prot_Ecto-sp13_S_contig6377.17135.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6377.17135.1
Unique Nameprot_Ecto-sp13_S_contig6377.17135.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length940
Homology
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE)

HSP 1 Score: 1077 bits (2785), Expect = 0.000e+0
Identity = 714/948 (75.32%), Postives = 746/948 (78.69%), Query Frame = 0
Query:    1 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAERRSRRAGAGDASFVINPDGTRTYSKVSVSTTPTAPTPTMT-----ASRLRPPPGMESFPELGGPDDGDDLLDSLLGLEVSGAPTAIAAPATAGSDSGFGSSGDVSGGTMKTKSFSAAXXXXXXXXXXXPAADSATFDGDGD--SMLDALLGLKIGPTMAEDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGSHPASHSPAAAPAGTTATTPARATRSEHQV--HPSRPAPGEGVGSKVDPSGMRMGGGRGSGGEAALVHSKDRGGXXXXXXXXXXXXXXXXXXLYWLLQGARDDAVARGNFDEPGGGPAGEARTTSTGGTEPSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPAAPACPSREQHRSEVGAGRALFGGFVPRTHAPAASLYDFGGKDQGAGSEQGGGETGGDGGFAGVSSLPSIYNQGGGRGLVQAGGGGVLETLDDARVRQYTQEATARAQRLGAEKRSSRITKSKRQG 939
            GTPLAVAG+EDSEIH TIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVN+TSES GK NSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQE SRFGHFGLGLS YTHFTSPIRRYADIVVHRLLLASLGVSVT+ASNATHH TKPPPRLLSGDGFN  PAAKRE+VDEGV+ALPSSLAPSVMEMEE+A   +E DAAAERRSR AGAGDASFVINPDGTRT+                      ASRL PPPGMESFPELGGPDDGDDLLDSLLGLEVS + TA AAPA AGSDSGFGSSGDVSGGTMKTKS    XXXXXXXXXXX               S+LD+LLGL+IGPT A  GGEATPGE+DQDDITAHGGGG D GEAFSPSARD+VV  SPPFGGAELGRLCTHLNDRNRRAKR+AQRCQEMFLRL+FKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDR+G VQVDPALLGL AGAGNPPSKAFATL ACRA+PGAGVSLVSTP AGKSNAVSA  KAGRGGGP RDGEGEEDEEVLEVRPPPGGGGKVLRLRVLD VSL+   ++   Q      R +  G    P++    AAP          A++S   V       A GE   +  D  G +  GG        +V  ++   XXXXXXXXXXXXXXXXXX                                          XXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXX G     C   +  RSEVGAGRALFGGFVPR HAPAASLYDFGGK QGAGSEQGGGETGGDGGFAGVSSLPSIYNQ  GRGLV AGGGGVLETLDDARVRQYTQEAT RAQRLGAEKRSSRITKSKRQG
Sbjct:  378 GTPLAVAGQEDSEIHDTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEGSRFGHFGLGLSLYTHFTSPIRRYADIVVHRLLLASLGVSVTRASNATHHITKPPPRLLSGDGFNVHPAAKREEVDEGVIALPSSLAPSVMEMEESADVNLETDAAAERRSRSAGAGDASFVINPDGTRTHXXXXXXXXXXXXXXXXXXXXXXASRLPPPPGMESFPELGGPDDGDDLLDSLLGLEVSRSTTAKAAPAPAGSDSGFGSSGDVSGGTMKTKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLDSLLGLEIGPTTARHGGEATPGEQDQDDITAHGGGGGDAGEAFSPSARDNVVTASPPFGGAELGRLCTHLNDRNRRAKRLAQRCQEMFLRLYFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDRDGQVQVDPALLGLSAGAGNPPSKAFATLQACRALPGAGVSLVSTPRAGKSNAVSANCKAGRGGGPGRDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDSVSLQGDRKICAEQNE----RAIECG----PSTRCTRAAPCQEVVL----ASKSIQMVCGWEVGKAWGERGAAVRDCCGPKRAGGHRMDEGGKVVAEEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXXXXXXEGMDFTGCS--KARRSEVGAGRALFGGFVPRRHAPAASLYDFGGKGQGAGSEQGGGETGGDGGFAGVSSLPSIYNQVVGRGLVPAGGGGVLETLDDARVRQYTQEATTRAQRLGAEKRSSRITKSKRQG 1311          
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: D8LN42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN42_ECTSI)

HSP 1 Score: 641 bits (1653), Expect = 2.650e-221
Identity = 375/553 (67.81%), Postives = 380/553 (68.72%), Query Frame = 0
Query:  388 MLDALLGLKIGPTMAEDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGSHPASHSPAAAPAGTTATTP-ARATRSEHQVHPSRPAPGEGVGSKVDPSGMRMGGGRGSGGEAALVHSKDRGGXXXXXXXXXXXXXXXXXXLYWLLQGARDDAVARGNFDEPGGGPAGEARTTSTGGTEPSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPAAPACPSREQHRSEVGAGRALFGGFVPRTHAPAASLYDFGGKDQGAGSEQGGGETGGDGGFAGVSSLPSIYNQGGGRGLVQAGGGGVLETLDDARVRQYTQEATARAQRLGAEKRSSRITKSKRQG 939
            MLDALLGL+IGPT A DGGEATPGEEDQDDITAHGGGG DTGEAFS SARDDVVADSPPFGGAELGRLCTHLNDRNRRAKR+AQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDR+G VQVDPALLGLPAGAGNPPSKAFATLPACRA+PGAGVSLVSTPPAGKSNAVSAYYKAG G    RDGEG EDEEVLEVRPP GGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVG+HPASHSPAAAP GTTATT  AR TR EHQ                                                                                                                                                       RSEVGAGRALFGGFVPR HAPAASLYDFGGK QGAGSEQGGGETG DGGFAGVSSLPSIYNQGGGRGLV AGGGGVLETLDDARVRQYTQEAT RAQRLGAEKRSSRITKSKRQG
Sbjct:    1 MLDALLGLEIGPTTARDGGEATPGEEDQDDITAHGGGGGDTGEAFSMSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRLAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDRDGQVQVDPALLGLPAGAGNPPSKAFATLPACRALPGAGVSLVSTPPAGKSNAVSAYYKAGGGXXXGRDGEGGEDEEVLEVRPPRGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGNHPASHSPAAAPTGTTATTTSARGTRLEHQ-------------------------------------------------------------------------------------------------------------------------------------------------------RSEVGAGRALFGGFVPRRHAPAASLYDFGGKGQGAGSEQGGGETGRDGGFAGVSSLPSIYNQGGGRGLVPAGGGGVLETLDDARVRQYTQEATTRAQRLGAEKRSSRITKSKRQG 402          
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: D8LN43_ECTSI (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN43_ECTSI)

HSP 1 Score: 490 bits (1262), Expect = 5.720e-153
Identity = 265/277 (95.67%), Postives = 267/277 (96.39%), Query Frame = 0
Query:    1 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAERRSRRAGAGDASFVINPDGTRTYSKVS 277
            GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVN+TSES GK NSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRL SGDGFNAPPAA R D DEGV+ALPSSLAPSVMEMEEAAVG VE DAAAERR RRAGAGDASFVINPDGTRTYSK S
Sbjct:  784 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNSTSESSGKPNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLPSGDGFNAPPAANRGDDDEGVLALPSSLAPSVMEMEEAAVGMVEADAAAERRPRRAGAGDASFVINPDGTRTYSKAS 1060          
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A7S4R116_9STRA (DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R116_9STRA)

HSP 1 Score: 191 bits (484), Expect = 2.860e-46
Identity = 187/652 (28.68%), Postives = 270/652 (41.41%), Query Frame = 0
Query:    1 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFG--HFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGD-GFNAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAERRSRRAGAGDASFVINPDGTRTYSKVSVSTTPTAPTPTMTASRLRPPPGMESFPELGGPDD--GDDLLDSLLGLEVSGAPTAIAAPATAGSDSGFGSSGDVSGGTMKTKSFSAAXXXXXXXXXXXPAADSATFDGDGDSMLDALLGLKIGPTMAEDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGSHP 647
            G P  V  K + EIHHTIAELMI+AN  VA KI G FPS +L+R H + + +R    E      GV+      G+SN +   L++SL        +  G+ G     L +SLA RAMSEA+YV TG+              +E+  G  H+GLG+  YTHFTSPIRRYAD+VVHRLLLA+    VT+  +A         R+ S D G N             + ++P S A SV+                        AGD                                      G+E   +    D+  GDDLLD LL                    S  G  GD                                 D DG + LD         T A+D  + T G+      ++H                    A++ P+  AE+ ++C  +N +NR +K  +  CQ +FL L+F+ ++ V   +V+ LR+NG + YVP +D KGPV++SD++G+VQ+ P+++GLP+ AG PP+  FA +  C+  P     + +                            +E  + L+V  P G        R+LD + ++LSC+     AR+P  R  L   G  P
Sbjct:  374 GLPTKVVAKTEMEIHHTIAELMIMANGHVASKIHGHFPSSSLLRNHRTVEQNRFEDLESAFKAGGVSFD----GRSNMA---LAESLRQA-----KASGKDGAVIDSLFQSLATRAMSEAQYVCTGS--------------KEASVGLSHYGLGIEKYTHFTSPIRRYADVVVHRLLLAA----VTKKDDADV-------RMASLDVGVNR----------NALESIPDSAAMSVL------------------------AGD--------------------------------------GLEGGEQKEQSDELEGDDLLDFLLE-----------------ETSQLGLDGD---------------------------------DDDGSNKLDE--------TKADDETKETDGK------SSH--------------------AEADPYSTAEVTKICEGINHQNRISKLCSMSCQRLFLSLYFRGNTDVAPAVVIGLRANGLLVYVPKYDMKGPVFLSDKDGNVQIHPSVMGLPSKAGLPPTSGFAIVDGCKRFPDGSCDICNAD--------------------------DEANKYLQVIVPAGSSSVHCDFRLLDVIEVQLSCDTSDVVARIPPTRLHLISKGKKP 806          
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A7S3DYM8_9STRA (DIS3-like exonuclease 1 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DYM8_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.300e-37
Identity = 205/653 (31.39%), Postives = 272/653 (41.65%), Query Frame = 0
Query:    1 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAERRSRRAGAGDASFVINPDGTRTYSKVSVSTTPTAPTPTMTASRLRPPPGMESFPELGGPDDGDDLLDSLLGLEVSGAPTAIAAPATAGSDSGFGSSGDVSGGTMKTKSFSAAXXXXXXXXXXXPAADSATFDGDGDSMLDALLGLKIG-----PTMAEDGGEATPGEEDQDDITAHGG------GGSDTGEAFSPSA--RDDVVADSPPFGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLL 640
            G P+AV  K+D EIHHTIAELMI AN++VA KI   FP  AL+R+H      R   FE +   +   N  +  GK+N     L+ SL   E  ++          A L +SLA RAMSEA YVSTG            + +E     H+GLGL++YTHFTSPIRRYAD VVH  L+ASL   V + S     T KP               AK + + +    LP S   S++               AE +S R    DA      DG        +  + T                     EL   D  D  +D L+G    GA   +    T   ++   S                 XXXXXXXXXXX            ++ L     L +      P   E      PG  ++   T  GG         +  E  SP    + D +    PF G ++  +C  LN  NR AK+ +  CQ +FL LFFK++    + +V +LR NGF+AY+P FD + PVY+ D +G VQ+DP LLGL   AG  P+  FA    CR       +L  T                         EGE+ E +    P        L LR LD V + + C     +AR+P  R  L
Sbjct:   36 GKPVAVKPKQDLEIHHTIAELMIWANTSVATKIYERFPGSALLRIHQEVGEDR---FEDLREMLSAGNL-QLEGKTNME---LADSLKKAENKSI-------PVVASLFRSLATRAMSEALYVSTG------------DTKEGQNLSHYGLGLTYYTHFTSPIRRYADCVVHFQLMASL---VEKESG----TQKP---------------AKHQALPQ----LPDSTVISML---------------AEGQSDRF---DALTRSGDDGGDEVMHDDIKKSNTD--------------------ELLSVDMADLEIDDLIG----GAADLLVDGDTNQPENEIDSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTELKEEPSLSVSKWQAAPPDIEGDLSTAPGSREKKSHTTKGGYTISVPAVKEKNETESPDLHIKGDELNKIEPFFGHQVSTICDRLNLHNRLAKKCSFDCQGLFLSLFFKENLVSTEAVVSNLRENGFVAYIPRFDLRVPVYLRDSDGFVQIDPVLLGLEKTAGEDPTVGFAWSRCCRRFGPEDAALSLT-------------------------EGEKLEVLTRTIPK-------LTLRPLDVVQVEIYCSEWDQRARIPSPRVHL 562          
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A448Z1J3_9STRA (DIS3-like exonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1J3_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.020e-33
Identity = 167/649 (25.73%), Postives = 244/649 (37.60%), Query Frame = 0
Query:    3 PLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGV--AAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGF--NAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAERRSRRAGAGDASFVINPDGTRTYSKVSVSTTPTAPTPTMTASRLRPPPGMESFPELGGPDDGDDLLDSLLGLEVSGAPTAIAAPATAGSDSGFGSSGDVSGGTMKTKSFSAAXXXXXXXXXXXPAADSATFDGDGDSMLDALLGLKIGPTMAEDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPPFGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGSHP 647
            P+ V  K+  EIH T+AELMI+ANS VA+ I   FP+ AL+R+H S D SR    + +  A K+  + +S  +         L+ SL   E                L +SLA RAMSEA+YVSTG +   Q               H+GLGL  YTHFTSPIRRYAD+VVH  LL +L                     L  D F   APP   R+     + +LP S   S+++ E        ++ A +R+     A  +S   N D   +  K S                                   D L++    L  +G                                                                                                    + G+A++                 ++ ++C  LN +NR AK  +  CQ +FL L+FKDH ++ Q +V +LRSNGF AY+P FD + P+Y+SDR+G VQ+DPALLGL   +G  P+  FAT  + R  P    +L  +                           E     + +R       K  ++ +LD V++++ C+   T++R+P+ R  L    S P
Sbjct:  745 PVQVIPKKQLEIHQTVAELMIMANSWVAKTIFERFPTSALLRIHQSVDESRFEDLKDILDAGKISFDGSSNMK---------LADSLKKAEKSCKTNSAVNS-----LFQSLATRAMSEAQYVSTGQIGGEQG------------LSHYGLGLGKYTHFTSPIRRYADVVVHHQLLQTL--------------------TLKXDDFPLRAPPGFGRK----ALKSLPESKTISIIQGE-------GIEDAKDRKK----ASTSSVTKNIDSPSSTGKAS-----------------------------------DILVEYFSRLTTAG---------------------------------------------------------------------------------------------------KELGDAYT---------------NEKVSKICQTLNRQNRMAKLSSFECQGLFLSLYFKDHVEITQAVVTNLRSNGFWAYIPKFDFRAPIYLSDRDGVVQIDPALLGLKKTSGLDPTTGFATSKSTRRFPSGTCTLHDSL--------------------------EHSHLEVSLRETT----KTYKITILDVVTVKIFCDEWDTKSRVPRPRIHLIADSSEP 1153          
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A836CJZ0_9STRA (DIS3-like exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.470e-32
Identity = 96/181 (53.04%), Postives = 112/181 (61.88%), Query Frame = 0
Query:    1 GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGV 181
            G P+AV  K + EI+HTIAELMILAN  VAE +  AFPS AL+R HA    SRL   + VAA  G++           S G L  SL   +  A RG G G      LLKSLA R MSEA YV TGTL +H A G G+  +   R  HFGLG+  YTHFTSPIRRYAD+VVHRLLLA+ G+
Sbjct:  306 GLPVAVTAKAELEINHTIAELMILANRTVAETVLRAFPSAALLRTHAPVQASRLGLLQEVAAAAGIS-------VEVGSGGALQASLERSQ--AARGAGVGA-----LLKSLATRVMSEAVYVCTGTLDEHSAGG-GVTGE---RLSHFGLGIGSYTHFTSPIRRYADVVVHRLLLAATGL 468          
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: M4BN87_HYAAE (DIS3-like exonuclease 1 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN87_HYAAE)

HSP 1 Score: 124 bits (312), Expect = 3.190e-25
Identity = 103/236 (43.64%), Postives = 128/236 (54.24%), Query Frame = 0
Query:    9 KEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAKVGV-----NNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKA-GLLKSLAVRAMSEAEYVSTGTL-SDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEE 237
            KE+ EIH TIAELMI ANS VA ++   FP+ AL+R H+ P   R T    +A   GV     NN +            L QSL   E      + +   SKA  LLKSLAVR M+EAEYVS+G + +   A   G    + + F H+GLGL +YTHFTSPIRRYAD++VHR LLAS+      ASNA+  T   P    S D  +AP            + LP SLAPSV+E  E
Sbjct:  793 KENLEIHGTIAELMIFANSTVARRLVEHFPTHALLRRHSPPSGDRFTQLVQLANARGVVIDATNNFT------------LQQSLTAAE------RSDRMDSKAISLLKSLAVRVMTEAEYVSSGAVVAGDTATANG----DVTPFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLASIA-----ASNASPSTIFQP----SVDKASAP------------LLLPKSLAPSVLESAE 985          
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A7S1Z5Q1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z5Q1_TRICV)

HSP 1 Score: 117 bits (294), Expect = 4.560e-25
Identity = 83/256 (32.42%), Postives = 121/256 (47.27%), Query Frame = 0
Query:  391 ALLGLKIGPTMA--EDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPP----FGGAELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNGFIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPACRAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVRPPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLL 640
            AL  L    TM+  E+GG    G+   D I +   G SD     +  AR   +++       +   ++ ++C  LN + R AK  +  CQ +FL L+F+D  +V   +V+ +R NG + YVP FD KGPV++ D++G VQVDP++LGLPAG        F  L  CR  P     L                         +DG+ EED  +  + P   G  +    R LD VS++LSC+   T AR+P  R  L
Sbjct:   20 ALESLPASQTMSVLEEGGPDGTGDGINDAIGSMIEGTSDVSIEVNDGARGPRISEESGTAHFYKTGQVAKICVRLNYQTRMAKLSSMDCQRLFLSLYFRDQVEVAPAVVVGVRLNGLLVYVPKFDLKGPVFLCDKDGRVQVDPSILGLPAGVXXXXXXXFTALDGCRMFPDGKCIL-------------------------QDGDKEEDRRLTVMVP---GSSRPCVFRPLDVVSVQLSCDTSDTVARIPPPRLHL 247          
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Match: A0A6A3KMS3_9STRA (DIS3-like exonuclease 1 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KMS3_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.520e-25
Identity = 96/231 (41.56%), Postives = 120/231 (51.95%), Query Frame = 0
Query:    9 KEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPDPSRLTAFEGVAAK--VGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGEGGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRLLSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEE 237
            KE  EIH TIAELMI ANS VA K+   FP+ AL+R H  P   R T    +A    V ++ T+            L QSLA  E       G        LLKSLAVR M+EAEYVS+G ++   A     +    +RF H+GLGL +YTHFTSPIRRYAD++VHR LLA++              T PP   L        P+AK        + LP +LAPSV+E E+
Sbjct:  795 KESLEIHGTIAELMIFANSTVARKLVERFPTHALLRRHPPPSGDRFTQLVQLAKARDVVIDATNNFT---------LQQSLAAAE-----RSGRMDSKTMSLLKSLAVRVMTEAEYVSSGAVAAVDAASSNGDV---TRFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLAAIA-----------SPTLPPSSALQR------PSAKTS----ASLVLPKTLAPSVLESED 987          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6377.17135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSW4_9PHAE0.000e+075.32DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN42_ECTSI2.650e-22167.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LN43_ECTSI5.720e-15395.67DIS3-like exonuclease 1 n=1 Tax=Ectocarpus silicul... [more]
A0A7S4R116_9STRA2.860e-4628.68DIS3-like exonuclease 1 n=2 Tax=Ditylum brightwell... [more]
A0A7S3DYM8_9STRA3.300e-3731.39DIS3-like exonuclease 1 n=1 Tax=Amphiprora paludos... [more]
A0A448Z1J3_9STRA3.020e-3325.73DIS3-like exonuclease 1 n=1 Tax=Pseudo-nitzschia m... [more]
A0A836CJZ0_9STRA1.470e-3253.04DIS3-like exonuclease 1 n=1 Tax=Tribonema minus Ta... [more]
M4BN87_HYAAE3.190e-2543.64DIS3-like exonuclease 1 n=1 Tax=Hyaloperonospora a... [more]
A0A7S1Z5Q1_TRICV4.560e-2532.42Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A6A3KMS3_9STRA5.520e-2541.56DIS3-like exonuclease 1 n=8 Tax=Phytophthora TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 783..803
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 3..184
coord: 445..589
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 6..178
e-value: 2.6E-30
score: 105.9
IPR031192DIS3-like exonuclease 1PANTHERPTHR23355:SF30DIS3-LIKE EXONUCLEASE 1coord: 3..184
coord: 445..589
IPR022966Ribonuclease II/R, conserved sitePROSITEPS01175RIBONUCLEASE_IIcoord: 148..172
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 5..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6377contigEcto-sp13_S_contig6377:711..7771 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6377.17135.1mRNA_Ecto-sp13_S_contig6377.17135.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6377 711..7771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6377.17135.1 ID=prot_Ecto-sp13_S_contig6377.17135.1|Name=mRNA_Ecto-sp13_S_contig6377.17135.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=940bp
GTPLAVAGKEDSEIHHTIAELMILANSAVAEKIQGAFPSQALVRVHASPD
PSRLTAFEGVAAKVGVNNTSESRGKSNSSAGGLSQSLATVEGGALRGQGE
GGKSKAGLLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFG
LGLSHYTHFTSPIRRYADIVVHRLLLASLGVSVTQASNATHHTTKPPPRL
LSGDGFNAPPAAKREDVDEGVVALPSSLAPSVMEMEEAAVGKVEVDAAAE
RRSRRAGAGDASFVINPDGTRTYSKVSVSTTPTAPTPTMTASRLRPPPGM
ESFPELGGPDDGDDLLDSLLGLEVSGAPTAIAAPATAGSDSGFGSSGDVS
GGTMKTKSFSAAAASSGNAAAAAPAADSATFDGDGDSMLDALLGLKIGPT
MAEDGGEATPGEEDQDDITAHGGGGSDTGEAFSPSARDDVVADSPPFGGA
ELGRLCTHLNDRNRRAKRMAQRCQEMFLRLFFKDHSQVVQGLVLSLRSNG
FIAYVPAFDAKGPVYISDREGHVQVDPALLGLPAGAGNPPSKAFATLPAC
RAVPGAGVSLVSTPPAGKSNAVSAYYKAGRGGGPERDGEGEEDEEVLEVR
PPPGGGGKVLRLRVLDGVSLRLSCEVLPTQARLPKVRFLLAGVGSHPASH
SPAAAPAGTTATTPARATRSEHQVHPSRPAPGEGVGSKVDPSGMRMGGGR
GSGGEAALVHSKDRGGSSDGRRRKGGSRGGGEGGLYWLLQGARDDAVARG
NFDEPGGGPAGEARTTSTGGTEPSPLASATAAAAAAEKSAAEIAARRKEK
KERNKRRSNSGGPAAPACPSREQHRSEVGAGRALFGGFVPRTHAPAASLY
DFGGKDQGAGSEQGGGETGGDGGFAGVSSLPSIYNQGGGRGLVQAGGGGV
LETLDDARVRQYTQEATARAQRLGAEKRSSRITKSKRQG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR031192DIS3L
IPR022966RNase_II/R_CS
IPR012340NA-bd_OB-fold