prot_Ecto-sp13_S_contig6320.17065.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6320.17065.1
Unique Nameprot_Ecto-sp13_S_contig6320.17065.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length254
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6320.17065.1 vs. uniprot
Match: D7G7Z2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z2_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 5.720e-21
Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0 
Query:  154 IGPKGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALHYTDSRRCKERIREAQRREERAAEAQRQLALEKKRNEANRRREQELLDRVDLRARARR 253
            IGPKGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALHYTDSRRCKERIREAQRREERAAEAQRQLAL+KKR++ NRRREQELLDRVDLRARARR
Sbjct:  413 IGPKGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALHYTDSRRCKERIREAQRREERAAEAQRQLALQKKRDDENRRREQELLDRVDLRARARR 512
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6320.17065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7Z2_ECTSI5.720e-2196.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..237
NoneNo IPR availablePFAMPF13637Ank_4coord: 4..43
e-value: 3.2E-7
score: 30.8
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 127..234
coord: 45..120
coord: 2..76
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 173..187
score: 36.05
coord: 23..38
score: 37.61
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 56..86
e-value: 410.0
score: 7.9
coord: 157..186
e-value: 0.068
score: 22.3
coord: 22..52
e-value: 0.0039
score: 26.4
coord: 90..119
e-value: 0.0062
score: 25.7
coord: 123..153
e-value: 4.3
score: 16.3
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 60..88
e-value: 0.029
score: 14.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 22..45
score: 9.164
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 157..189
score: 11.968
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 90..122
score: 10.846
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..74
e-value: 2.6E-19
score: 71.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 75..232
e-value: 3.5E-36
score: 126.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..205
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 95..188
e-value: 5.4E-14
score: 52.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..197
score: 45.174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6320contigEcto-sp13_S_contig6320:2..2061 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6320.17065.1mRNA_Ecto-sp13_S_contig6320.17065.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6320 2..2061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6320.17065.1 ID=prot_Ecto-sp13_S_contig6320.17065.1|Name=mRNA_Ecto-sp13_S_contig6320.17065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
ASIATVSRLLELGATVNATEKRKQTPLHCACERGRLDIVRFLVEKAGADS
RARAKVMHEPLHVACLGNWGQVVKFLLSEGNVDVEAADKNGMRSLHLAVQ
RNRLEAIRELLKHGCDVEATMPDGLTRPLHMACASGYEKAATLLLDHHAD
IGAIGPKGHRPLHLAAKEERAVIVELLIGRKADLHAKDDRGRDALHYTDS
RRCKERIREAQRREERAAEAQRQLALEKKRNEANRRREQELLDRVDLRAR
ARR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom