mRNA_Ecto-sp13_S_contig6377.17135.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE) HSP 1 Score: 1077 bits (2785), Expect = 0.000e+0 Identity = 714/948 (75.32%), Postives = 746/948 (78.69%), Query Frame = 1
Query: 1 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAERRSRRAGAGDASFVINPDGTRTYSKVSVSTTPTAPTPTMT-----ASRLRPPPGMESFPELGGPDDGDDLLDSLLGLEVSGAPTAIAAPATAGSDSGFGSSGDVSGGTMKTKSFSAAXXXXXXXXXXXPAADSATFDGDGD--SMLDALLGLKIGPTMAEDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGSHPASHSPAAAPAGTTATTPARATRSEHQV--HPSRPAPGEGVGSKVDPSGMRMGGGRGSGGEAALVHSKDRGGXXXXXXXXXXXXXXXXXXLYWLLQGARDDAVARGNFDEPGGGPAGEARTTSTGGTEPSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPAAPACPSREQHRSEVGAGRALFGGFVPRTHAPAASLYDFGGKDQGAGSEQGGGETGGDGGFAGVSSLPSIYNQGGGRGLVQAGGGGVLETLDDARVRQYTQEATARAQRLGAEKRSSRITKSKRQG 2817
GTPLAVAG+EDSEIH TIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVN+TSES GK NSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQE SRFGHFGLGLS YTHFTSPIRRYADIVVHRLLLASLGVSVT+ASNATHH TKPPPRLLSGDGFN PAAKRE+VDEGV+ALPSSLAPSVMEMEE+A +E DAAAERRSR AGAGDASFVINPDGTRT+ ASRL PPPGMESFPELGGPDDGDDLLDSLLGLEVS + TA AAPA AGSDSGFGSSGDVSGGTMKTKS XXXXXXXXXXX S+LD+LLGL+IGPT A GGEATPGE+DQDDITAHGGGG D GEAFSPSARD+VV SPPFGGAELGRLCTHLNDRNRRAKR+AQRCQEMFLRL+FKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDR+G VQVDPALLGL AGAGNPPSKAFATL ACRA+PGAGVSLVSTP AGKSNAVSA KAGRGGGP RDGEGEEDEEVLEVRPPPGGGGKVLRLRVLD VSL+ ++ Q R + G P++ AAP A++S V A GE + D G + GG +V ++ XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX G C + RSEVGAGRALFGGFVPR HAPAASLYDFGGK QGAGSEQGGGETGGDGGFAGVSSLPSIYNQ GRGLV AGGGGVLETLDDARVRQYTQEAT RAQRLGAEKRSSRITKSKRQG
Sbjct: 378 GTPLAVAGQEDSEIHDTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEGSRFGHFGLGLSLYTHFTSPIRRYADIVVHRLLLASLGVSVTRASNATHHITKPPPRLLSGDGFNVHPAAKREEVDEGVIALPSSLAPSVMEMEESADVNLETDAAAERRSRSAGAGDASFVINPDGTRTHXXXXXXXXXXXXXXXXXXXXXXASRLPPPPGMESFPELGGPDDGDDLLDSLLGLEVSRSTTAKAAPAPAGSDSGFGSSGDVSGGTMKTKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLDSLLGLEIGPTTARHGGEATPGEQDQDDITAHGGGGGDAGEAFSPSARDNVVTASPPFGGAELGRLCTHLNDRNRRAKRLAQRCQEMFLRLYFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDRDGQVQVDPALLGLSAGAGNPPSKAFATLQACRALPGAGVSLVSTPRAGKSNAVSANCKAGRGGGPGRDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDSVSLQGDRKICAEQNE----RAIECG----PSTRCTRAAPCQEVVL----ASKSIQMVCGWEVGKAWGERGAAVRDCCGPKRAGGHRMDEGGKVVAEEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXEGMDFTGCS--KARRSEVGAGRALFGGFVPRRHAPAASLYDFGGKGQGAGSEQGGGETGGDGGFAGVSSLPSIYNQVVGRGLVPAGGGGVLETLDDARVRQYTQEATTRAQRLGAEKRSSRITKSKRQG 1311
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: D8LN42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN42_ECTSI) HSP 1 Score: 641 bits (1653), Expect = 2.650e-221 Identity = 375/553 (67.81%), Postives = 380/553 (68.72%), Query Frame = 1
Query: 1162 MLDALLGLKIGPTMAEDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGSHPASHSPAAAPAGTTATTP-ARATRSEHQVHPSRPAPGEGVGSKVDPSGMRMGGGRGSGGEAALVHSKDRGGXXXXXXXXXXXXXXXXXXLYWLLQGARDDAVARGNFDEPGGGPAGEARTTSTGGTEPSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPAAPACPSREQHRSEVGAGRALFGGFVPRTHAPAASLYDFGGKDQGAGSEQGGGETGGDGGFAGVSSLPSIYNQGGGRGLVQAGGGGVLETLDDARVRQYTQEATARAQRLGAEKRSSRITKSKRQG 2817
MLDALLGL+IGPT A DGGEATPGEEDQDDITAHGGGG DTGEAFS SARDDVVADSPPFGGAELGRLCTHLNDRNRRAKR+AQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDR+G VQVDPALLGLPAGAGNPPSKAFATLPACRA+PGAGVSLVSTPPAGKSNAVSAYYKAG G RDGEG EDEEVLEVRPP GGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVG+HPASHSPAAAP GTTATT AR TR EHQ RSEVGAGRALFGGFVPR HAPAASLYDFGGK QGAGSEQGGGETG DGGFAGVSSLPSIYNQGGGRGLV AGGGGVLETLDDARVRQYTQEAT RAQRLGAEKRSSRITKSKRQG
Sbjct: 1 MLDALLGLEIGPTTARDGGEATPGEEDQDDITAHGGGGGDTGEAFSMSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDRDGQVQVDPALLGLPAGAGNPPSKAFATLPACRALPGAGVSLVSTPPAGKSNAVSAYYKAGGGXXXGRDGEGGEDEEVLEVRPPRGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGNHPASHSPAAAPTGTTATTTSARGTRLEHQ-------------------------------------------------------------------------------------------------------------------------------------------------------RSEVGAGRALFGGFVPRRHAPAASLYDFGGKGQGAGSEQGGGETGRDGGFAGVSSLPSIYNQGGGRGLVPAGGGGVLETLDDARVRQYTQEATTRAQRLGAEKRSSRITKSKRQG 402
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: D8LN43_ECTSI (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN43_ECTSI) HSP 1 Score: 490 bits (1262), Expect = 5.720e-153 Identity = 265/277 (95.67%), Postives = 267/277 (96.39%), Query Frame = 1
Query: 1 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAERRSRRAGAGDASFVINPDGTRTYSKVS 831
GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVN+TSES GK NSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRL SGDGFNAPPAA R D DEGV+ALPSSLAPSVMEMEEAAVG VE DAAAERR RRAGAGDASFVINPDGTRTYSK S
Sbjct: 784 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLPSGDGFNAPPAANRGDDDEGVLALPSSLAPSVMEMEEAAVGMVEADAAAERRPRRAGAGDASFVINPDGTRTYSKAS 1060
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A7S4R116_9STRA (DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R116_9STRA) HSP 1 Score: 191 bits (484), Expect = 2.860e-46 Identity = 187/652 (28.68%), Postives = 270/652 (41.41%), Query Frame = 1
Query: 1 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFG--HFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGD-GFNAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAERRSRRAGAGDASFVINPDGTRTYSKVSVSTTPTAPTPTMTASRLRPPPGMESFPELGGPDD--GDDLLDSLLGLEVSGAPTAIAAPATAGSDSGFGSSGDVSGGTMKTKSFSAAXXXXXXXXXXXPAADSATFDGDGDSMLDALLGLKIGPTMAEDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGSHP 1941
G P V K + EIHHTIAELMI+AN VA KI G FPS +L+R H + + +R E GV+ G+SN + L++SL + G+ G L +SLA RAMSEA+YV TG+ +E+ G H+GLG+ YTHFTSPIRRYAD+VVHRLLLA+ VT+ +A R+ S D G N + ++P S A SV+ AGD G+E + D+ GDDLLD LL S G GD D DG + LD T A+D + T G+ ++H A++ P+ AE+ ++C +N +NR +K + CQ +FL L+F+ ++ V +V+ LR+NG + YVP +D KGPV++SD++G+VQ+ P+++GLP+ AG PP+ FA + C+ P + + +E + L+V P G R+LD + ++LSC+ AR+P R L G P
Sbjct: 374 GLPTKVVAKTEMEIHHTIAELMIMANGHVASKIHGHFPSSSLLRNHRTVEQNRFEDLESAFKAGGVSFD----GRSNMA---LAESLRQA-----KASGKDGAVIDSLFQSLATRAMSEAQYVCTGS--------------KEASVGLSHYGLGIEKYTHFTSPIRRYADVVVHRLLLAA----VTKKDDADV-------RMASLDVGVNR----------NALESIPDSAAMSVL------------------------AGD--------------------------------------GLEGGEQKEQSDELEGDDLLDFLLE-----------------ETSQLGLDGD---------------------------------DDDGSNKLDE--------TKADDETKETDGK------SSH--------------------AEADPYSTAEVTKICEGINHQNRISKLCSMSCQRLFLSLYFRGNTDVAPAVVIGLRANGLLVYVPKYDMKGPVFLSDKDGNVQIHPSVMGLPSKAGLPPTSGFAIVDGCKRFPDGSCDICNAD--------------------------DEANKYLQVIVPAGSSSVHCDFRLLDVIEVQLSCDTSDVVARIPPTRLHLISKGKKP 806
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A7S3DYM8_9STRA (DIS3-like exonuclease 1 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DYM8_9STRA) HSP 1 Score: 160 bits (406), Expect = 3.300e-37 Identity = 205/653 (31.39%), Postives = 272/653 (41.65%), Query Frame = 1
Query: 1 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAERRSRRAGAGDASFVINPDGTRTYSKVSVSTTPTAPTPTMTASRLRPPPGMESFPELGGPDDGDDLLDSLLGLEVSGAPTAIAAPATAGSDSGFGSSGDVSGGTMKTKSFSAAXXXXXXXXXXXPAADSATFDGDGDSMLDALLGLKIG-----PTMAEDGGEATPGEEDQDDITAHGG------GGSDTGEAFSPSA--RDDVVADSPPFGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLL 1920
G P+AV K+D EIHHTIAELMI AN++VA KI FP AL+R+H R FE + + N + GK+N L+ SL E ++ A L +SLA RAMSEA YVSTG + +E H+GLGL++YTHFTSPIRRYAD VVH L+ASL V + S T KP AK + + + LP S S++ AE +S R DA DG + + T EL D D +D L+G GA + T ++ S XXXXXXXXXXX ++ L L + P E PG ++ T GG + E SP + D + PF G ++ +C LN NR AK+ + CQ +FL LFFK++ + +V +LR NGF+AY+P FD + PVY+ D +G VQ+DP LLGL AG P+ FA CR +L T EGE+ E + P L LR LD V + + C +AR+P R L
Sbjct: 36 GKPVAVKPKQDLEIHHTIAELMIWANTSVATKIYERFPGSALLRIHQEVGEDR---FEDLREMLSAGNL-QLEGKTNME---LADSLKKAENKSI-------PVVASLFRSLATRAMSEALYVSTG------------DTKEGQNLSHYGLGLTYYTHFTSPIRRYADCVVHFQLMASL---VEKESG----TQKP---------------AKHQALPQ----LPDSTVISML---------------AEGQSDRF---DALTRSGDDGGDEVMHDDIKKSNTD--------------------ELLSVDMADLEIDDLIG----GAADLLVDGDTNQPENEIDSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTELKEEPSLSVSKWQAAPPDIEGDLSTAPGSREKKSHTTKGGYTISVPAVKEKNETESPDLHIKGDELNKIEPFFGHQVSTICDRLNLHNRLAKKCSFDCQGLFLSLFFKENLVSTEAVVSNLRENGFVAYIPRFDLRVPVYLRDSDGFVQIDPVLLGLEKTAGEDPTVGFAWSRCCRRFGPEDAALSLT-------------------------EGEKLEVLTRTIPK-------LTLRPLDVVQVEIYCSEWDQRARIPSPRVHL 562
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A448Z1J3_9STRA (DIS3-like exonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1J3_9STRA) HSP 1 Score: 150 bits (379), Expect = 3.020e-33 Identity = 167/649 (25.73%), Postives = 244/649 (37.60%), Query Frame = 1
Query: 7 PLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGV--AAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGF--NAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAERRSRRAGAGDASFVINPDGTRTYSKVSVSTTPTAPTPTMTASRLRPPPGMESFPELGGPDDGDDLLDSLLGLEVSGAPTAIAAPATAGSDSGFGSSGDVSGGTMKTKSFSAAXXXXXXXXXXXPAADSATFDGDGDSMLDALLGLKIGPTMAEDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGSHP 1941
P+ V K+ EIH T+AELMI+ANS VA+ I FP+ AL+R+H S D SR + + A K+ + +S + L+ SL E L +SLA RAMSEA+YVSTG + Q H+GLGL YTHFTSPIRRYAD+VVH LL +L L D F APP R+ + +LP S S+++ E ++ A +R+ A +S N D + K S D L++ L +G + G+A++ ++ ++C LN +NR AK + CQ +FL L+FKDH ++ Q +V +LRSNGF AY+P FD + P+Y+SDR+G VQ+DPALLGL +G P+ FAT + R P +L + E + +R K ++ +LD V++++ C+ T++R+P+ R L S P
Sbjct: 745 PVQVIPKKQLEIHQTVAELMIMANSWVAKTIFERFPTSALLRIHQSVDESRFEDLKDILDAGKISFDGSSNMK---------LADSLKKAEKSCKTNSAVNS-----LFQSLATRAMSEAQYVSTGQIGGEQG------------LSHYGLGLGKYTHFTSPIRRYADVVVHHQLLQTL--------------------TLKXDDFPLRAPPGFGRK----ALKSLPESKTISIIQGE-------GIEDAKDRKK----ASTSSVTKNIDSPSSTGKAS-----------------------------------DILVEYFSRLTTAG---------------------------------------------------------------------------------------------------KELGDAYT---------------NEKVSKICQTLNRQNRMAKLSSFECQGLFLSLYFKDHVEITQAVVTNLRSNGFWAYIPKFDFRAPIYLSDRDGVVQIDPALLGLKKTSGLDPTTGFATSKSTRRFPSGTCTLHDSL--------------------------EHSHLEVSLRETT----KTYKITILDVVTVKIFCDEWDTKSRVPRPRIHLIADSSEP 1153
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A836CJZ0_9STRA (DIS3-like exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ0_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.470e-32 Identity = 96/181 (53.04%), Postives = 112/181 (61.88%), Query Frame = 1
Query: 1 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGV 543
G P+AV K + EI+HTIAELMILAN VAE + AFPS AL+R HA SRL + VAA G++ S G L SL + A RG G G LLKSLA R MSEA YV TGTL +H A G G+ + R HFGLG+ YTHFTSPIRRYAD+VVHRLLLA+ G+
Sbjct: 306 GLPVAVTAKAELEINHTIAELMILANRTVAETVLRAFPSAALLRTHAPVQASRLGLLQEVAAAAGIS-------VEVGSGGALQASLERSQ--AARGAGVGA-----LLKSLATRVMSEAVYVCTGTLDEHSAGG-GVTGE---RLSHFGLGIGSYTHFTSPIRRYADVVVHRLLLAATGL 468
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: M4BN87_HYAAE (DIS3-like exonuclease 1 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN87_HYAAE) HSP 1 Score: 124 bits (312), Expect = 3.190e-25 Identity = 103/236 (43.64%), Postives = 128/236 (54.24%), Query Frame = 1
Query: 25 KEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGV-----NNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKA-GLLKSLAVRAMSEAEYVSTGTL-SDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEE 711
KE+ EIH TIAELMI ANS VA ++ FP+ AL+R H+ P R T +A GV NN + L QSL E + + SKA LLKSLAVR M+EAEYVS+G + + A G + + F H+GLGL +YTHFTSPIRRYAD++VHR LLAS+ ASNA+ T P S D +AP + LP SLAPSV+E E
Sbjct: 793 KENLEIHGTIAELMIFANSTVARRLVEHFPTHALLRRHSPPSGDRFTQLVQLANARGVVIDATNNFT------------LQQSLTAAE------RSDRMDSKAISLLKSLAVRVMTEAEYVSSGAVVAGDTATANG----DVTPFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLASIA-----ASNASPSTIFQP----SVDKASAP------------LLLPKSLAPSVLESAE 985
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A7S1Z5Q1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z5Q1_TRICV) HSP 1 Score: 117 bits (294), Expect = 4.560e-25 Identity = 83/256 (32.42%), Postives = 121/256 (47.27%), Query Frame = 1
Query: 1171 ALLGLKIGPTMA--EDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPP----FGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLL 1920
AL L TM+ E+GG G+ D I + G SD + AR +++ + ++ ++C LN + R AK + CQ +FL L+F+D +V +V+ +R NG + YVP FD KGPV++ D++G VQVDP++LGLPAG F L CR P L +DG+ EED + + P G + R LD VS++LSC+ T AR+P R L
Sbjct: 20 ALESLPASQTMSVLEEGGPDGTGDGINDAIGSMIEGTSDVSIEVNDGARGPRISEESGTAHFYKTGQVAKICVRLNYQTRMAKLSSMDCQRLFLSLYFRDQVEVAPAVVVGVRLNGLLVYVPKFDLKGPVFLCDKDGRVQVDPSILGLPAGVXXXXXXXFTALDGCRMFPDGKCIL-------------------------QDGDKEEDRRLTVMVP---GSSRPCVFRPLDVVSVQLSCDTSDTVARIPPPRLHL 247
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A6A3KMS3_9STRA (DIS3-like exonuclease 1 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KMS3_9STRA) HSP 1 Score: 124 bits (310), Expect = 5.520e-25 Identity = 96/231 (41.56%), Postives = 120/231 (51.95%), Query Frame = 1
Query: 25 KEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAK--VGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEE 711
KE EIH TIAELMI ANS VA K+ FP+ AL+R H P R T +A V ++ T+ L QSLA E G LLKSLAVR M+EAEYVS+G ++ A + +RF H+GLGL +YTHFTSPIRRYAD++VHR LLA++ T PP L P+AK + LP +LAPSV+E E+
Sbjct: 795 KESLEIHGTIAELMIFANSTVARKLVERFPTHALLRRHPPPSGDRFTQLVQLAKARDVVIDATNNFT---------LQQSLAAAE-----RSGRMDSKTMSLLKSLAVRVMTEAEYVSSGAVAAVDAASSNGDV---TRFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLAAIA-----------SPTLPPSSALQR------PSAKTS----ASLVLPKTLAPSVLESED 987 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6377.17135.1 >prot_Ecto-sp13_S_contig6377.17135.1 ID=prot_Ecto-sp13_S_contig6377.17135.1|Name=mRNA_Ecto-sp13_S_contig6377.17135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=940bp GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDback to top mRNA from alignment at Ecto-sp13_S_contig6377:711..7771+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6377.17135.1 ID=mRNA_Ecto-sp13_S_contig6377.17135.1|Name=mRNA_Ecto-sp13_S_contig6377.17135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7061bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6377:711..7771+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6377:711..7771+ >mRNA_Ecto-sp13_S_contig6377.17135.1 ID=mRNA_Ecto-sp13_S_contig6377.17135.1|Name=mRNA_Ecto-sp13_S_contig6377.17135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2820bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6377:711..7771+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |