSVQDYKHVQRWADAVEARPAVQRGRRVNRISGDPSQQLPERHDASDIDARS 280          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C3_ECTSI2.760e-20798.97Putative Glutathione S-transferase n=1 Tax=Ectocar... [more]
A0A835ZJ35_9STRA6.080e-12364.42Putative glutathione S-transferase n=1 Tax=Tribone... [more]
E8Z6K5_PFIPI6.290e-10361.13Glutathione S-transferase (Fragment) n=1 Tax=Pfies... [more]
A0A7S4JSJ9_9EUKA1.030e-10057.77Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A2R5GYV1_9STRA8.040e-9955.60Glutathione S-transferase n=1 Tax=Hondaea fermenta... [more]
A0A7S3PBB9_9STRA1.590e-9555.60Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A448ZIJ3_9STRA5.220e-9155.91Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4A9V9_9STRA1.850e-8953.79Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7Y7XWP8_9PSED1.040e-8750.71Glutathione-dependent disulfide-bond oxidoreductas... [more]
A0A0X8EX79_PSEFR1.400e-8754.14Glutathione-dependent disulfide-bond oxidoreductas... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig638contigEcto-sp13_S_contig638:16164..21985 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score270.4
Seed ortholog evalue9.8e-70
Seed eggNOG ortholog55529.EKX45234
Model size1272
KEGG rclassRC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG free text desc.Belongs to the GST superfamily
EggNOG OGsCOG0625@1,KOG0867@2759
Ec32 ortholog descriptionPutative Glutathione S-transferase
Ec32 orthologEc-16_001680.1
EC2.5.1.18
Cds size873
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig638.17140.1prot_Ecto-sp13_S_contig638.17140.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig638 16164..21586 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463883.3341684-CDS-Ecto-sp13_S_contig638:16163..163071681463883.3341684-CDS-Ecto-sp13_S_contig638:16163..16307Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig638 16164..16307 +
1681463883.3519638-CDS-Ecto-sp13_S_contig638:17194..173561681463883.3519638-CDS-Ecto-sp13_S_contig638:17194..17356Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig638 17195..17356 +
1681463883.3649755-CDS-Ecto-sp13_S_contig638:17895..179821681463883.3649755-CDS-Ecto-sp13_S_contig638:17895..17982Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig638 17896..17982 +
1681463883.3771183-CDS-Ecto-sp13_S_contig638:18482..185991681463883.3771183-CDS-Ecto-sp13_S_contig638:18482..18599Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig638 18483..18599 +
1681463883.3924565-CDS-Ecto-sp13_S_contig638:19402..194821681463883.3924565-CDS-Ecto-sp13_S_contig638:19402..19482Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig638 19403..19482 +
1681463883.4041529-CDS-Ecto-sp13_S_contig638:20517..206341681463883.4041529-CDS-Ecto-sp13_S_contig638:20517..20634Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig638 20518..20634 +
1681463883.4136205-CDS-Ecto-sp13_S_contig638:21420..215861681463883.4136205-CDS-Ecto-sp13_S_contig638:21420..21586Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig638 21421..21586 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463883.4259598-UTR-Ecto-sp13_S_contig638:21586..219851681463883.4259598-UTR-Ecto-sp13_S_contig638:21586..21985Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig638 21587..21985 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig638.17140.1

>prot_Ecto-sp13_S_contig638.17140.1 ID=prot_Ecto-sp13_S_contig638.17140.1|Name=mRNA_Ecto-sp13_S_contig638.17140.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
MSDSGSAKTVSVAVGAGLAAAGLVVGLAGPKVVEKILLKLKPGGKFSGMN
KPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNI
MSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSG
KFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYST
EVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEM
STYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA*
back to top

mRNA from alignment at Ecto-sp13_S_contig638:16164..21985+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig638.17140.1 ID=mRNA_Ecto-sp13_S_contig638.17140.1|Name=mRNA_Ecto-sp13_S_contig638.17140.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig638:16164..21985+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTGATTCTGGGTCGGCGAAAACTGTGTCTGTCGCCGTAGGGGCAGG GCTTGCGGCTGCCGGCCTTGTCGTTGGACTCGCAGGCCCGAAGGTGGTCG AGAAAATCCTCCTCAAATTGAAGCCCGGTGGAAAGTTCAGCGGGGTGAGT TGCTGCTGAGCACCAGACACCTTGGTTCTATTGGCTCGCTTCACGTTCCG ATGCGACAAGATAACATACATTACCGCCGCCCTATCATCGCTGCACCCTT TGCGGCCTGGCCCCTCCACGCCTCACCGAGTAGCTGCAAGGCCTCTTCTT TCGTTGGGTGGATACCTTAGCGGGGTCCGGATGTGGCGCGTCGCGGACGA TATAATTTGCCCCACATCAGCCAGGCACCGTTTAATTGTGTGGACAAGAC GGGGTCGGGATACTTTGGGTCATGGACGATGTAATTGCCCTACAACGTCT TTGCTGCACGTAGCCGTTGAAAAACACAGCTACTGCTGCTACTGCTGCTG CTGCTGCTGCTGTGTCATGTTCCTGCCACGTGAGCAGCCGTTGTTACACA CTGCGGATGGTGCCGTTCCGCGTTCAGTGCGATGGGGAGCATGAACATTG ACATACTGACGGGCACACACTGCGACTTCTAGCGCGGGGAGGTCCTCCTC GCCCGAATCCTACTGGCGCTTCTTCTCGAAACGACCAACCGATTTTTCGG AGGAGTTCTCGTCTCGCTGGTGCACACATCACCGTTCTCACGTTTCGTCA TGGCCGTCTTCATAGAGGAGCGTCCATGTGTAGATGTTGCATCGAAACGA CCCACTACGATACGGATGGTAGGCCGGACGACCGTTACAATATTGGGCCC ACCTGCCTCACCCCCCCCCCCTTTTTTTCTCAATCACTCGATTTCGGCCC TCGTCCGCTGTTTTCTCTTCTCGAAGCTCTGCAGCAGCATCAGCTATGTG TTGTTCGTACTGTCCAGACCCCCTCCCCAATCAACGATTTTCGGCTGCCT TCGAATCCCCCTTGCTGATGAACCTCTACAGATGAACAAGCCAACGGCAG GGGCAAGGACGGTCAAGGAGCTGGACGTCGGCACCCACCCCCTACAGCTG TACTCGATGGCCACGCCGAACGGGCAGAAGGTCACCATCGCGCTGGAAGA GATGGGGCTCAAGTACGACGCTTGGTACACGAACATCATGTCGGTGAGGA GTGTGAGACTTCTTCCCTCTCCGTCGTTTGGTGTCCGTCCGTGTTGTTGT TGGTGTTGGTTGGTGTTTATCGTTGTCGGGTGTCGGTTGATGTTGTTGTT GTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTAAGTTT GTTGTTGCTAGTTAGGTTTCGACTATGCGAAGCGTACCCTGTAGGCGAGA GCGGGTAGTATCTGCGGCCCAGAAGCTAGGAAATACGCGCATGCGAGGGT CCTCGCAGTAAATTGGCGCCGGTGCTCATAACTACGGTTGTGTTCGTGCC CGCCACAACCTCTAGATTCCAATAACTCGGATTTCAACCACACCGGGTGT GACACGAGGTGAAAATACGAAAATACGACAGGCCCTCTTTCTGCTGCATA CGAAACCTTGGAAGACAACACAAATTGCTGATGTCTGGTCCCCCTATTGG TCTTCGTTTCCCTGCTCGTTCGCGACGTCTCGCGCTCGCGTAACCCTGGG TTCGCCTGTGTGTGCCGCCCTTCGCTTGGCAGGGGGACCAATTCACGTCT GGCTTCGTCAAGGTCAACCCCAACTCCAAGATCCCAGCCCTGGTGGACAA CGACGCGCCGGGCGGCAAGGTGTGCGGGCGTGTTGCGGTTGCCGTTGCGG GATGTCGTCACGACAGTCGCTCTCTCTCTCTCTTCGTCTCTCTTTGTCTA TCGCTGTCTGTCTCTGTCTGTCTCTGTCTGTCTGTCTGTCTGTCTGTTTC CCTTTGTCTTTGTCTCTCTCTCTCTGTGTCTCTCTGTCTCTGTCTGGATG CCTTGGTTTGCGCTGACGGGCGCGTTTGTCGCACGCCGTGCCTCCTCTCT CGTGTGTGTCGATTTAGGCGGATAGCGCGGCGGGTCTTAAAACGCTTGGC TTGACCCACCATTGGCTCATTTTGGCCACGCTGCAGATACCGTTGTTCAT TCGTCTCTTGATGCGTTTGCCGCGATTTGTTTTTGTCGTCGTTCACTTGG TAAATTTTGTCACTGCCACTGCACCAACATTATTCTCAGTCTCGTTTGTT CTTCCCACCCCCATCCTGCATATTTGCAACACAAAAACACGTTTTATTTC TTCGTCCCCGTTCCGCCAGCCCCTTCACCTCTTCGAGACCGGTAACATTC TCTTGTACCTCGCCGAGCGAAGCGGCAAGTTCCTCCCGACAGACCCGGCG GCGAAGGCGGAGTGTCTCAACTGGCTTTTCTTCAACGTGAGTCCTGTTTG TTGTGTGGATTATTTAGCGTTGGTTTTGCCATCAATCGCGGGCGCCGTTT TGTTTTGTTTTTGTTGTCTTTCTATCGCTGGCATTGGTGGCAAGTTGCTG GTGTTGGTGACGAACGCCGTGGCGATGGTTTTCACGTGGTGTTTTCCCGC GGTCGTTGCTGGATGTTTGCCATCCGTCGTCGGCGTCTTCAGTTTTTCGG TCTTTTTGGCTGATGTTGGTCCCAACAGAAGTAGTAGTAATGGTTTTCCC ATGTATTATTTCTCCGCCGTTCTCGATGCTTGCCTCCCGTCGTCAGCGTT TGTTTGAGTTATGTGTCTTTCTGATGTTGGTGACAACACCAGCGGCGTTT TTTTTTTCCGTTTTTCGTCTGCGGATGGTGGCGGTTGTATTTCGGTTGTC GGTGCTTGATCGGCTTGTTCGTTGGAATTTGTCCTTCGTGTACGCGTCTG TTCTGCACGTGTCGGGAAGGCTTGCCTGGGGGAGGAGCCTACACTCAAAA AACAACGGCGGTCTTGTCCTATCTGTCCATGGGCCATGTACTGCGTGGCC AAACACGCCTTCCGCGCACCCCCAGCTTGTCCGCACTGCTGCGGCAAATC TTTTCCACAAGGCCAGGCTACCAATGCATCGAAGCTCTGCTGGCGCCGAA GCTGCGTTTAGCGTCTTGCGTGTGTGTCGCGGCTTGCGAGCCAGAGTCCA CCTTCCGCCTTGCCGTCCCTTCTTTACCGCAGACCCTCGGTGGCTTTACG TTCCGTGTTCACACCGCTGTCCGCGTGCTGTGTTGTTAGGTCGGCGAGGC TCCGTACTTTGGACAGTTTGGCCACTTCACGAGATATGCTCCTGTCAAGC TCGACTACGCCGTCAACAGGTGAACAAAATTTAGCGTACCTTTCCCCACC TATTGCTATGGGTCTCTTGGCGATAGCTGTGTGTGCAAGTCGAAGTCTTA CTCGCGCGTGCACGTCGTTGGACTAGCTGTTTCTTGAAGCGCGTTTGCGG GATGGCTCGAAGATCGTAGCCGGTTGCCCCGTATTTCGATGAAGCGAGAA CGACCGTGTAGCGCCGTGCCGTACCAATCCCTCTTAAACTGTTGAGACAG CACGCCCATGGATTCTCAACTCCAAACAGGAAGCAACGAACGGGTTTTTC TTCCACCCACTGTAAAGACTTCGAGACATCCCTTTCGACTGTGGTGCTGT TTTCTTGAAGTTGTGTTGTAGTACTTCTGTGTTTGTATGATATTTTTTCG GAAAACCTTCAACGTGCTTGTCTTTTAAGCCTGGCGACGGTGTGTGAAAA TACCCTCCGGAAGGCATTGATTCGTTTCAACACACACACACTCACCGTTT CTATCTTTGATGCGGAGAATAGGTTAGTCTCCCCCGTGCCGCCCCCTCAC GGGATCCCAGTTGATGGCATTTAGAAGTGTTTTGTGTTTTCACCCGCACT GAGACTGACGTCTTTTCATTGTTCAGCCAGTTAGTGCGGTCGATGCTAAT AATAAAAACACACACACCCTCACTCCTCGAAGTTTGCTTTTTTTCTTCGG GCTCAACCATGCCTGAGGCCAACATGCGGACTGCACCCCAGGGTGGCTCG AACCTCAAGCGATCATCTCAACAAAAGCGGAAGCTCGTTGGAAAGTGGGC AAATGGCACCACGAGCTCGCTGCGCATGTGCATATGATGTGCCTGACACG TCCTTGGCGACGTTTGAGACCAGCCTCACAGGCCTTGTTCGTTTCCCATG TGTGTGTGGTATGCGTATGTGGCATGGGTTGCGGTATTTTTCTCATACTC CTTTTTCTGGGGCTTTTGTGACCGGGCGCTCTCCTCCTTCTCCCTCCCTC CCTCCCTCCCTCCCTCCCTCCCTCTCTTTCTCGCGTGGGGACGAAACCCG AAAGGTACTCGACTGAGGTGCAGCGCGCGCTTGACGTGCTGGACAAGCAG CTCGAGGGGAAGAGTTTCTTGTGTGGCGAGGAGTACACCATCGCGGACAT GGCATGGCTTCCATGGGTCCGGTGAGCGTTCCCCTTCGTGCTGTGTTCCC GCGGTGTTGGGCTGTGCGGCTAACGGCATGTAAAGTAGGGTGCTGACGTG GGTGGCGATTGCCAATGATCCACATCCAGAATGAGAGAGATATCAACTCC AACACAGAGGCAACACAAGCGAAAGGTGCACTTTATACCTCTGTTTTTTT TTTCAGTACGTACTGAAGTACTTATGTATTTTCTCCAGAACATATGGTCT CATGGAAGGAGGATCACCCATCCGAAAAGGTGCTCAACCCGGGTGGATGT ATGTGATGGTGTGGAAGTTCTCAAGACTAAGTGCCACGTGTAGGAAAAAC GAAAACGCTCTGTTCCTTTTCCGTCGAGGAGAACGGTTCTTGAGATAAGC GGTCGGAATTGGTTGTCTACCGGGGCGGGGGATTGGGCTTGAGTTGCTGC ACAGCGCGAGAAGCAGCGAAGGCAAGAGAGTTTTCTTAACGACGCGCGGG AGGAGAATCGCTCCGCTCCCCGGTGGACTACCGCCTTACCGAGAGAAGCA GAACAGACGCATGCAATGGGGACGGTTGGCATCATGAGGGACTACTGACT GTTCAAACCACGAAACCCCGCTCCTTGCCCACGTGGCACTTTTTGTTTTT CTCGAGAGGACACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCA ACACACCCAAAAAAAACAACACCACACCTCTTACTTCTTTCTTCAATCAG TCACCCCACGCCGCGCCACCGGCGCGCGTTCCCGCCCGACCGCCATTTCA CGCGCAGATGTTTGGAAATTTTTTACGAGGCCTACGACACGCTGGAGATG TCGACCTACTCGAACGTGGCGGCGTGGCGCGAGAGGGTGGAGGCGCGACC TGCAACAGCCAAGGGGTTGATCATCAACTCCGGTGCACAGAACGGGGCCT TCAAGGAGTATCACTCCGCCTAACAGCTGGTTTGCCGTTCGCTACAGTGC GATTTGTTTGAGGAGCGTGTTGGCGCTCTGAACGCGGTCGATTTTGTTGT GGTTGGCTGGGAATTGTTTTTGTGTTTCTTCTGTTCTGTTTTCTCGGAGC TATCTATGCGTAAGTGTTACCGGAGACCGCAGGGAATGCGCTCGTTCGCC GACCCCAAACGTGGACGTTCAAGCGGCTGGGTTTTCCTCTTGGTTGATGT CGAAGCGCGCAATCTTAAGCTGTTTGCCGCTGCCGCCGCGGAAAGACAGC GCTCTCGCGCACGCGAACGATCAATCAAGAGCTTGGAGGTACAGCTGTCC CTTTTTGTAGCAGCAGCCTTCGCACTGTTTTCCGAATTTTGTGAACATGT TGGACAAAGCATATAATGGGGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig638:16164..21985+

>mRNA_Ecto-sp13_S_contig638.17140.1 ID=mRNA_Ecto-sp13_S_contig638.17140.1|Name=mRNA_Ecto-sp13_S_contig638.17140.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig638:16164..21985+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTGATTCTGGGTCGGCGAAAACTGTGTCTGTCGCCGTAGGGGCAGG
GCTTGCGGCTGCCGGCCTTGTCGTTGGACTCGCAGGCCCGAAGGTGGTCG
AGAAAATCCTCCTCAAATTGAAGCCCGGTGGAAAGTTCAGCGGGATGAAC
AAGCCAACGGCAGGGGCAAGGACGGTCAAGGAGCTGGACGTCGGCACCCA
CCCCCTACAGCTGTACTCGATGGCCACGCCGAACGGGCAGAAGGTCACCA
TCGCGCTGGAAGAGATGGGGCTCAAGTACGACGCTTGGTACACGAACATC
ATGTCGGGGGACCAATTCACGTCTGGCTTCGTCAAGGTCAACCCCAACTC
CAAGATCCCAGCCCTGGTGGACAACGACGCGCCGGGCGGCAAGCCCCTTC
ACCTCTTCGAGACCGGTAACATTCTCTTGTACCTCGCCGAGCGAAGCGGC
AAGTTCCTCCCGACAGACCCGGCGGCGAAGGCGGAGTGTCTCAACTGGCT
TTTCTTCAACGTCGGCGAGGCTCCGTACTTTGGACAGTTTGGCCACTTCA
CGAGATATGCTCCTGTCAAGCTCGACTACGCCGTCAACAGGTACTCGACT
GAGGTGCAGCGCGCGCTTGACGTGCTGGACAAGCAGCTCGAGGGGAAGAG
TTTCTTGTGTGGCGAGGAGTACACCATCGCGGACATGGCATGGCTTCCAT
GGGTCCGATGTTTGGAAATTTTTTACGAGGCCTACGACACGCTGGAGATG
TCGACCTACTCGAACGTGGCGGCGTGGCGCGAGAGGGTGGAGGCGCGACC
TGCAACAGCCAAGGGGTTGATCATCAACTCCGGTGCACAGAACGGGGCCT
TCAAGGAGTATCACTCCGCCTAA
back to top