mRNA_Ecto-sp13_S_contig638.17140.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: D7G2C3_ECTSI (Putative Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C3_ECTSI) HSP 1 Score: 581 bits (1497), Expect = 2.760e-207 Identity = 287/290 (98.97%), Postives = 289/290 (99.66%), Query Frame = 1
Query: 1 MSDSGSAKTVSVAVGAGLAAAGLVVGLAGPKVVEKILLKLKPGGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA 870
MSDSGSAKTVSVAVGAGLA AGLVVGLAGPKVVEKILLKLKPGGKFSGMNKPTAGARTVKEL+VGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEY+IADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA
Sbjct: 1 MSDSGSAKTVSVAVGAGLATAGLVVGLAGPKVVEKILLKLKPGGKFSGMNKPTAGARTVKELEVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYSIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA 290
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A835ZJ35_9STRA (Putative glutathione S-transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ35_9STRA) HSP 1 Score: 367 bits (942), Expect = 6.080e-123 Identity = 172/267 (64.42%), Postives = 210/267 (78.65%), Query Frame = 1
Query: 73 VGLAGPKVVEKILLKLKPGGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQ-NGAFKEYHSA 870
+G A P +V LKPGG F+G+N TAGART K+L VG H LQLYSMATPNGQKVTIALEEMGL+YDAWY IM DQFTSGFV VNPNSKIPA+VD D PGGKP++LFE+G+ILLYLAE+SGK LP DPA + ECLNWLFF VG APYFGQ+GHF RYAP+K+ Y ++RY+ E +R L VLD++L G++FL GEE TIAD+AW+PWV+CL +FY+ + L +S Y V W+E + +RPA AKG+ INS A+ N +KEYHS+
Sbjct: 24 LGAATPTLVSAAKQYLKPGGAFAGLNSATAGARTQKDLPVGQHALQLYSMATPNGQKVTIALEEMGLRYDAWYIGIMDQDQFTSGFVAVNPNSKIPAMVDKDGPGGKPVNLFESGSILLYLAEKSGKLLPKDPALRTECLNWLFFQVGAAPYFGQYGHFARYAPIKIKYGIDRYALETKRILSVLDQRLMGRTFLVGEELTIADLAWMPWVQCLSVFYKGDEPLGLSEYQEVMRWKENLLSRPAIAKGMRINSPAEENQQYKEYHSS 290
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: E8Z6K5_PFIPI (Glutathione S-transferase (Fragment) n=1 Tax=Pfiesteria piscicida TaxID=71001 RepID=E8Z6K5_PFIPI) HSP 1 Score: 315 bits (806), Expect = 6.290e-103 Identity = 151/247 (61.13%), Postives = 188/247 (76.11%), Query Frame = 1
Query: 145 MNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMG---LKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAER-SGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQL-EGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA 870
+NKPTAGAR +EL VG HP+QLYS+ATPNGQKVTI LEE+G +KYDA+ NIM+GDQFTSGFV VNPNSKIPA++D D PGGK + +FE+GNIL YLAE+ + LP+DPA + E NWL+F VG PYFGQFGHF +YA K+DYA+NRY E QR LDVLDK+L E ++L G Y+IAD+AW PWVRC++ Y A++ + + Y NV AW +++ ARPA KGL INS + NG +EYHSA
Sbjct: 2 INKPTAGAREERELPVGEHPIQLYSLATPNGQKVTILLEEIGEEKVKYDAYLINIMAGDQFTSGFVAVNPNSKIPAMIDRDGPGGKTVRVFESGNILQYLAEKYQSELLPSDPAERLEVFNWLYFQVGAGPYFGQFGHFYKYANEKIDYAINRYKMETQRLLDVLDKRLAETGAYLAGPNYSIADIAWFPWVRCIDTGYSAWEEIGVDEYKNVRAWFDKISARPAVEKGLRINSSSDNG-IREYHSA 247
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A7S4JSJ9_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JSJ9_9EUKA) HSP 1 Score: 310 bits (794), Expect = 1.030e-100 Identity = 145/251 (57.77%), Postives = 187/251 (74.50%), Query Frame = 1
Query: 115 KLKPGGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHS 867
K K FS +N+PTAGAR K+L G HP+QLYS+ATPNG KVT L E+GL +DA+ NIM G+QF SGFV +NPNSKIPALVD + P G+ +++FE+GNILLYLAE++G+F+P+DP + ECLNWLF +G PYFGQFGHF +YA K+ YA++RY+ E QR L VLD+ LEGK +L G+E TIAD AW+PWVRC+E Y A + + + Y NVAAW +R ARPA A+GL IN+ A + A+ YH+
Sbjct: 5 KKKESSAFSSINRPTAGAREQKDLPAGEHPIQLYSLATPNGIKVTTLLIELGLAFDAYKINIMKGEQFWSGFVDINPNSKIPALVDKNGPNGQSVNVFESGNILLYLAEKTGRFIPSDPVKRVECLNWLFHQMGAGPYFGQFGHFYKYANEKIPYAIDRYTMETQRLLSVLDQALEGKEWLVGDELTIADFAWIPWVRCIETGYNAKEHVGLDNYKNVAAWCDRWLARPAVAEGLKINAWAPD-AYANYHT 254
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A2R5GYV1_9STRA (Glutathione S-transferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYV1_9STRA) HSP 1 Score: 306 bits (783), Expect = 8.040e-99 Identity = 154/277 (55.60%), Postives = 194/277 (70.04%), Query Frame = 1
Query: 46 AGLAAAGLVVGLAGPKVVEKILLKLKPGGKF--SGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHSA 870
AG+A LV G+ + + K L G K SG N+ T+G R + L VG HPLQLYS TPNGQKVT+ALEEMGL YDA + +I GDQFTSGFV++NPNSKIPALVD + P GK + +FET +ILLYLAE+SGK +P DPA K E +NW+ + G APYFGQFGHFT+YA VKL Y + RYS E QR LDVLDKQLEGK ++ G EYT+AD+ +PW+ CL FY A +TLE+ +Y NV W R+++RPA G+ IN G + ++ Y S+
Sbjct: 19 AGVAGLALVAGMGIARPLYK-RLDYAAGVKLAHSGSNRATSGVREQRSLPVGKHPLQLYSAGTPNGQKVTVALEEMGLAYDAHFISI-GGDQFTSGFVEINPNSKIPALVDREGPNGKEIRVFETASILLYLAEKSGKLVPKDPAQKVEMMNWIMWLQGSAPYFGQFGHFTKYAKVKLGYPIERYSMEAQRLLDVLDKQLEGKDYILGSEYTLADINTMPWINCLSQFYNADETLELDSYKNVQKWMARIKSRPAVKLGMQIN-GFGDSKYRNYSSS 292
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A7S3PBB9_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3PBB9_9STRA) HSP 1 Score: 298 bits (762), Expect = 1.590e-95 Identity = 144/259 (55.60%), Postives = 185/259 (71.43%), Query Frame = 1
Query: 94 VVEKILLKLKPGGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQ-FGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHS 867
VV K+ ++ K GK+ +NKPTAGAR +L G HPLQL+S+ TPNGQKVTI LEE+G++YDAW NI G+QF+SGFV+ NPNSKIPAL+D P+ +FETG+ILLYLAE+ KF+P D AKAEC+NWLF+N+G AP+ G FGHF YAPV ++YA+NR+S E +R LDVLDK L +++ GEEYTIADMA PWV+CL+ Y A + L+ + Y NV W E +E RPA +GL +N +N E HS
Sbjct: 36 VVPKVWVEPKIEGKWGAINKPTAGARFEAKLPRGDHPLQLHSLGTPNGQKVTIMLEELGVEYDAWKVNIGKGEQFSSGFVEANPNSKIPALLDYSENSAVPVRVFETGSILLYLAEKYDKFVPKDSRAKAECMNWLFWNIGTAPFIGGGFGHFYHYAPVNIEYAINRFSMETKRILDVLDKHLAVNAYMAGEEYTIADMAIFPWVKCLDWGYNAAEFLQFNEYENVIRWIENIEERPAVKRGLKVNGWGEND-LPERHS 293
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A448ZIJ3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIJ3_9STRA) HSP 1 Score: 286 bits (731), Expect = 5.220e-91 Identity = 142/254 (55.91%), Postives = 178/254 (70.08%), Query Frame = 1
Query: 130 GKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAP-------GGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQ-FGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHS 867
G GMN+PTAG R EL G H LQLYS+ TPNGQKVTI LEE+G+ YDA+ NIM +QF S FV +NPNSKIPAL+D P +PL LFE+G+ILLYLAER KFLPTDP A+ ECLNWLF+ +G APY G FGHF +YAP+K++YA++R++ E +R +DVLDKQLE K ++CG EYTIADMA PW+RCL Y+ + L++ TY+NV W + RPA +GL +N G A +E HS
Sbjct: 29 GVMGGMNRPTAGKRFDSELPRGEHDLQLYSLGTPNGQKVTILLEELGVDYDAYTINIMQLEQFGSAFVDINPNSKIPALLDYAPPCESSXESEKEPLRLFESGSILLYLAEREKKFLPTDPRARTECLNWLFWQMGTAPYLGGGFGHFYKYAPLKIEYAIDRFAMEAKRIVDVLDKQLEQKDYVCGSEYTIADMAIYPWIRCLHTGYKGTEFLQLETYANVERWMATLAERPAVRRGLRVN-GFGEDAVRERHS 281
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A7S4A9V9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9V9_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.850e-89 Identity = 142/264 (53.79%), Postives = 181/264 (68.56%), Query Frame = 1
Query: 94 VVEKILLKLKPGGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPAL-----VDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQ-FGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHS 867
VV K + GG GMN+PTAG R EL G H LQLYS+ TPNGQKVTI LEE+G+ YDA++ +IM QF S FV +NPNSKIPAL VD D KPL +FE+G+ILLYLAER KF+PTD K EC+NWL + +G PY G FGHF +YAP+K++Y + R++ E +R +DVLDK LEGK ++CG+EYTIADMA PW+RCL+ Y A + L++ Y+NV W +EARPA +GL +N G + A +E HS
Sbjct: 22 VVAKQWVPKSLGGIVGGMNRPTAGKRFDSELPRGEHDLQLYSLGTPNGQKVTILLEELGVDYDAYFIDIMELQQFGSAFVDINPNSKIPALLDYSVVDVDDDSSKPLPVFESGSILLYLAEREKKFVPTDLRKKTECMNWLMWQMGTGPYLGGGFGHFYKYAPLKIEYGIERFTMETKRIVDVLDKNLEGKEYVCGDEYTIADMAIYPWIRCLDKGYGASEFLQLQEYTNVQRWIATLEARPAVQRGLRVN-GYEADAVRERHS 284
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A7Y7XWP8_9PSED (Glutathione-dependent disulfide-bond oxidoreductase n=16 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A7Y7XWP8_9PSED) HSP 1 Score: 277 bits (709), Expect = 1.040e-87 Identity = 142/280 (50.71%), Postives = 189/280 (67.50%), Query Frame = 1
Query: 127 GGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEM------GLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQ-FGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCLEI--FYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIIN--SGAQNGAFKEYHSA*QLVCRSLQCDLFEERVGALN 933
GGKF+ +N+P AGA KEL +G HPLQLYS+ATPNGQK+TI LEE+ G +YDAW I GDQF SGFV VNPNSKIPAL+D+ P KP+ +FE+G IL YLAE+ G FLPT+PAA+AECL+WLF+ +G APY G FGHF YAP K++YA++R++ E +R LDVLDK+L ++ G+EYTIADMA PW L YEA + L + Y +V W + ++ARPA +G ++N SG + +E H A R+ E+++ A++
Sbjct: 20 GGKFANINRPIAGATHDKELPIGRHPLQLYSLATPNGQKITILLEELLALGHQGAEYDAWLIRIGDGDQFGSGFVDVNPNSKIPALMDHSGP--KPIRIFESGAILQYLAEKFGAFLPTEPAARAECLSWLFWQMGSAPYLGGGFGHFYAYAPTKIEYAIDRFAMETKRQLDVLDKRLAVSEYIAGDEYTIADMAIWPWYGGLAKGRLYEAAEFLSVQDYRHVQRWADAIDARPAVQRGRMVNRVSGEPSSQLRERHDASDFATRT------EDKLAAVS 291
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Match: A0A0X8EX79_PSEFR (Glutathione-dependent disulfide-bond oxidoreductase n=8 Tax=Pseudomonas TaxID=286 RepID=A0A0X8EX79_PSEFR) HSP 1 Score: 276 bits (707), Expect = 1.400e-87 Identity = 144/266 (54.14%), Postives = 183/266 (68.80%), Query Frame = 1
Query: 127 GGKFSGMNKPTAGARTVKELDVGTHPLQLYSMATPNGQKVTIALEEM------GLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQ-FGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYTIADMAWLPWVRCL--EIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIIN--SGAQNGAFKEYHSA*QLVCRS 891
GG F+ +N+P AGA KEL VG HPLQLYS+ATPNGQKVTI LEE+ G +YDAW I GDQF+SGFV VNPNSKIPAL+D+ P KP+ +FE+G ILLYLAE+ G F+PT+PAA+AECL+WLF+ +G APY G FGHF YAP+K++YA++R++ EV+R LDVLDKQL ++ G++YTIAD+A PW L YEA L + Y +V W + VEARPA +G +N SG + E H A + RS
Sbjct: 17 GGTFASINRPVAGATHDKELPVGRHPLQLYSLATPNGQKVTILLEELLALGHQGAEYDAWLIKIGEGDQFSSGFVAVNPNSKIPALMDHSGP--KPVRIFESGAILLYLAEKFGAFVPTEPAARAECLSWLFWQMGSAPYLGGGFGHFYAYAPIKIEYAIDRFAMEVKRQLDVLDKQLAVNEYVAGDQYTIADIAIWPWYGGLLKGRLYEAAQFLSVQDYKHVQRWADAVEARPAVQRGRRVNRISGDPSQQLPERHDASDIDARS 280 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig638.17140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig638.17140.1 >prot_Ecto-sp13_S_contig638.17140.1 ID=prot_Ecto-sp13_S_contig638.17140.1|Name=mRNA_Ecto-sp13_S_contig638.17140.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp MSDSGSAKTVSVAVGAGLAAAGLVVGLAGPKVVEKILLKLKPGGKFSGMNback to top mRNA from alignment at Ecto-sp13_S_contig638:16164..21985+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig638.17140.1 ID=mRNA_Ecto-sp13_S_contig638.17140.1|Name=mRNA_Ecto-sp13_S_contig638.17140.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig638:16164..21985+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig638:16164..21985+ >mRNA_Ecto-sp13_S_contig638.17140.1 ID=mRNA_Ecto-sp13_S_contig638.17140.1|Name=mRNA_Ecto-sp13_S_contig638.17140.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig638:16164..21985+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |