prot_Ecto-sp13_S_contig6332.17076.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6332.17076.1
Unique Nameprot_Ecto-sp13_S_contig6332.17076.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length319
Homology
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: D7FHL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL5_ECTSI)

HSP 1 Score: 424 bits (1089), Expect = 2.650e-141
Identity = 219/235 (93.19%), Postives = 228/235 (97.02%), Query Frame = 0
Query:   68 IEKQIVNAGPKADKPEYSSKAEPEPKPQVSIAKLFSYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 302
            +E Q+VNAGPKADKP+  SKA+PEPKPQVSIAKLFSYADG+DKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELG+PV DSD KTVLESVASFCILFG+IG VAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDI+LNGLSGIALL TG+IINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE
Sbjct:    1 METQMVNAGPKADKPD-DSKAKPEPKPQVSIAKLFSYADGRDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGEPVRDSDEKTVLESVASFCILFGIIGLVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIVLNGLSGIALLVTGLIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 234          
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 391 bits (1005), Expect = 1.120e-123
Identity = 206/235 (87.66%), Postives = 216/235 (91.91%), Query Frame = 0
Query:   68 IEKQIVNAGPKADKPEYSSKAEPEPKPQVSIAKLFSYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 302
            +EKQ+VNAGPKADKP+  SKA+PEPKPQVSIAKLFSYADG+DKLYMFVG+IAAAIH+C           TLDELG+PVE+ D KT+LESV SFCILFGVIGFVAGVVGFVLV LWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALL TGIIINWELGLVMLACVPFIGGSVAVLS LMSSSTQEGNDHYSKAGGVATE
Sbjct:    1 MEKQMVNAGPKADKPD-DSKAKPEPKPQVSIAKLFSYADGRDKLYMFVGIIAAAIHAC-----------TLDELGEPVEEDDEKTILESVTSFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGLVMLACVPFIGGSVAVLSKLMSSSTQEGNDHYSKAGGVATE 223          
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A6H5JGF0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF0_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 2.550e-104
Identity = 172/177 (97.18%), Postives = 173/177 (97.74%), Query Frame = 0
Query:  126 MMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 302
            MMPLFIANFGSTLDELG+PVEDSD KTVLESVASFCIL GVIG VAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALL TGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE
Sbjct:  157 MMPLFIANFGSTLDELGEPVEDSDGKTVLESVASFCILLGVIGAVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLITGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 333          
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A6H5J5U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5U8_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 4.990e-100
Identity = 166/177 (93.79%), Postives = 170/177 (96.05%), Query Frame = 0
Query:  126 MMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 302
            MMPLFIANFGSTLDELG+PV + D +T+ ESVASFCILFGVIGFVAGVVGFVLV LWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALL TGIIINWELGLVMLACVPFIGGSVAVLS LMSSSTQEGNDHYSKAGGVATE
Sbjct:    1 MMPLFIANFGSTLDELGEPVGEGDEQTISESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLITGIIINWELGLVMLACVPFIGGSVAVLSKLMSSSTQEGNDHYSKAGGVATE 177          
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 2.070e-82
Identity = 140/210 (66.67%), Postives = 169/210 (80.48%), Query Frame = 0
Query:   78 KADKPEYSSKAEPEPKPQVSIAKLFSYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQ 287
            K DKP+       EPKPQV  +KLF++AD +D L+MF+G IAA + +C MPLF+  FG TLD LG P ED +  +V E+V  F +LFGVIG ++GV GF +V+LWSI+GE QALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGD ILNGL GIALL T +++NW+LGL+ML CVP IG +VA+++ LMSS+TQ
Sbjct:   50 KGDKPKE------EPKPQVPFSKLFTFADQRDMLFMFIGTIAACVQACTMPLFMTTFGDTLDGLGQPTEDGEVSSVAETVQKFVVLFGVIGVLSGVSGFAMVSLWSIAGECQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDSILNGLGGIALLITAMVVNWQLGLIMLGCVPLIGVTVAIVTQLMSSTTQ 253          
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A6H5JRQ1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ1_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 4.910e-68
Identity = 113/162 (69.75%), Postives = 135/162 (83.33%), Query Frame = 0
Query:  127 MPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQE 288
            MPLF+  FG TLD LG P ED +  +V E+V  F +LFGVIG ++GV GF +V+LWSI+GE QALRMRREYVKCILKQDIGWFD HPAGQLPTAVTANMAKVQDGLGRKIGD ILNGL GIALL T +++NW+LGL+M+ CVP IG +VA+++ LMS +TQ+
Sbjct:    1 MPLFMTTFGDTLDGLGQPTEDGEVASVAEAVQKFVVLFGVIGALSGVSGFAMVSLWSIAGECQALRMRREYVKCILKQDIGWFDAHPAGQLPTAVTANMAKVQDGLGRKIGDSILNGLGGIALLITAMVVNWQLGLIMMGCVPLIGATVAIVTQLMSITTQK 162          
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.580e-48
Identity = 96/190 (50.53%), Postives = 126/190 (66.32%), Query Frame = 0
Query:  113 MFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 302
            M +G  AA      MP FI  FG TLD L D    +D KTV++    FC++F V+G VA V GF+ V  W+I+GERQALR++  YVK IL+QD+GWFDEHPAGQLP+ VT+ M KVQDG+GRKI D ++NG   +  L     +N  L  ++L+ +P IG +V +++ LMS ST EG  HYS+AG VA E
Sbjct:    1 MLIGTAAACTSGAAMPYFIVYFGKTLDGLND---STDIKTVVQG---FCLVFLVVGIVASVCGFIFVLCWTIAGERQALRLKEAYVKAILRQDVGWFDEHPAGQLPSMVTSLMGKVQDGIGRKIADSMMNGAGSMGCLIAAFYLNPTLSAILLSALPLIGFAVGMVTKLMSKSTLEGQGHYSRAGAVANE 184          
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA)

HSP 1 Score: 176 bits (447), Expect = 7.320e-46
Identity = 97/190 (51.05%), Postives = 122/190 (64.21%), Query Frame = 0
Query:  113 MFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 302
            M +GV AA +    MP FI  FG TLD L D  +      VL  V+ FC +F V+G V+   GF  V  W++SGERQALR++  YVK IL+QDIGWFDEHPAGQLP+ VT+ M KVQDG+GRK+ D I+N  S I  L     +N  L  ++L C+P +G SV +++ LMS ST EG  HYS AG VA E
Sbjct:    1 MAIGVAAALVSGAGMPYFIVYFGKTLDGLNDNAD------VLGVVSGFCTVFLVVGAVSFAGGFTFVLCWTMSGERQALRLKEAYVKAILRQDIGWFDEHPAGQLPSMVTSLMGKVQDGIGRKVADAIMNCASAIGQLIAAFYLNPVLSAILLCCLPAVGLSVGLVTMLMSKSTIEGQGHYSLAGAVANE 184          
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: A0A836CNL1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.160e-38
Identity = 90/225 (40.00%), Postives = 133/225 (59.11%), Query Frame = 0
Query:   93 KPQVSIAKLFSYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQ---------------DIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 302
            K +VS+ +LFS AD  D+  ++VG +AAA+     P F+  FG TLD L       D +++   VA+F I+F ++G VA + GFV V  W+I+G+RQA RM+++YVK IL+                D+GWFDEHPAGQLPT VT  +A + DG+G KI   I+NG S I L       + +L  ++LAC+P +G +  V++ LM+ +       Y+ +GG+A E
Sbjct:   54 KERVSLGQLFSLADSVDQGLVWVGSVAAAVTGAARPFFMIYFGKTLDGLNST---GDLRSI---VANFAIIFVIVGAVASITGFVAVYSWTIAGDRQATRMKQQYVKGILRXXXXXXXXXXXXXXXXDMGWFDEHPAGQLPTLVTNRLATIADGIGSKIPIAIMNGFSCIGLFIVAFWQDPQLAAILLACLPLVGFATVVVTKLMTRAQTASQGFYAASGGIANE 272          
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.430e-34
Identity = 93/211 (44.08%), Postives = 123/211 (58.29%), Query Frame = 0
Query:   96 VSIAKLF-SYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDAKTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLATGIIINWEL---GLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVATE 302
            V  AKL   YA   + LYMF+G I+A +       FI  FG  +D+L     D+   TV+                           W+ +GE+ AL++++EYV+ IL+QDIGWFDEHPAG+LP+AVT+ MAK+QDG+GRKI DII+N       LAT II   EL     V+LAC PFI  S  VL  +++ +T +GN+HYSKAGGVA E
Sbjct:   82 VGTAKLLLKYASPLEMLYMFLGTISAIVCG-----FIIVFGDVMDKLNG---DNILNTVM--------------------------FWNTAGEQVALKLKKEYVRAILRQDIGWFDEHPAGELPSAVTSAMAKIQDGVGRKIADIIMNFT---VFLATFIIAFTELPKLAAVLLACFPFIAISTFVLVTVVAKATGQGNNHYSKAGGVANE 255          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6332.17076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHL5_ECTSI2.650e-14193.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHL4_ECTSI1.120e-12387.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGF0_9PHAE2.550e-10497.18ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5J5U8_9PHAE4.990e-10093.79ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FHL1_ECTSI2.070e-8266.67ATP-binding cassette, sub-family B (MDR/TAP), memb... [more]
A0A6H5JRQ1_9PHAE4.910e-6869.75ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CGZ9_9STRA1.580e-4850.53ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A836CDG9_9STRA7.320e-4651.05ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A836CNL1_9STRA1.160e-3840.00P-loop containing nucleoside triphosphate hydrolas... [more]
D8LS12_ECTSI1.430e-3444.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 113..302
e-value: 9.9E-36
score: 123.8
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 114..302
score: 24.802
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 91..307
e-value: 1.1E-57
score: 197.5
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 101..303
NoneNo IPR availablePANTHERPTHR24222FAMILY NOT NAMEDcoord: 83..306
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 239..256
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 262..282
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 257..261
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 283..318
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 185..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..184
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..136
NoneNo IPR availableTMHMMTMhelixcoord: 162..184
NoneNo IPR availableTMHMMTMhelixcoord: 260..282
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 239..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6332contigEcto-sp13_S_contig6332:1780..8113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6332.17076.1mRNA_Ecto-sp13_S_contig6332.17076.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6332 1550..8144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6332.17076.1 ID=prot_Ecto-sp13_S_contig6332.17076.1|Name=mRNA_Ecto-sp13_S_contig6332.17076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=319bp
MSDPSPAAVTDSSMEAAADASASTAAVAAVVATTVSASPPPATAAAPAPA
PEAVAVPATPVKAGAPGIEKQIVNAGPKADKPEYSSKAEPEPKPQVSIAK
LFSYADGKDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGDPVEDSDA
KTVLESVASFCILFGVIGFVAGVVGFVLVALWSISGERQALRMRREYVKC
ILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALL
ATGIIINWELGLVMLACVPFIGGSVAVLSALMSSSTQEGNDHYSKAGGVA
TERSQLIGPGGSWSINSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
IPR036640ABC1_TM_sf