prot_Ecto-sp13_S_contig632.17063.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig632.17063.1
Unique Nameprot_Ecto-sp13_S_contig632.17063.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length188
Homology
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Match: D7FIJ0_ECTSI (Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ0_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 1.400e-128
Identity = 178/185 (96.22%), Postives = 180/185 (97.30%), Query Frame = 0
Query:    3 MAGSAPQEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYSVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVIESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSALHESTPSVWTEDAVNFYETFEPSAVETSK 187
            MAGSA +EYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRY VVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCV+ESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVS LHESTPSVWTEDAVNFYETFEPSAV T K
Sbjct:    1 MAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPSAVVTPK 185          
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Match: A0A7S2V2Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 7.850e-42
Identity = 73/174 (41.95%), Postives = 113/174 (64.94%), Query Frame = 0
Query:    9 QEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYSVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVIESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSALHESTPSVWTEDAVNFYETFEPSA 182
            +E+++T   ++V KK  +   + + + G++I+M GVIIRG+L ++ +GRY  VG  T+IRPA +I +E +     F  + +G +T IG+ C+IE+A IG NV+     VLG+ S VRD C L  GTVL  GAVVPPF+V+ GCP R+ S L E++P  ++  A + Y+ F+ +A
Sbjct:   10 EEFIRTTTNNLVSKKVRISSPNFVKITGKTILMHGVIIRGDLAKVEMGRYCEVGANTIIRPALKISEEPT-----FADVKIGDNTRIGEDCIIEAAWIGTNVQXXXXXVLGKGSLVRDCCRLEDGTVLAPGAVVPPFSVVAGCPGRVTSELPENSPEEFSHAAQDSYKKFKETA 178          
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Match: A0A7S3QBQ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBQ9_9STRA)

HSP 1 Score: 144 bits (363), Expect = 9.380e-40
Identity = 76/196 (38.78%), Postives = 115/196 (58.67%), Query Frame = 0
Query:    7 APQE--YVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYSVVGEGTVIRP-AYRI-------------EQEESNLKCRFTPLSVGSHTYIGKSCVIESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVS--ALHESTPSVWTEDAVNFYETFEPSAVE 184
            AP+E  YVKT   + V +KA +HG  N+ + G+SI+ P V IRG+ Q +RIGRY  +GEG+++RP +Y+              E EE     +F PL VGSHT IGK CVIE+A +G +V I D CV+ +   ++D C++  GTV+ +  V+PPF+ + GCP  M+    + ES  +   +D V  +  F  + ++
Sbjct:   41 APEEEGYVKTAAYNYVSRKAFIHGAKNVEMKGKSIVHPKVHIRGDFQTVRIGRYCHIGEGSILRPPSYQASLDTSHEGASENGENEEEKQLIKFLPLIVGSHTQIGKGCVIEAAAVGSSVYIGDNCVISKRVIIKDCCYIASGTVIAQDTVIPPFSRVAGCPGGMIENGLMAESITTTSVDDCVEQFNEFVKTMIQ 236          
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Match: A0A0L0DIQ2_THETB (Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIQ2_THETB)

HSP 1 Score: 140 bits (352), Expect = 9.240e-39
Identity = 67/174 (38.51%), Postives = 110/174 (63.22%), Query Frame = 0
Query:    8 PQEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYSVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVIESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSALHESTPSVWTEDAVNFYETFEPS 181
            P+E+++T  G+ V + + + G  N+ L G+S+++PG IIRG+L  +RIGRY V+ +  V+RPAY+   +  N    +  LS+G   Y+GK  V+E+A IG +V I +G ++ + + + D C +LPG V+PE AV+PPF++  G PA ++  L E+   V  E A   YE++ P+
Sbjct:    8 PEEWIETASGNKVSRASVLCGSQNIILNGKSLVLPGSIIRGDLAAVRIGRYCVISDRVVLRPAYKALPKGLN----YFQLSLGDCVYVGKDAVVEAASIGSHVIIGEGAIVSKRAVILDCCEILPGAVVPEDAVIPPFSIYGGNPAVLIGELTEAAQRVHEEKAFACYESYVPA 177          
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Match: A0A3S1H5M8_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1H5M8_ELYCH)

HSP 1 Score: 130 bits (328), Expect = 3.940e-35
Identity = 61/171 (35.67%), Postives = 102/171 (59.65%), Query Frame = 0
Query:   10 EYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYSVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVIESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSALHESTPSVWTEDAVNFYETFEP 180
            +Y++T  G+ V +++ + G  N+ + G++I+M G +IRG+L  +RIGR+ ++    VIRPA++      +    F PL +G H  I ++ V+ +A +G  V I   CV+GR + ++D C +   T+LP  AVVPPFT+  G P ++ S L + T  + T+  VN+Y  F P
Sbjct:   12 QYIETASGNKVSRQSVLCGSQNIVINGKTIVMTGCVIRGDLANVRIGRHCIISNNAVIRPAFK----RFSKGVAFFPLHIGDHVLIEENSVVNAAQVGSFVHIGKNCVIGRRAVLKDCCAIADNTILPPEAVVPPFTLCSGSPGKLTSELPDCTQDLMTDITVNYYHHFRP 178          
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Match: A0A0K0JQM9_BRUMA (BMA-DNC-5 n=14 Tax=Spiruromorpha TaxID=2072716 RepID=A0A0K0JQM9_BRUMA)

HSP 1 Score: 129 bits (325), Expect = 1.110e-34
Identity = 64/177 (36.16%), Postives = 101/177 (57.06%), Query Frame = 0
Query:   10 EYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYSVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVIESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSALHESTPSVWTEDAVNFYETFEPSAVETS 186
            EYV+T  G+ V +K+ + G  N+ L G+S +M   I+RG++  IR GRY VVGE T+IRP+Y+      +    F P+ +G H +IG  C++ +A IG  V          +  ++    +LP TV+P  AV+PPF+++ G P  ++  L EST  + T+   NFY+ F P +  +S
Sbjct:    8 EYVETATGNKVNRKSRLFGSQNIVLNGKSTLMKDCILRGDMHNIRTGRYCVVGERTIIRPSYK----RFSKGLTFFPVHIGDHVFIGNDCIVMAAEIGAFVHXXXXXXXXXSVIIKSCVQVLPNTVVPHDAVIPPFSIVGGNPGTVIGHLPESTQELMTQATRNFYDNFVPDSKNSS 180          
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Match: A0A0N4UWP5_ENTVE (Uncharacterized protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4UWP5_ENTVE)

HSP 1 Score: 126 bits (316), Expect = 2.590e-33
Identity = 63/171 (36.84%), Postives = 105/171 (61.40%), Query Frame = 0
Query:   12 VKTRDGDIVFKKA-HVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYSVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVIESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSALHESTPSVWTEDAVNFYETFEPS 181
            V+T  G+ V ++  H+ G  N+ L G+SIIM G I+RG+L  +RIG+Y V+GE ++IRP+++   +       + P+ +G + +I   CV+ +A IG  V I    ++GR++ ++D   +LP  V+P+ AV+PPF+++ G PA +V  L  ST  +  +   +FYE F PS
Sbjct:   14 VETATGNKVSRRGTHLFGSTNIVLSGKSIIMDGCILRGDLNSVRIGKYCVIGERSIIRPSFKAFSKGLT----YFPVHIGDYVFIENDCVVMAAQIGSFVHIGSNAIIGRSTVLKDCVQILPDAVIPQDAVIPPFSIVGGNPAVIVGELPPSTQDLMMQANKSFYENFVPS 180          
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Match: L8GIW5_ACACA (Dynactin 4 isoform 2, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIW5_ACACA)

HSP 1 Score: 125 bits (314), Expect = 8.960e-33
Identity = 63/171 (36.84%), Postives = 101/171 (59.06%), Query Frame = 0
Query:   10 EYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYSVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVIESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSALHESTPSVWTEDAVNFYETFEP 180
            E+++T  G+ V +K+ + G  N+ L G++++MPG +IRG+L  + +G+YSV+G   VIRPA++  Q        F P+++G   +I + C++ +  IG  V +  G VLGR+S ++D C +  G+VL  G VVPPFT+  G PA     L E    +  E ++  Y TF P
Sbjct:   16 EFIETHTGNKVGRKSILCGSQNIRLHGKTVVMPGAMIRGDLGAVNVGKYSVIGRNVVIRPAHKRYQGS----VAFFPVTIGDFVHIEEDCIVSATSIGSYVHVGRGAVLGRHSVLKDCCWVEEGSVLAPGTVVPPFTIFGGSPAVQKGQLPECFQEMQKEASLINYNTFLP 182          
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Match: A0A6P3X098_DINQU (dynactin subunit 5 n=9 Tax=Aculeata TaxID=7434 RepID=A0A6P3X098_DINQU)

HSP 1 Score: 124 bits (311), Expect = 1.340e-32
Identity = 63/174 (36.21%), Postives = 99/174 (56.90%), Query Frame = 0
Query:   10 EYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYSVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVIESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSALHESTPSVWTEDAVNFYETFEPSAV 183
            EYV+T  G+ V +   + G  N+ L G+ I+    IIRG+L  +R GRY ++ +  VIRP ++    + +    F PLS+G+H ++G+  V+ +A +GC V I    ++GR S ++D C++  G V+P   +VP FT   G PA  V  L E T  + T+   N+YE F P+ V
Sbjct:   12 EYVETASGNKVSRLTVLCGSQNIVLHGKVIVQSDAIIRGDLANVRTGRYCIISKNAVIRPPFK----KFSRGVAFFPLSMGNHVFVGERAVVNAALVGCYVYIGRNAIIGRRSVLKDCCYIEDGAVVPPETIVPSFTRFAGSPATCVEELPECTVDLMTDFTKNYYEHFLPARV 181          
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Match: A0A835Z209_9STRA (Dynactin 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z209_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.400e-32
Identity = 68/183 (37.16%), Postives = 96/183 (52.46%), Query Frame = 0
Query:    7 APQEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYSVVGEGTVIRPAYRIEQ-------EESNLKC----RFTPLSVGSHTYIGKSCVIESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSALHESTPSVWTEDAVNFYETF 178
            A ++YV+T   ++V +KA VHG  N+ + G+ I+MPGV + G+L  IR GRY +V EG+ IRP  R+EQ        ++N K       TP+ VG+HT+IG+ CV+E+A IGCNV + DGCV                           FT + G P   V  + ES   V  E A+ F+  F
Sbjct:    9 AAEDYVRTTTNNLVSRKATVHGPQNVSIKGKGIVMPGVTLHGDLATIRFGRYCLVDEGSTIRPGVRLEQGSGAAAAADANAKAAVTRHHTPMLVGNHTHIGRGCVVEAAAIGCNVTVGDGCVXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRVHGKPGLAVGEVPESFAVVQPERAIAFFNNF 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig632.17063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIJ0_ECTSI1.400e-12896.22Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A7S2V2Q0_9STRA7.850e-4241.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3QBQ9_9STRA9.380e-4038.78Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A0L0DIQ2_THETB9.240e-3938.51Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC... [more]
A0A3S1H5M8_ELYCH3.940e-3535.67Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A0K0JQM9_BRUMA1.110e-3436.16BMA-DNC-5 n=14 Tax=Spiruromorpha TaxID=2072716 Rep... [more]
A0A0N4UWP5_ENTVE2.590e-3336.84Uncharacterized protein n=1 Tax=Enterobius vermicu... [more]
L8GIW5_ACACA8.960e-3336.84Dynactin 4 isoform 2, putative n=1 Tax=Acanthamoeb... [more]
A0A6P3X098_DINQU1.340e-3236.21dynactin subunit 5 n=9 Tax=Aculeata TaxID=7434 Rep... [more]
A0A835Z209_9STRA1.400e-3237.16Dynactin 4 n=1 Tax=Tribonema minus TaxID=303371 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10coord: 16..184
e-value: 2.5E-40
score: 139.5
NoneNo IPR availablePANTHERPTHR46126:SF1DYNACTIN SUBUNIT 5coord: 8..181
NoneNo IPR availablePANTHERPTHR46126FAMILY NOT NAMEDcoord: 8..181
IPR001451Hexapeptide repeatPFAMPF00132Hexapepcoord: 92..125
e-value: 1.1E-5
score: 24.9
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 14..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig632contigEcto-sp13_S_contig632:15344..18109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig632.17063.1mRNA_Ecto-sp13_S_contig632.17063.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig632 15267..18694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig632.17063.1 ID=prot_Ecto-sp13_S_contig632.17063.1|Name=mRNA_Ecto-sp13_S_contig632.17063.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=188bp
MAMAGSAPQEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGEL
QEIRIGRYSVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCV
IESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQG
CPARMVSALHESTPSVWTEDAVNFYETFEPSAVETSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001451Hexapep
IPR011004Trimer_LpxA-like_sf