mRNA_Ecto-sp13_S_contig6305.17049.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Match: D7FXF8_ECTSI (NAD(P)H dehydrogenase (Quinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF8_ECTSI) HSP 1 Score: 502 bits (1292), Expect = 3.920e-177 Identity = 244/258 (94.57%), Postives = 246/258 (95.35%), Query Frame = 3
Query: 57 MSGPAASVSRRKPLPSLLAGAMRALNRVTSFVPPPPSDKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGKVTEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRKAGYCTIRINVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 830
MSGPAASVSRR+PL SLLAGAMRALNRVTSFVPPPPS KDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDG+V EDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRK VGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF
Sbjct: 1 MSGPAASVSRRQPLSSLLAGAMRALNRVTSFVPPPPSGKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRK---------VGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 249
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Match: A0A835ZJZ3_9STRA (NAD(P)H dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJZ3_9STRA) HSP 1 Score: 242 bits (618), Expect = 6.350e-75 Identity = 118/247 (47.77%), Postives = 165/247 (66.80%), Query Frame = 3
Query: 90 KPLPSLLAGAMRALNRVTSFVPPPPSDKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGKVTEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRKAGYCTIRINVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 830
+PL SL ALN+ + PP + DG +++++++ HP + S++ AL +AV +LKD GH VRV +LY E F+AAL +E R +MTA+R+G + V HV+ L+W GLV YPTWWY+ PAILKGW DR L PG FD+P+G +P TG ISRLTNI++ +G+V+T+GN + +V+YVGDPGRR++SRGLR + HP+C++LW GL+ VE C + RSAFLE V + F F
Sbjct: 15 RPLRSLPGPFSLALNKCSCHFPPA-RNADGGEQRVLLLYAHPVHEGSSYSCALRDAVVSALKDRGHDVRVADLYAEGFEAALSAEELRTYMTAYREGALAPAVAAHVESLRWAQGLVFVYPTWWYTPPAILKGWFDRCLCPGATFDMPDGTTPTNPNTGVISRLTNIKR---------IGVVSTYGNQWQHVQYVGDPGRRLISRGLRAICHPDCSVLWLGLHGVETCAQERRSAFLEHVRQEFSWF 251
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Match: W7TIP7_9STRA (Nad h dehydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIP7_9STRA) HSP 1 Score: 201 bits (510), Expect = 9.930e-59 Identity = 106/251 (42.23%), Postives = 144/251 (57.37%), Query Frame = 3
Query: 93 PLPSLLAGAMRALNRVTSFVPPPPSDKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRD--GKVTEDVKG---HVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRKAGYCTIRINVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 830
PL LA A NR TSF+PPPP +++++ HP G SF A E SL++AGH+V+ +LY+E FQ + + R +M D + T D ++D L+WC L+ YPTWWY+ PAILKGW+DRT +P AF LP P G + L NI+K VG+VTT+G+S+ +RYVGDPGRRI++RGLRPLF +CTLLW G+Y + +R FL +V R+F
Sbjct: 15 PLSRFLASAA---NRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTS-SFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKK---------VGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Match: A0A7S0LIU4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIU4_9EUKA) HSP 1 Score: 170 bits (430), Expect = 6.200e-47 Identity = 88/236 (37.29%), Postives = 133/236 (56.36%), Query Frame = 3
Query: 129 LNRVTSFVPPPPSDKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEH-RGFMTAFRDGKVTEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGV--AFDLPNGVEKPHPKTGFISRLTNIRKAGYCTIRINVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRD 827
LN++TS VPPPP ++ + I+++ HP S++ AL +AV + GH++R LY E FQ+A+ E + F A + ++ DV+ H+ DL+W +V YPTWW++ PA+LKG+ DRTL+PG A+D P +P G + LTNI++ + V+T+G GD GR +S +RP+F P+CT LW GLY ++ C +DRS F V + RD
Sbjct: 20 LNKLTSHVPPPPREEGKCKRHILLIHAHPRAD--SYSTALADAVHEGAVAGGHELRRRTLYAEGFQSAMTDSERGKYFDVASGESRIQGDVRSHLADLRWADSIVFVYPTWWFNMPAMLKGYFDRTLVPGPGGAWDFPGSGGEP-ASNGLVPYLTNIKR---------IAAVSTYGAPRHITFLAGDNGRNTISTAIRPIFDPQCTCLWLGLYSMDDCTKEDRSRFAVRVRETIRD 243
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Match: UPI00122F4783 (NAD(P)H-dependent oxidoreductase n=1 Tax=Roseibium aestuarii TaxID=2600299 RepID=UPI00122F4783) HSP 1 Score: 166 bits (420), Expect = 4.230e-46 Identity = 83/214 (38.79%), Postives = 121/214 (56.54%), Query Frame = 3
Query: 189 KIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGKVTEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRKAGYCTIRINVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 830
K +VV HP + SF +L + V ++L+DAGH +RV +LY E FQ + E RG+ F + + VK HV+D+ WC L+ YPTWWY PA+LKGWLDR +P V F++P+ PK + +IRK +G+VTT G S+W + +G+PGR+ + RG+R L HP C L+ Y ++ PQ R +L V + + F
Sbjct: 2 KTLVVYCHPC--EESFNASLRDTVLETLRDAGHAIRVRDLYGEAFQPVMSAAERRGYHDEFDN---VQPVKDHVEDILWCESLIFVYPTWWYGLPAMLKGWLDRVWVPHVTFEMPSETRSARPK------MQHIRK---------LGVVTTCGASWWLSKVIGEPGRKTLLRGMRTLCHPACKTLYMAHYKMDSSTPQSRETYLAKVRQRLKSF 195
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Match: A0A7S0J3Q7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J3Q7_9EUKA) HSP 1 Score: 163 bits (412), Expect = 2.370e-44 Identity = 90/231 (38.96%), Postives = 130/231 (56.28%), Query Frame = 3
Query: 129 LNRVTSFVPPPPSDKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRG--FMTAFRDGKVTEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGV--AFDLPNGVEKPHPKTGFISRLTNIRKAGYCTIRINVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDV 809
LNR+TS VPPPP+++ +I+++ HP SF++AL +AV+ D GH++R +LY E FQ AL E RG F A ++ DV+ +DDL+W LV YPTWW++ PA+LKG+ DR L+PG A+D P + G LTN+++ V V+T+G GD GR +S +RPLF P+CT LW GLY ++ C ++R+ F V
Sbjct: 14 LNRLTSHVPPPPAEEGSGPRRILLIHAHPRAD--SFSMALADAVQAGAVDGGHELRRRSLYAENFQPALTSSE-RGVYFDGAGGAARLASDVRSQLDDLRWADSLVFVYPTWWFNLPAMLKGYFDRVLVPGPEGAWDFPAS-GRSLAANGLAPNLTNVKR---------VCAVSTYGAPRHIAFLAGDNGRNTISTAIRPLFDPQCTCLWLGLYSMDACSREERTQFAAHV 231
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Match: A0A7S0VN59_9CRYP (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VN59_9CRYP) HSP 1 Score: 158 bits (400), Expect = 1.900e-42 Identity = 85/252 (33.73%), Postives = 138/252 (54.76%), Query Frame = 3
Query: 129 LNRVTSFVPPPPSDKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGF-----MTAFRDGKVTEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPK--------------TGFISRLTNIRKAGYCTIRINVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRD 827
LN ++S+VP PP + +GV+ +I++V HP D SF+ +L +A+ + + GH+ + ++Y+ F + ++ +G+ A ++ +T DV+G + L+WC +V CYPTWW + PA +KG+ DRTL+PG + P P P+ TG + RLTNI++ V V+T+G S V GD GR ++ +RPLF +CT W GLY+++ P+ + FL +V R RD
Sbjct: 14 LNMLSSYVPAPPRE-EGVKRRILLVHAHP--VDESFSCSLAKAIEEGAAEGGHEFKKIDIYRSGFNPIMSAKDRKGYYDNVDFDASKEAALTSDVRGAIAALRWCDSVVFCYPTWWMNTPAAMKGFFDRTLIPGSTWTFP-----PKPEGSVSLVPGFMNSGATGLVPRLTNIKR---------VYGVSTYGASQSIVTVAGDNGRNMICTAIRPLFARDCTCGWAGLYNMDFVSPEGKKEFLANVKRIIRD 248
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Match: A0A6N6VDW8_9HYPH (Flavodoxin family protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VDW8_9HYPH) HSP 1 Score: 156 bits (394), Expect = 2.960e-42 Identity = 81/204 (39.71%), Postives = 116/204 (56.86%), Query Frame = 3
Query: 189 KIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGKVTEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRKAGYCTIRINVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFL 800
K++VV HP + SF AL + V D+LK GH VR+T+LY E F LG QE R + T +GK V H+ ++QW L+ +PTWWY PA+LKGWLDR +PGV+F +P G + + LTN++ VG +TT G+ +W ++ VG+P RR + RG+R HP C LW Y ++ P+ R ++L
Sbjct: 2 KVLVVYSHPVPE--SFCAALRDTVVDALKAKGHDVRLTDLYAENFDPRLGCQERRDYHT---EGKNLTYVPEHIANIQWAEALIFVFPTWWYGLPAMLKGWLDRVFVPGVSFTMPKG------QMPIMPALTNVKL---------VGGITTCGSPWWWMKIVGEPHRRTLLRGIRGSCHPRCKTLWMAHYRMDSSTPESRKSYL 185
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Match: R1D2I0_EMIHU (NAD(P)H dehydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D2I0_EMIHU) HSP 1 Score: 157 bits (398), Expect = 3.630e-42 Identity = 85/245 (34.69%), Postives = 136/245 (55.51%), Query Frame = 3
Query: 129 LNRVTSFVPPPPSDKDGVQE-KIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFR--DGKVTEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGV--------AFDLPNGVEKPHPKTG-FISRLTNIRKAGYCTIRINVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRD 827
LN VT+ VPPPP D V++ KI++V HP + S++ AL +AV K+ GH +R +LY+E+F + E ++ F ++ DV+ H+DDL+W +V YPTWW++ PA+LKG++DR ++P AF N K +G + LTN+++ V ++T+G+ + GD GR ++ G+R LF P CT+LW GLY ++ C + R+ F++ V + RD
Sbjct: 14 LNWVTTQVPPPPRSPDDVEKRKILLVHAHP--RTDSYSHALADAVEAGAKEGGHTIRRRDLYKERFSPVMTAAERGAYLRDFDMVPKRLASDVRSHLDDLRWADSVVFVYPTWWFNVPAMLKGYIDRVMVPATPGSGQGAWAFPDSNIQGKASIGSGGLVGHLTNVKR---------VAGISTYGSERYMGLLAGDNGRNMIGTGVRALFDPSCTVLWMGLYSLDFCSDEQRADFIDKVRETIRD 247
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Match: A0A7X4DQ99_9RHOB (NAD(P)H-dependent oxidoreductase n=1 Tax=Boseongicola sp. SB0675_bin_26 TaxID=2604849 RepID=A0A7X4DQ99_9RHOB) HSP 1 Score: 155 bits (391), Expect = 9.230e-42 Identity = 85/213 (39.91%), Postives = 126/213 (59.15%), Query Frame = 3
Query: 189 KIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGKVTEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNG-VEKPHPKTGFISRLTNIRKAGYCTIRINVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFR 824
+++VV HP+ + SF AL E +L+ AGH+VRV +LY+E F+ L QE ++ R + + HVDDLQW GLV+ YPTW+Y PA+LKGWL+R +PGVAF++ + +++P K G +R+ VG +TT G+ +W +R + DPGR + +RGLRPLF P C + W L+D+ DR+ FL V R+ +
Sbjct: 2 RLLVVFCHPSRE--SFGAALFETACRTLRAAGHEVRVHDLYREGFEPVLSEQEWSDYLPRTRT--IIDKHPDHVDDLQWAEGLVVIYPTWFYGPPAMLKGWLERVWLPGVAFEVADARLKRPKGKLG--------------NVRLFVG-ITTSGSPWWWLRLIRDPGRSLWTRGLRPLFSPNCRVTWLQLHDMNNSTENDRTGFLARVERTLQ 195 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6305.17049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6305.17049.1 >prot_Ecto-sp13_S_contig6305.17049.1 ID=prot_Ecto-sp13_S_contig6305.17049.1|Name=mRNA_Ecto-sp13_S_contig6305.17049.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=259bp MSGPAASVSRRKPLPSLLAGAMRALNRVTSFVPPPPSDKDGVQEKIVVVQback to top mRNA from alignment at Ecto-sp13_S_contig6305:87..3262+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6305.17049.1 ID=mRNA_Ecto-sp13_S_contig6305.17049.1|Name=mRNA_Ecto-sp13_S_contig6305.17049.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3176bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6305:87..3262+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6305:87..3262+ >mRNA_Ecto-sp13_S_contig6305.17049.1 ID=mRNA_Ecto-sp13_S_contig6305.17049.1|Name=mRNA_Ecto-sp13_S_contig6305.17049.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=777bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6305:87..3262+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |