mRNA_Ecto-sp13_S_contig6332.17076.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6332.17076.1
Unique NamemRNA_Ecto-sp13_S_contig6332.17076.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: D7FHL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL5_ECTSI)

HSP 1 Score: 424 bits (1089), Expect = 6.680e-140
Identity = 219/235 (93.19%), Postives = 228/235 (97.02%), Query Frame = 3 
Query:  432 IEKQIVNAGPKADKPEYSSKAEPEPKPQVSIAKLFSYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 1136
            +E Q+VNAGPKADKP+  SKA+PEPKPQVSIAKLFSYADG+DKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELG+PV DSD KTVLESVASFCILFG+IG VAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDI+LNGLSGIALL TG+IINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE
Sbjct:    1 METQMVNAGPKADKPD-DSKAKPEPKPQVSIAKLFSYADGRDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGEPVRDSDEKTVLESVASFCILFGIIGLVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIVLNGLSGIALLVTGLIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 234
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 391 bits (1005), Expect = 2.700e-122
Identity = 206/235 (87.66%), Postives = 216/235 (91.91%), Query Frame = 3 
Query:  432 IEKQIVNAGPKADKPEYSSKAEPEPKPQVSIAKLFSYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 1136
            +EKQ+VNAGPKADKP+  SKA+PEPKPQVSIAKLFSYADG+DKLYMFVG+IAAAIH+C           TLDELG+PVE+ D KT+LESV SFCILFGVIGFVAGVVGFVLV LWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALL TGIIINWELGLVMLACVPFIGGSVAVLS LMSSSTQEGNDHYSKAGGVATE
Sbjct:    1 MEKQMVNAGPKADKPD-DSKAKPEPKPQVSIAKLFSYADGRDKLYMFVGIIAAAIHAC-----------TLDELGEPVEEDDEKTILESVTSFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGLVMLACVPFIGGSVAVLSKLMSSSTQEGNDHYSKAGGVATE 223
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BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A6H5JGF0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF0_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 5.400e-103
Identity = 172/177 (97.18%), Postives = 173/177 (97.74%), Query Frame = 3 
Query:  606 MMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 1136
            MMPLFIANFGSTLDELG+PVEDSD KTVLESVASFCIL GVIG VAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALL TGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE
Sbjct:  157 MMPLFIANFGSTLDELGEPVEDSDGKTVLESVASFCILLGVIGAVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLITGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 333
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BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A6H5J5U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5U8_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 1.040e-98
Identity = 166/177 (93.79%), Postives = 170/177 (96.05%), Query Frame = 3 
Query:  606 MMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 1136
            MMPLFIANFGSTLDELG+PV + D +T+ ESVASFCILFGVIGFVAGVVGFVLV LWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALL TGIIINWELGLVMLACVPFIGGSVAVLS LMSSSTQEGNDHYSKAGGVATE
Sbjct:    1 MMPLFIANFGSTLDELGEPVGEGDEQTISESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLITGIIINWELGLVMLACVPFIGGSVAVLSKLMSSSTQEGNDHYSKAGGVATE 177
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BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 3.830e-81
Identity = 140/210 (66.67%), Postives = 169/210 (80.48%), Query Frame = 3 
Query:  462 KADKPEYSSKAEPEPKPQVSIAKLFSYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQ 1091
            K DKP+       EPKPQV  +KLF++AD +D L+MF+G IAA + +C MPLF+  FG TLD LG P ED +  +V E+V  F +LFGVIG ++GV GF +V+LWSI+GE QALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGD ILNGL GIALL T +++NW+LGL+ML CVP IG +VA+++ LMSS+TQ
Sbjct:   50 KGDKPKE------EPKPQVPFSKLFTFADQRDMLFMFIGTIAACVQACTMPLFMTTFGDTLDGLGQPTEDGEVSSVAETVQKFVVLFGVIGVLSGVSGFAMVSLWSIAGECQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDSILNGLGGIALLITAMVVNWQLGLIMLGCVPLIGVTVAIVTQLMSSTTQ 253
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BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A6H5JRQ1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ1_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 7.400e-67
Identity = 113/162 (69.75%), Postives = 135/162 (83.33%), Query Frame = 3 
Query:  609 MPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQE 1094
            MPLF+  FG TLD LG P ED +  +V E+V  F +LFGVIG ++GV GF +V+LWSI+GE QALRMRREYVKCILKQDIGWFD HPAGQLPTAVTANMAKVQDGLGRKIGD ILNGL GIALL T +++NW+LGL+M+ CVP IG +VA+++ LMS +TQ+
Sbjct:    1 MPLFMTTFGDTLDGLGQPTEDGEVASVAEAVQKFVVLFGVIGALSGVSGFAMVSLWSIAGECQALRMRREYVKCILKQDIGWFDAHPAGQLPTAVTANMAKVQDGLGRKIGDSILNGLGGIALLITAMVVNWQLGLIMMGCVPLIGATVAIVTQLMSITTQK 162
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BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.860e-47
Identity = 96/190 (50.53%), Postives = 126/190 (66.32%), Query Frame = 3 
Query:  567 MFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 1136
            M +G  AA      MP FI  FG TLD L D    +D KTV++    FC++F V+G VA V GF+ V  W+I+GERQALR++  YVK IL+QD+GWFDEHPAGQLP+ VT+ M KVQDG+GRKI D ++NG   +  L     +N  L  ++L+ +P IG +V +++ LMS ST EG  HYS+AG VA E
Sbjct:    1 MLIGTAAACTSGAAMPYFIVYFGKTLDGLND---STDIKTVVQG---FCLVFLVVGIVASVCGFIFVLCWTIAGERQALRLKEAYVKAILRQDVGWFDEHPAGQLPSMVTSLMGKVQDGIGRKIADSMMNGAGSMGCLIAAFYLNPTLSAILLSALPLIGFAVGMVTKLMSKSTLEGQGHYSRAGAVANE 184
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA)

HSP 1 Score: 176 bits (447), Expect = 8.160e-45
Identity = 97/190 (51.05%), Postives = 122/190 (64.21%), Query Frame = 3 
Query:  567 MFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 1136
            M +GV AA +    MP FI  FG TLD L D  +      VL  V+ FC +F V+G V+   GF  V  W++SGERQALR++  YVK IL+QDIGWFDEHPAGQLP+ VT+ M KVQDG+GRK+ D I+N  S I  L     +N  L  ++L C+P +G SV +++ LMS ST EG  HYS AG VA E
Sbjct:    1 MAIGVAAALVSGAGMPYFIVYFGKTLDGLNDNAD------VLGVVSGFCTVFLVVGAVSFAGGFTFVLCWTMSGERQALRLKEAYVKAILRQDIGWFDEHPAGQLPSMVTSLMGKVQDGIGRKVADAIMNCASAIGQLIAAFYLNPVLSAILLCCLPAVGLSVGLVTMLMSKSTIEGQGHYSLAGAVANE 184
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A836CNL1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.120e-37
Identity = 90/225 (40.00%), Postives = 133/225 (59.11%), Query Frame = 3 
Query:  507 KPQVSIAKLFSYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQ---------------DIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 1136
            K +VS+ +LFS AD  D+  ++VG +AAA+     P F+  FG TLD L       D +++   VA+F I+F ++G VA + GFV V  W+I+G+RQA RM+++YVK IL+                D+GWFDEHPAGQLPT VT  +A + DG+G KI   I+NG S I L       + +L  ++LAC+P +G +  V++ LM+ +       Y+ +GG+A E
Sbjct:   54 KERVSLGQLFSLADSVDQGLVWVGSVAAAVTGAARPFFMIYFGKTLDGLNST---GDLRSI---VANFAIIFVIVGAVASITGFVAVYSWTIAGDRQATRMKQQYVKGILRXXXXXXXXXXXXXXXXDMGWFDEHPAGQLPTLVTNRLATIADGIGSKIPIAIMNGFSCIGLFIVAFWQDPQLAAILLACLPLVGFATVVVTKLMTRAQTASQGFYAASGGIANE 272
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BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.200e-33
Identity = 93/211 (44.08%), Postives = 123/211 (58.29%), Query Frame = 3 
Query:  516 VSIAKLF-SYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWEL---GLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 1136
            V  AKL   YA   + LYMF+G I+A +       FI  FG  +D+L     D+   TV+                           W+ +GE+ AL++++EYV+ IL+QDIGWFDEHPAG+LP+AVT+ MAK+QDG+GRKI DII+N       LAT II   EL     V+LAC PFI  S  VL  +++ +T +GN+HYSKAGGVA E
Sbjct:   82 VGTAKLLLKYASPLEMLYMFLGTISAIVCG-----FIIVFGDVMDKLNG---DNILNTVM--------------------------FWNTAGEQVALKLKKEYVRAILRQDIGWFDEHPAGELPSAVTSAMAKIQDGVGRKIADIIMNFT---VFLATFIIAFTELPKLAAVLLACFPFIAISTFVLVTVVAKATGQGNNHYSKAGGVANE 255
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHL5_ECTSI6.680e-14093.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHL4_ECTSI2.700e-12287.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGF0_9PHAE5.400e-10397.18ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5J5U8_9PHAE1.040e-9893.79ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FHL1_ECTSI3.830e-8166.67ATP-binding cassette, sub-family B (MDR/TAP), memb... [more]
A0A6H5JRQ1_9PHAE7.400e-6769.75ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CGZ9_9STRA1.860e-4750.53ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A836CDG9_9STRA8.160e-4551.05ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A836CNL1_9STRA1.120e-3740.00P-loop containing nucleoside triphosphate hydrolas... [more]
D8LS12_ECTSI1.200e-3344.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6332contigEcto-sp13_S_contig6332:1550..8144 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score424.5
Seed ortholog evalue4.5e-116
Seed eggNOG ortholog2880.D7FHL5
Model size1218
KEGG koko:K05658
KEGG TC3.A.1.201
KEGG Pathwayko02010,ko04976,ko05206,ko05226,map02010,map04976,map05206,map05226
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1132@1,KOG0055@2759
EC3.6.3.44
Cds size957
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko04090,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6332.17076.1prot_Ecto-sp13_S_contig6332.17076.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6332 1780..8113 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463877.8707886-UTR-Ecto-sp13_S_contig6332:1549..17791681463877.8707886-UTR-Ecto-sp13_S_contig6332:1549..1779Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6332 1550..1779 +
1681463877.96193-UTR-Ecto-sp13_S_contig6332:8113..81441681463877.96193-UTR-Ecto-sp13_S_contig6332:8113..8144Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6332 8114..8144 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463877.8822896-CDS-Ecto-sp13_S_contig6332:1779..18241681463877.8822896-CDS-Ecto-sp13_S_contig6332:1779..1824Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6332 1780..1824 +
1681463877.8920703-CDS-Ecto-sp13_S_contig6332:4576..48161681463877.8920703-CDS-Ecto-sp13_S_contig6332:4576..4816Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6332 4577..4816 +
1681463877.9025178-CDS-Ecto-sp13_S_contig6332:5185..52741681463877.9025178-CDS-Ecto-sp13_S_contig6332:5185..5274Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6332 5186..5274 +
1681463877.9127085-CDS-Ecto-sp13_S_contig6332:5899..60921681463877.9127085-CDS-Ecto-sp13_S_contig6332:5899..6092Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6332 5900..6092 +
1681463877.9307272-CDS-Ecto-sp13_S_contig6332:6586..67551681463877.9307272-CDS-Ecto-sp13_S_contig6332:6586..6755Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6332 6587..6755 +
1681463877.94335-CDS-Ecto-sp13_S_contig6332:7175..73451681463877.94335-CDS-Ecto-sp13_S_contig6332:7175..7345Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6332 7176..7345 +
1681463877.9530709-CDS-Ecto-sp13_S_contig6332:8062..81131681463877.9530709-CDS-Ecto-sp13_S_contig6332:8062..8113Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6332 8063..8113 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6332.17076.1

>prot_Ecto-sp13_S_contig6332.17076.1 ID=prot_Ecto-sp13_S_contig6332.17076.1|Name=mRNA_Ecto-sp13_S_contig6332.17076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=319bp
MSDPSPAAVTDSSMEAAADASASTAAVAAVVATTVSASPPPATAAAPAPA
PEAVAVPATPVKAGAPGIEKQIVNAGPKADKPEYSSKAEPEPKPQVSIAK
LFSYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDA
KTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKC
ILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALL
ATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVA
TERSQLIGPGGSWSINSP*
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mRNA from alignment at Ecto-sp13_S_contig6332:1550..8144+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6332.17076.1 ID=mRNA_Ecto-sp13_S_contig6332.17076.1|Name=mRNA_Ecto-sp13_S_contig6332.17076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6595bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6332:1550..8144+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCCATACTACGCGCATATCTCACCGCCCTTCTGAACTGGCATCCCCGCTG
TAGGAGTTGCCCAAGTTCTGCGTCGCCTCGCCGCCATCCCAGCCACTAGT
GTGTGGGGAAGGAAGGATCGGGCAGTGACAGATACCTCTCGTGTCTGGCA
ACAGGAAGAAGGAATTGAAGAAGCAGGACCAAAATCGTTCCTCTCGGCAC
AGGTTGCAGTGCACAGCACCCCGGTATCCGATGAGCGACCCTTCGCCTGC
TGCCGTGACGGATAGCAGCATGGAGGTGAGTGGGCGGCGCTGTCGTTGCA
CGCAAACGGTATTGGTTTCTGTAGGCAAAGGTGCAGCCTTGCGGTTGCTG
GTGTTTGATTCACGAGAGAGGAATGCTGTAGTTGTACAGTACAGAAGCAG
GGTTCAGCGGCGAGCACTCAACCGCAAAGAGCTTGAGCAGGCAGGCCAGC
GCGTGCGAATCACACGCTCACCGTCGGCTTCAAGTCGCGCGAAAGCTTGT
GGGGTCTTGCGCTCTGCTGAGTGTGTGTGTGCTTTTCTCCCACGATGGTT
GGCGGGAAGCTGCTCCCTGGTGTTTTTTTCAGGCCTCCTGCACTTATTAC
ACAGGCTTGTTGCACATGTAGAAGTTGCCGTTTTCGCGTTTCCGGGGGGC
GGACGTCCTATGCGGACACGGCAGTGAAGCGACAGCCGGCCTCTTTTGCT
ACCGCACCGTCCAACACAAATCCAGACGCCGCCGCTGCTGTCTATAGCCA
ATGTTATCGTGACTGATTTGTGGCGTGCGAGGGACCCGCGGCACACACCT
AAGGGCAAGCGAAGCCGGCAACCTGCTTCAGTATCACGAGCAACTCTCGG
CAAATTTGATGCCAATTCCCCGCCCTTTTCCTGGGTGGTGCAACCTCTTC
GGACCAAGCGTGCACAGCAGAGACAACACCACATGTAGTGTTTGGTAGCT
GGGGGCGGGGCGGGGGGGGCAGCGACCCTTAGGTAGACTGGACAGCGAAA
GAGGAGCACATGCATTCCTCGTGTGAAGTAAGGTGCATCTTTGGACAGTG
TAATAACGTAATAACCACACACGGATTCTTCGGGCGGGCAAGGATTGCAG
TTCTGCCTCCTCTACCCCGCCCTGTTCGCAACTACTGTACTGCTGTAAAA
TAAAATGTAGTACTGCTGTAGGACATATACAGGTGCAGAGACACCCGCGT
TGCTCATGTTACACGGAACGGCCCCGCGCATTCCACGTAGCCACACTTTC
TTGCGTCCGGTACAGTAGTTAGAGGGTTTTCTTAGTACTTGACCAGATAA
TGGTGGCACTCCGTGCAACAGGGCTCTGTTTTTCCTCGTTCTTCTCTGAA
CAGCATGTCGACAACGGCGGTGTCTGTGCGAGGAGAAAATGCGAGGAGGT
GTGAAATACACACTGAACTGTTGCAGACTGCTGTGCGCAGAAGCAGACGA
GGGATGCAGGGTTGGTTCAGAGAGACGTTCTCGCACATCTGCCTGGCTTC
ATGAGACACCCTGCCGCGGCCACCCATCTCTCTTCCCTATTTAAGCACTG
AACACATTTTGTGTCCTCCTCCTTGTTGTGAGTGAAGCTACTGCGGCCGT
CTGATCCCTCTCACGAAGCAACAAGTAGCGGCAAGCTATATCTAGCAAGC
TTCGTAGCGCTGCATGCAGGCACGCAGTGGAGTCAACAACTAATGACGAT
TTTCAGATTTAGTCTATATGTACAGTTCCCGACCGTCCGGCCTCGAACTA
AAAGAGCAGGCTGCGCGACAGCAACCGCTCACCGGTTTTCTTAACCGGCA
CGATTGCTATTTACTCGTACCAAACAAAATGTATTTGCTGCTCGGGGAAC
CATGTGCAAAGAAAACGCAGCTACTGTAGCTTCCGCTGAATCAATGAATC
CGTTGTCAGTCTCACCAAGACTTTTTTGAAAGTGAAAACAAAATCTCGCA
GAAGGACTTTTTTGGGCTGAATCCGTTGCTACCGCAGCAGTAGTCTATCG
AAGCCTCTTTTAGCTGTGGAGAATTTAAACTCGTTGTGTTATTAATGAGA
AAAACGAGTGCAAGCGCAGCGGTGCCGAGGTAGATGACGTAGACGAGATA
CGAAAGGAAACGTGATGTTTTGCGCATGTTTATATACGTGTGGCGGGCGT
GCGCGCGAATCATGTAACTTGCTTGAATCGGCCGCATTACTAAGAGCTCG
TGCATCGTGTCGTCCCGCGCAGTCATCGTAATAATGATCGCAACGAGTTT
TAATTTACAAAGTATTCGTACCATCGCAGAGAGACTGCATGTTCGAGACA
ACACCACAGCAGTCGAAGCGAAGGGGCTGCTGTGTTTCATGTCTATGTGC
GGGGCATGGGGCTGGGTGACATACCGGTAGTTGGGCTTGCGGGGTGGGGT
CCCCGTATATTGCTGGTATGTGCTCAGAAATTCACCGGCACTACGCCAGA
CGGGCACTATTCAAGGTACTGACAAATGACTTGGAAATTCAACGTGTGCC
CGCCCAAAACACCGGCACCATTCCGGACATGGGCCTCATTCAAACAGCAC
TCAACAGGGACCCCCACGGCTTTCAATAGATATTGTACAAATTTTTTTTT
GTACATTGAGCGCCAGCACTTGAGAAATCGTTCAAGTCTCTTGTCAAACA
CTCAAAATCTTGAGCACCGTTTGTGAGTTCGGTTAAGAAGCCCTACACTG
TAACCTATATAGCAAACATTCGCAGCATAACCCTAGGACATAATAGCACC
AGGGACGGCCCAAACTAGAGGTTTTTGAGTGCTGGAGCTACCGGTGGTCT
CTGCAACGATGGTATTCTCGCGGACCCACTCCAGGACATGTCTATATAAC
AGAATGACGGGGACAAGACATCGCACAGCAGTCACGCCAGCGCCAACCCA
CTTTCATCGTACGACCACAGAATAACAACCAGCAGACCAACCTAGACCTA
TTCCGAGAGCAAAAGCTTAAGAGTGTGCGGCGCACCTTTGTTGCGCGTGT
GTTTGCCTCGATTCCCCTGTGCATCAGGCCGCTGCTGATGCTTCTGCTAG
CACAGCTGCTGTTGCTGCTGTAGTGGCTACTACCGTGTCGGCGTCTCCCC
CGCCGGCCACAGCGGCGGCACCGGCGCCAGCGCCGGAGGCCGTTGCCGTT
CCGGCTACTCCGGTCAAGGCCGGCGCTCCTGGCATCGAGAAACAGATCGT
GAACGCGGGCCCTAAGGCGGACAAGCCCGAATACTCCTCCAAGGCCGAGC
CCGAACCCAAGCCACAGGTGGGGTTGCTATTGGGAAGTGTTGAAGGTGTG
CGTTCGCGTGTGGGTGGTGGCTGCGGCGACGCTCGGCACAGCGCTCCCGG
CCGTGCTATCACAGGCCACGAACCACTGCTGTGTAGCCGTCAGGGACTCT
GTTCTAGACAACGTATATTTTGTTGTACGTGAAAACAAAATGAGCTTGGA
AAAACTTGGAACATTTTCGTACATGATGTTTGTCTCATGTTTTTAATTTT
ACGCTGTCTTGCCATGACTCTTACAATATTAATCGCGTTTGTCGTCGCAT
GTCTCCATAGGCAGGTCGAATAAGCTCGCTTCCGAAAACACTTGTTCCTA
CGCTACTGCGTTGTCCGTTTACACCCATGTGCGCAGGTGTCTATCGCCAA
GCTTTTTTCCTACGCCGATGGGAAAGACAAGTTGTACATGTTCGTCGGGG
TCATCGCTGCGGCAATACATTCCTGGTGAGCCGATACCCTAACCCTAGGC
GGTTTTGTGAAAAAGCAATTCTACTTCATGCTGTGTTGGTCTCTGACATG
CTAACACCGTGAACGTCCCCAATAACGCCGGTATATGCTCGGCGAATCGA
GAAAGGATTTTCTCTCCATTCTGTGTTTGTCTCGGGCATGCCTAAACGGT
AGGGGGAGCTCAACATGGCCGGTATGTGCCCAGCGAATCAACCGACCCAT
TCAGACTGTAAGACGACTTGGTGGATCAGTCTGTGCCAAACATTCTCACC
CGCGCTTTACAGGCCATCCGGTGCTTTTCAACCAGCGTTAATTAAGGGTC
TCCAACTATGCTCAGGTCCCATCTGCCCTGAGGGGTCAGAATATATTTCG
CTGTCAAGACGGCAGTACAACAATCGTCTTCTGTGCTTCATTTGCACGAT
CAATAACCCCCCCTTCTTCAGCAACCTTGGCAGAGGAGTAGGAAGGAACA
ATCGGTGATCGGTCCTATGGGGAAAAGGCTCCGGCCTGTCGAGGACGCGC
GGTCAATGGTCCAACAACCGAGGCATGAAACACATGAGTACGCGCCCCCC
CCCCCCCCCCCCCCGTCCGTTGTATTCGGCTTTCCGGCGTGCCCGTGCAG
CATGATGCCCCTCTTCATCGCCAACTTCGGCAGTACCCTGGACGAACTCG
GCGATCCTGTGGAGGATAGCGACGCAAAAACGGTCCTGGAGAGCGTGGCG
AGCTTCTGCATCCTCTTTGGTGTGATCGGCTTCGTCGCCGGGGTGGTCGG
GTTCGTCCTCGTGGCCCTTTGGAGTATCTCCGGAGAACGCCAGGTGGGTG
CGGGTGCGAGTATATGGGTGTTGTTTGCATCGACCACGCTACATAGCCGA
CTGATCATTGAAAATACGTCAGTCTCGCAGCTGGATAAAGATGCGTGTAC
GCGTGTGTTTAATTGGTAGCATCGACCGCGCTACCCGGCTGACCGATTAA
AAGGACGCTATTCTTGTATGAAAGCGGGATAATAAACGGAAAAAACGAAG
ACGCTTTCTTTTCAAAGATTTGAAAGGGTTCTACCGGTACGGGCGGTGCA
GGTCTGAACTACTGCACGAGGACGGGATCCAATGCTGTGTGTGTGTCTGT
GCTGCGGTGTTAGGAAGCAGAGCCGCGCATTCCGGCTGACAAAGCAAATT
TCGGTGTGTTCGTGTGGCATGAGAGGCATTAGGAATACTTCCAGTGAAAC
ACGAGTAGAGCGAAGTCGCGCACTCCGACCGAAACCACTTTTTGTCGCCG
GCGGTTCTTGTTTTGTTCTTCCTTCTTGCTGTTGCAGGCGCTACGCATGC
GGAGGGAATACGTGAAGTGCATCCTGAAGCAGGACATCGGATGGTTCGAT
GAGCACCCCGCAGGGCAACTTCCCACGGCCGTCACCGCCAACATGGCAAA
GGTGCAGGACGGCTTGGGCAGGAAGATCGGGGACATCATCCTCAACGGCC
TCAGCGGTGAGTAGTACGGGCCCTCGGTCAACAAGTATTCCGTTAAGAAG
TTCTAGTAGGGGCTCAGACTATCACTAAAAATACGAAGCACGTGTAGGTC
TAAAGACGCATAGCTCAGCGGTGGATTCTGCACTAGGATCTAGGTAAATA
CCCACCTGTGCTCCGACGGTAGATAGCGATGAAATGAGAAGCTGGGCCTC
TACCCAATTTTTGGCGTTTCTTGACTTATCTGCAGGTCCGTATCGAATAC
CTTGCGTCGGTGATGATGGTGGCGGCGGCATTGGTTGTGGTGGTGGTGGG
TGTTGGTGCTGCTGCTGGTCAACGACACAGATGTGTCGTTGCTATTGTTG
GTGCTGCAGCGGTTCCTCGTGTGAAGCTTGCGTTTGGTCGGTGCTTGGTT
CCGTACGTGCGGTGTCGAATGTGCAGGCATTGCCCTGCTTGCCACTGGGA
TCATCATCAACTGGGAGCTCGGGCTGGTGATGCTTGCGTGCGTTCCCTTC
ATCGGTGGGAGCGTCGCTGTCCTGTCCGCGCTCATGTCCAGCAGCACTCA
GGAGGGGAACGATCACTACTCCAAGGCTGGCGGTGTTGCCACGGAGGTGT
GTGTCTGTCTGTTCGTCTTTTTCGGTTTGCATCGATCGCGCTAACCGGAT
GACGTCAGTCCTAATTCTCTGGAAAATACGAAATGCTGCTATTGGCCACG
ATCTGGAACCCTGCGACCGCGCGTCATGTGGGAGTCTACGGTACTCTCCG
AAAAAAAGGCAGACACCGTAGCAAAAACAGAAGAAAGCTGCACATGTTTG
CCATGGCTGCTATGATTTTGGATGCGCGTGTGTTTTGTATATGTTTTTTA
TTATCAGCATCGACCGCGCTAACCGGCTGTCCAATGAAAAGACGTCAGTC
TTAGTGCGGTTGAAAACACCATGAACTGGGACCCCGTGAGGGAGCAGCAT
GGGGGAGGCTAAACTATCCTTCGGATCAAAAACAGAAACAGCAGCAACAG
GAGAAAATTGCACGCGTCTACGAAGGCTATTTCCTAGTGCTCGAGTTCGT
TTAGGAGTACTTTCCCCGGTATCCTCCTTGTTCTCGCTACCGTAATTCTG
ATCCTCATTTTAACAAGAAGAATCTCTGGGCAGTTCTTCCCTAGACCTAC
GTTTCTTGTTGTGGGGAAGGTCATCTGGCTCAAACCCTTTGCTCTCTTCC
ACTCCTCCAATTTTCCTGCTCCATCGTCGTCTTCGTTCTCCTTTCTTCCC
TTTCCCTTTCCTTCGTCTCCGTGACTCCCAAAATAATTACCCTCATTACT
ATCGTTGTTGCAGAGATCCCAACTGATTGGCCCTGGTGGAAGTTGGTCGA
TCAATAGCCCATGACGTTTGAACACATCGCGAGTTCGCATCGACA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6332:1550..8144+

>mRNA_Ecto-sp13_S_contig6332.17076.1 ID=mRNA_Ecto-sp13_S_contig6332.17076.1|Name=mRNA_Ecto-sp13_S_contig6332.17076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=957bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6332:1550..8144+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCGACCCTTCGCCTGCTGCCGTGACGGATAGCAGCATGGAGGCCGC
TGCTGATGCTTCTGCTAGCACAGCTGCTGTTGCTGCTGTAGTGGCTACTA
CCGTGTCGGCGTCTCCCCCGCCGGCCACAGCGGCGGCACCGGCGCCAGCG
CCGGAGGCCGTTGCCGTTCCGGCTACTCCGGTCAAGGCCGGCGCTCCTGG
CATCGAGAAACAGATCGTGAACGCGGGCCCTAAGGCGGACAAGCCCGAAT
ACTCCTCCAAGGCCGAGCCCGAACCCAAGCCACAGGTGTCTATCGCCAAG
CTTTTTTCCTACGCCGATGGGAAAGACAAGTTGTACATGTTCGTCGGGGT
CATCGCTGCGGCAATACATTCCTGCATGATGCCCCTCTTCATCGCCAACT
TCGGCAGTACCCTGGACGAACTCGGCGATCCTGTGGAGGATAGCGACGCA
AAAACGGTCCTGGAGAGCGTGGCGAGCTTCTGCATCCTCTTTGGTGTGAT
CGGCTTCGTCGCCGGGGTGGTCGGGTTCGTCCTCGTGGCCCTTTGGAGTA
TCTCCGGAGAACGCCAGGCGCTACGCATGCGGAGGGAATACGTGAAGTGC
ATCCTGAAGCAGGACATCGGATGGTTCGATGAGCACCCCGCAGGGCAACT
TCCCACGGCCGTCACCGCCAACATGGCAAAGGTGCAGGACGGCTTGGGCA
GGAAGATCGGGGACATCATCCTCAACGGCCTCAGCGGCATTGCCCTGCTT
GCCACTGGGATCATCATCAACTGGGAGCTCGGGCTGGTGATGCTTGCGTG
CGTTCCCTTCATCGGTGGGAGCGTCGCTGTCCTGTCCGCGCTCATGTCCA
GCAGCACTCAGGAGGGGAACGATCACTACTCCAAGGCTGGCGGTGTTGCC
ACGGAGAGATCCCAACTGATTGGCCCTGGTGGAAGTTGGTCGATCAATAG
CCCATGA
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