mRNA_Ecto-sp13_S_contig6287.17027.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6287.17027.1
Unique NamemRNA_Ecto-sp13_S_contig6287.17027.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Match: D7FIC1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIC1_ECTSI)

HSP 1 Score: 730 bits (1884), Expect = 1.340e-261
Identity = 406/466 (87.12%), Postives = 415/466 (89.06%), Query Frame = 1
Query:    1 GAAVVAAPRLLAFHVPPAPSGLCASASTSNRWRAVSPAGGGGRAGKAGLVALGKGLGCSLRARPGWCTRSFSSRLGVSAGDGDASSPPPPSLQNIPHTSLVLRDEATGCDIYLVGCLHGSYASGRDVQDVLEKVRPGAVVLELCESRHKALRRDLEKSAKGDAPLEGKAKWVSAFSSWAKGVKKTSAKSGLLQGILSGLLSAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGAARGMVTSAAGGRAGPGECSVVLGDRDVQETLRRLGGALTALTGRGEGGDEKHGGGRGEGAPEGALPGAGGGGVGVGMLDAAETEATSGWNWGTLASDARILRVAVVGPSGRQWPDSLNVLDTVWRERQALGMLLLPLLLPITVVSEALQRSIGGVATVTAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVDVDLGRLLEGASDVLDALLVALSVWYMLRFFR 1398
            GAA+VAAPRLLAFHVPPAP GLCASASTSNRWRAVS AGGGGRAGKAGL ALGKGLGCSLRARPGWCTRSFSSRLG SAG+G+ASSPPPPSLQNIPHTSLVLRDEATGCDIYLVGCLHGS+ASGRDVQDVLEKVRPGAVVLELCESRHKALRRDLEK AKGDAPLEGK +W SAFSSWAKGVKKTSAKSGL+QGILSGLLSAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTG ARGMV+ AAGG AGPGECSVVLGDRDVQETLRRLGGALTALTGRGEGGDEKHG G              GGGV VG LDAAETEATSGWNWGTLASDARI+RVAVVGPSGRQWPDSLNVLDTVWRERQALGMLLLPLLLP+ VVSE LQRSIGGVAT T AAS            XXXXXXXXXXXXXX     AAVDVDLGRLLEG SDVLD LLV LSVWYMLRFFR
Sbjct:    8 GAAIVAAPRLLAFHVPPAPGGLCASASTSNRWRAVSSAGGGGRAGKAGLAALGKGLGCSLRARPGWCTRSFSSRLGASAGNGNASSPPPPSLQNIPHTSLVLRDEATGCDIYLVGCLHGSHASGRDVQDVLEKVRPGAVVLELCESRHKALRRDLEKRAKGDAPLEGKERWASAFSSWAKGVKKTSAKSGLVQGILSGLLSAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGVARGMVSPAAGGGAGPGECSVVLGDRDVQETLRRLGGALTALTGRGEGGDEKHGVGXXXXXXXXXXXXXXGGGVSVGTLDAAETEATSGWNWGTLASDARIVRVAVVGPSGRQWPDSLNVLDTVWRERQALGMLLLPLLLPMMVVSETLQRSIGGVATATVAASGSGGGALRGFGAXXXXXXXXXXXXXXVGGGVAAVDVDLGRLLEGTSDVLDTLLVVLSVWYMLRFFR 473          
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Match: A0A835YJK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJK9_9STRA)

HSP 1 Score: 125 bits (314), Expect = 6.270e-28
Identity = 106/296 (35.81%), Postives = 146/296 (49.32%), Query Frame = 1
Query:  349 LHGSYASGRDVQDVLEKVRPGAVVLELCESRHKALRRDL--EKSAKGDAPLEGKAKWVSAFSSWAKGVKKTSAKSGLLQGILSGLLSAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGAARGMVTSAAGGRAGPGECSVVLGDRDVQETLRRLGGALTALTGRGEGGDEKHGGGRGEGAPEGALPGAGGGGVGVGMLDAAETEATSGWNWGT-------LASDARILRVAVVGPSGRQWPDSLNVLDTV-WRER--QALGMLLLPLLLPITVVSEALQRSIGGVATVTAAAS 1200
            + GS  S RDV++V+ +  PGAVVLELCESR KAL R+L  E+S K +  +E   +  +    W +G+K T  K GLLQ + +GL+S+ Y+ Q+L +FDPG EFKTAM  ++           ARG+               +VLGDRD+ ETL RL G                   +G+ AP+   P A               +A   W+          L  DAR+LR+AV G SG+QWP +LNV   + WR    + L  LL PL   I V++ A +  +GG      A S
Sbjct:    1 MQGSPTSSRDVENVINESSPGAVVLELCESRFKALSRELAAEQSVKEETEVE---RIHAVLGGWVRGLKSTQQKKGLLQALTAGLVSSGYLWQKLNNFDPGCEFKTAMALSN-----------ARGI--------------DIVLGDRDINETLGRLNGKNK----------------QGKRAPK-LQPNA--------PPPPPLLKAKKRWSVDRSLAYVRGLGRDARVLRLAVAGESGQQWPAALNVPRCIFWRGDVLKDLFGLLAPLTAGIYVMAGAFEMGVGGAIAAAHAIS 243          
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Match: A0A7S0ZFW7_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFW7_9RHOD)

HSP 1 Score: 73.9 bits (180), Expect = 1.280e-10
Identity = 57/193 (29.53%), Postives = 89/193 (46.11%), Query Frame = 1
Query:  280 NIPHTSLVLRDEATGCDIYLVGCLHGSYASGRDVQDVLEKVRPGA---VVLELCESRHKALRR----DLEKSAKGDAPLEGKAKWVSAFSSWAKGVKKTSAKSGLLQGILSGLLSAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGAARGMVTSAAGGRAGPGECSVVLGDRDVQETLRRLGGALTALT 837
            ++P T + L D  +GCDI ++GC+HGS+ S  DV+ V E  +  +   VVLELC+ R K LR     D +K+     PL    K++  F              G+  GIL+ +LS+ Y +      +PG+EF+ A+ YA    RP                         ++ GD    +T+RRL  +++  T
Sbjct:   54 DLPSTVVHLHDSKSGCDILVIGCVHGSFQSAADVEKVFELTQHASHTSVVLELCDQRLKTLRAPVVSDSKKNRNHKLPLN---KYIRNF-------------GGIGPGILAFILSSFYRIHTAIGLEPGIEFRAAVEYAKS--RP----------------------NSVLICGDATAVQTIRRLYSSMSPAT 206          
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Match: A0A7S0BC06_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BC06_9RHOD)

HSP 1 Score: 71.2 bits (173), Expect = 8.330e-10
Identity = 63/194 (32.47%), Postives = 91/194 (46.91%), Query Frame = 1
Query:  259 PPPPSLQNIPHTSLVLRDEATGCDIYLVGCLHGSYASGRDVQDVLEKVRPG--AVVLELCESRHKALRRDLEKSAKGDAPLEGKAKWVSAFSSWAKGVKKTSAKSGLLQGILSGLLSAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGAARGMVTSAAGGRAGPGECSVVLGDRDVQETLRRLGGALTAL 834
            PP   L+ +   S+V RDE +G D+Y+VGC+HG  +S RDV+ V   V     AV++ELCE R     R + K  K  +  + + K  + FS     V+      G    +++ +L     +Q+L  F+PGLEF  A   AD + R G                        +VLGDR   ET++RL  AL  L
Sbjct:   35 PPDDKLRRLGSVSVV-RDEKSGVDVYVVGCVHGFRSSVRDVETVAACVTSPLRAVMIELCEDRW----RVISKLTKDKSSSKLQQKSFNLFSL----VRALGRFGGSGPALVAAVLVGISNIQKLSGFEPGLEFVCA---ADEAKRVG----------------------AKLVLGDRPANETIQRLSKALNPL 194          
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Match: A0A7S3ED37_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ED37_9RHOD)

HSP 1 Score: 70.9 bits (172), Expect = 1.110e-9
Identity = 59/194 (30.41%), Postives = 90/194 (46.39%), Query Frame = 1
Query:  259 PPPPSLQNIPHTSLVLRDEATGCDIYLVGCLHGSYASGRDVQDVLEKVRPG--AVVLELCESRHKALRRDLEKSAKGDAPLEGKAKWVSAFSSWAKGVKKTSAKSGLLQGILSGLLSAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGAARGMVTSAAGGRAGPGECSVVLGDRDVQETLRRLGGALTAL 834
            PP   ++ +   S+V RDE +G D+Y+VGC+HG  +S RD++ V   V     AV++ELCE R + + +  +       P E      + F+      +   +   L+  +L G+ S    +Q+L  F+PGLEF  A   AD + R G                        +VLGDR   ET++RL  AL  L
Sbjct:   35 PPGDKVRKLGSVSVV-RDEKSGVDVYVVGCIHGFRSSVRDIETVAGSVTSPLRAVMIELCEDRWRVISKLTKDKRSKKLPEEN----FNLFTLLQTPARLGGSGPALVGAVLVGISS----IQKLSGFEPGLEFVCA---ADEARRVG----------------------AKLVLGDRPANETIQRLSKALDPL 194          
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Match: A0A7S4K8X1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K8X1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.680e-9
Identity = 65/207 (31.40%), Postives = 92/207 (44.44%), Query Frame = 1
Query:  274 LQNIPHTSLVLRDEATGCDIYLVGCLHGSYASGRDVQDVLEKV-RPGAVVLELCESRHKALRRDLEKSAKGDAPL---------EGKAKWVSAFSSWAKG-------VKKTSAKSGLLQGILSGLLSAPYVVQR-LGDFDPGLEFKTAMVYADPSVRPGYSTGAARGMVTSAAGGRAGPGECSVVLGDRDVQETLRRLGGALTALTG 840
            L+     +L + D AT   + LVGCLHGS +S  DVQ  +E       VVLELC +R   +R ++   +   A L         +G          WA G       V++T+ K G+   + +  L      Q  L  F+PG EF+ AM      V  G S     G +    G  AG     ++L D+ V ETLRR+G  L A++G
Sbjct:  122 LRGSDDPALEIIDPATNVTVVLVGCLHGSLSSSSDVQRAIEDAPSTDVVVLELCAARFADVRNEVRSRSSSSALLGGEEMSDYLDGSESGFGGMRGWAAGLPLFLGAVRRTAEKRGMAAAVAALALGTVSGTQAALSGFEPGREFRVAM----ECVVEGRS-----GCIAGN-GEMAGGETVDIILADKTVDETLRRVGN-LPAVSG 317          
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Match: A0A482VZR3_9CUCU (TraB domain-containing protein n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482VZR3_9CUCU)

HSP 1 Score: 66.6 bits (161), Expect = 3.030e-8
Identity = 63/188 (33.51%), Postives = 86/188 (45.74%), Query Frame = 1
Query:  280 NIPHTSLVLRDEATGCDIYLVGCLHGSYASGRDVQDVLEKVRPGAVVLELCESRHKALRRDLEKSAKGDAPLEGKAKWVSAFSSWAKGVKKTSAKSGLLQGILSGLL--SAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGAARGMVTSAAGGRAGPGECSVVLGDRDVQETLRRLGGALTALT 837
            N+P T  +L+ EATG  +YLVG  H S  S  DV  V++ + P  VVLELC SR   L  D EK+   +A     +K ++   S           SGL  GI+  LL   + ++ + LG   PG EF+ A  Y +    P                       C V+LGDR +  TL+R   AL+ LT
Sbjct:   56 NLPETVTLLKHEATGAKVYLVGTAHFSNESKEDVIKVIQNILPHVVVLELCSSRTNILSLD-EKTILDEAKNIDLSKIITNIRS-----------SGLYNGIMYILLLNMSAHITKELG-MAPGGEFRAA--YREAEKVP----------------------NCEVLLGDRPLGITLQR---ALSKLT 203          
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Match: A0A090M7F3_OSTTA (Pheromone shutdown, TraB n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M7F3_OSTTA)

HSP 1 Score: 65.9 bits (159), Expect = 3.080e-8
Identity = 54/176 (30.68%), Postives = 79/176 (44.89%), Query Frame = 1
Query:  292 TSLVLRDEATGCDIYLVGCLHGSYASGRDVQDVLEKVRPGAVVLELCESRHKALRRDLEKSAKGDAPLEG-KAKWVS-AFSSWAKGVKKTSAKSGLLQGILSGLLSAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGAARGMVTSAAGGRAGPGECSVVLGDRDVQETLRRL 813
            T  VLR      +IYLVG  H S  S ++V +++ +VRP  V +ELC+ R   +R  + K  +G+   EG  +++V  A   +            +  G+L   +   Y   RL   +PG EFK A+  A+       + GA                   VV  DRDV+ETLRRL
Sbjct:   34 TVSVLRSSTCEREIYLVGTAHVSEKSAQEVAELVRRVRPTVVAVELCDERLATMRETIAKERRGEKKGEGGTSEFVRRAVRDFFGAFTGARGPGNVADGLLGAAMKTFYGFFRLSGLEPGKEFKEAVKEAE-------ALGA------------------QVVCADRDVRETLRRL 184          
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Match: D6WMS0_TRICA (TraB domain-containing protein-like Protein n=2 Tax=Tribolium TaxID=7069 RepID=D6WMS0_TRICA)

HSP 1 Score: 66.2 bits (160), Expect = 3.960e-8
Identity = 65/188 (34.57%), Postives = 84/188 (44.68%), Query Frame = 1
Query:  280 NIPHTSLVLRDEATGCDIYLVGCLHGSYASGRDVQDVLEKVRPGAVVLELCESRHKALRRDLEKSAKGDAPLEGKAKWVSAFSSWAKGVKKTSAKSGLLQGILSGLL--SAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGAARGMVTSAAGGRAGPGECSVVLGDRDVQETLRRLGGALTALT 837
            N+P T  +L+ EATG  +YLVG  H S  S  DV  V+  + P AVVLELC SR   L  D EK+   +A      K V+   S           SGL  GI+  LL   + ++ + LG   PG EF+ A  Y +    P                       C V+LGDR +  TL R   AL+ LT
Sbjct:   56 NLPETVTLLKHEATGAKVYLVGTAHFSNESKEDVIKVIRNILPHAVVLELCASRTNILSLD-EKTILEEAKNIDLQKIVNNIKS-----------SGLYNGIMYILLLNMSAHITKELG-MAPGGEFRVA--YQEAEKIP----------------------NCEVLLGDRPLGITLHR---ALSKLT 203          
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Match: A0A7S0KB33_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KB33_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.220e-7
Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 1
Query:  304 LRDEATGCDIYLVGCLHGSYASGRDVQDVLEKVRPGAVVLELCESRHKALRRDLEKSAKGDAPLEGKAKWVSAFSSWAKGVKKTSAKSGLLQGILSGLLSAPYVVQRL 627
            L   +TGC++ LVG +HGS +S  DV   LE+     VVLELC SR   +RRD+E +  GD  +    K       +   V  T  + GL  GI + ++    +VQ +
Sbjct:  101 LTHPSTGCNVTLVGVVHGSASSSNDVAKTLERKDVDVVVLELCASRFADMRRDMELNTSGDDGMYMPQKLNQTMDKFLNLVAMTVDRKGLASGIATFIIGGVSLVQSI 208          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6287.17027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FIC1_ECTSI1.340e-26187.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YJK9_9STRA6.270e-2835.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0ZFW7_9RHOD1.280e-1029.53Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S0BC06_9RHOD8.330e-1032.47Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3ED37_9RHOD1.110e-930.41Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S4K8X1_9STRA2.680e-931.40Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A482VZR3_9CUCU3.030e-833.51TraB domain-containing protein n=1 Tax=Asbolus ver... [more]
A0A090M7F3_OSTTA3.080e-830.68Pheromone shutdown, TraB n=1 Tax=Ostreococcus taur... [more]
D6WMS0_TRICA3.960e-834.57TraB domain-containing protein-like Protein n=2 Ta... [more]
A0A7S0KB33_9STRA1.220e-735.19Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6287contigEcto-sp13_S_contig6287:687..4892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score737.3
Seed ortholog evalue4.5e-210
Seed eggNOG ortholog2880.D7FIC1
Model size1401
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs2SW75@2759,COG1916@1
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_001340.1
Cds size1401
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6287.17027.1prot_Ecto-sp13_S_contig6287.17027.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6287 687..4892 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463873.1901283-CDS-Ecto-sp13_S_contig6287:686..9921681463873.1901283-CDS-Ecto-sp13_S_contig6287:686..992Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6287 687..992 -
1681463873.2019506-CDS-Ecto-sp13_S_contig6287:1239..13771681463873.2019506-CDS-Ecto-sp13_S_contig6287:1239..1377Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6287 1240..1377 -
1681463873.2120981-CDS-Ecto-sp13_S_contig6287:2216..25941681463873.2120981-CDS-Ecto-sp13_S_contig6287:2216..2594Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6287 2217..2594 -
1681463873.2221816-CDS-Ecto-sp13_S_contig6287:2826..29251681463873.2221816-CDS-Ecto-sp13_S_contig6287:2826..2925Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6287 2827..2925 -
1681463873.23821-CDS-Ecto-sp13_S_contig6287:3821..39621681463873.23821-CDS-Ecto-sp13_S_contig6287:3821..3962Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6287 3822..3962 -
1681463873.2594488-CDS-Ecto-sp13_S_contig6287:4223..42831681463873.2594488-CDS-Ecto-sp13_S_contig6287:4223..4283Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6287 4224..4283 -
1681463873.2736402-CDS-Ecto-sp13_S_contig6287:4613..48921681463873.2736402-CDS-Ecto-sp13_S_contig6287:4613..4892Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6287 4614..4892 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6287.17027.1

>prot_Ecto-sp13_S_contig6287.17027.1 ID=prot_Ecto-sp13_S_contig6287.17027.1|Name=mRNA_Ecto-sp13_S_contig6287.17027.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=467bp
GAAVVAAPRLLAFHVPPAPSGLCASASTSNRWRAVSPAGGGGRAGKAGLV
ALGKGLGCSLRARPGWCTRSFSSRLGVSAGDGDASSPPPPSLQNIPHTSL
VLRDEATGCDIYLVGCLHGSYASGRDVQDVLEKVRPGAVVLELCESRHKA
LRRDLEKSAKGDAPLEGKAKWVSAFSSWAKGVKKTSAKSGLLQGILSGLL
SAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGAARGMVTSAAGGRA
GPGECSVVLGDRDVQETLRRLGGALTALTGRGEGGDEKHGGGRGEGAPEG
ALPGAGGGGVGVGMLDAAETEATSGWNWGTLASDARILRVAVVGPSGRQW
PDSLNVLDTVWRERQALGMLLLPLLLPITVVSEALQRSIGGVATVTAAAS
GSGGGGVRGFGAFGGVSGVNSAGSAGGGGGGAAVDVDLGRLLEGASDVLD
ALLVALSVWYMLRFFR*
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mRNA from alignment at Ecto-sp13_S_contig6287:687..4892-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6287.17027.1 ID=mRNA_Ecto-sp13_S_contig6287.17027.1|Name=mRNA_Ecto-sp13_S_contig6287.17027.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4206bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6287:687..4892- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTGCTGCGGTTGTCGCAGCCCCGAGACTGCTCGCTTTCCACGTCCCGCC TGCTCCGAGTGGCCTTTGCGCTTCTGCGAGCACCAGCAACCGATGGCGGG CTGTATCTCCCGCGGGCGGTGGCGGCAGGGCGGGGAAAGCAGGACTTGTC GCCTTGGGGAAGGGCTTGGGTTGTAGTTTGCGAGCTAGGCCAGGCTGGTG CACACGCTCCTTTTCGTCGCGGCTGGGTGTTTCGGCAGGAGACGGCGACG CTTCTTCTCCGCCACCACCATCGCTGCAGGTATGCGTAGTTGCTGCTGCT GAAGTCGCGAGTTAGTACTATACACAGAAATGGTTTCTGTTTTGCGTTGA CCAGCATGATTGATGTGTGTTGCGAACGCCGTTTGTCTCACGCAGAAATT GTCGTGCTCGCTAAGTTTCCGCCGGGTTCTTTTGACGAAACTCCTTGTTT TAGTCTGCTGCTCTGCGCCCTGCCTACCCCCTCTCCCGTGCACAAACAGC TAAACCTCGTCCGACTGGGCCGCGGCACGCGGTCGCCATAAACGCCGACG CGCTCAGCTCATCTCGGTCTAACCTTCCTGTGTACGCCCGATGTTTCCGC CATCCGCAGAACATCCCGCACACCTCTCTAGTGCTGAGGGACGAAGCCAC AGGCTGCGACATTTACCTGGTGAGAGAAGGCCTACTCCTGCTTATCGTCT CGGTTGCTGTTTCCTTGTGGTAGGTCGTGATGCTGCTGCGGTGGCGGCGA CTGTTGTCTTCAGTCGTTGTTGGGTGGCTTCGGGGTCAATTTTGCCGCGC AGTCTTGGACTACGCGGAGGGGACGCCGGCTTCCCGCACAACACCTCTAC ATTACCGCACGGAAACATTTGTGGATTCCGAGCAAAAGATCTCTTACGCT TCCCGCTTTGTGGCATGCTGTTGCCCGTAGGTGGGCTGCTTGCACGGCTC TTACGCATCGGGACGAGACGTGCAGGACGTGCTCGAGAAAGTGCGCCCCG GGGCGGTGGTGTTGGAGCTGTGCGAGAGCCGACACAAGGCACTTCGGCGG GACCTGGAGAAGAGTGCAAAGGTAACCGTAGAGCAAAGGCGGGAACGGTA GGGTCTATTTGAGAAAAGGCCTACTGTAGATGGCGGCGTTGCTCGGCACG CGTGGCGGAAAGTGATGGTGTTGACGTGCTGCGATTGTTTTTTCGTTGCT GCGACTGTTGTTGCTCGCTCCCACGAGGCGGAGGAGCGAGGTGGGTCCCC GGAGAGAGGGAGGCTACGAAGGAGACGGTTTCGAGCATGCCGACACGTCG TTGGTTGTTTGTTGGATAGCCTGCGCGTGGAGGGTAGTGCGTGGTGTTGG CTCCAGCACCGTGGGTGTAGAGTAATACCCGTTTTCCGCCCTGTTTTGGG TATTGTACAATACCGGCAACCGAAGGGTATTTTTCGTGCTGTGTGTGTGT TTGTTTGTGTTTGTGCAACAACACCAGAGACAGCGCTGATGCCCGTTCGC GTGCTGTACGGAAAGAACCCTACTCTCTGGGCTTGTGCAACCAGCCGCCG TCCGCCGGCCTCCTTGCGCTGCCGCTCCTCAACAGATCTTCTTGCGCCGC CGTTCCTCCGGTGCTGCCAACAGCTTCGCCTCCATAGCGTTCTCGTCCCT CGCACTCAATTTCCATTGTTTGCCACCCCGTCCTCTTCGGTGTTATATTT GCTTTGCTGCACAAAATGCACCACGAAAATACCGACTGCCCACGCGACGA AATTCGGTTTCATGTATAAATTAGAGAGACCCTATCCCAAACCGTATCCC CCGACATTCCACCGATTCCGTCCTTCATCCAACATGCTTGCTAAACAAGA CCTGCGTAAGCCGCCTGGAAATATCCCTTTGGTTGTCCGGCATTCTACTT AAACTCGGCGCCGTGGCGGAATCCCCCTCCTCTCCGAACCGTTACACGCT GCCGCGGTAATAAACAGGGAGACGCGCCCCTTGAGGGCAAAGCGAAGTGG GTGTCGGCCTTCAGCTCCTGGGCCAAGGGGGTCAAGAAAACCTCCGCAAA GTCCGGCCTCCTGCAGGTGACCAACATGCGGCACAATAGCCGCTGCTTAT TTTCTCAGTGTTTGTTGTGTCATCAGAGCGGTCGATCCCTCTCCACCGGA CTGCAGCGCGCGGCCAGCCCGAGGGACGAATGCCTATCGCTGTCCCCCCT CTCCTTCTTCGAGACGCAATAATAAATACCCGACGTGCCTATTTTCTCAT GCCCTCTTTGCGTCAAAAAATAATCGTCGCATGCGGGGCATCGACCAGGG CATCCTGTCGGGCCTCTTGAGCGCGCCGTACGTCGTGCAGCGCCTCGGGG ACTTCGACCCGGGGCTAGAGTTCAAAACCGCCATGGTCTACGCCGACCCT TCCGTACGGCCGGGCTACTCGACAGGGGCGGCACGTGGGATGGTGACGTC AGCAGCGGGGGGGAGGGCGGGTCCCGGGGAGTGTTCGGTGGTGCTTGGCG ACAGGGATGTACAGGAGACGTTGAGACGGCTTGGTGGGGCGTTGACAGCG CTCACGGGTCGAGGGGAGGGGGGCGATGAGAAACACGGGGGGGGTAGGGG AGAGGGGGCGCCAGAGGGAGCTTTGCCTGGGGCGGGCGGTGGCGGGGTTG GTGTTGGGATGTTGGATGCTGCCGAGGTGAGCAAAGGGAAAGAGGCAAGT TTTGTTGTTTTAGTCTTGCCTAGAAGAGGGACGTGTCGTTGTACTTACAC GGCGATATTCGGTGTGTATTGCAGTAGAGGGTATCTTCGGATGCGGTCGA ACGGCTGCGGCGACACGGCTCCACAACCCTGTCTCGGGGCTTTTGCATCC ACGCGACCGCGGCTCTACGGATACACACGGACAAGAGATTGCCGCTCGCA AGTCCTTGGCGAACGTTCTAGTTTTTGCTAGTCGTGATGGTACCTCGGCG TTGCATGACGTACCCACCTCAGGTCGTGAGTTTTTGTCATGAGGTGCTCT CGCGCAAAGCTATTGATGGTTTCATGATACAGCGGAGGTCCATAAGTAGT GCCGGTTGAACACTTCCACTGCCCGGTATTTGTGTGGGTGGAATCGCTTC ACACGGATAGAATTGTATTTGTTCACGCTGTCTCAGTCTCTGAATAATGT CGCTTGCCCGTGTAGTGCCGATTGGTCTGGCGGGCACATACCGGCACTTT GAGGAACCCCGACTGCATGGGGTTTGCGCTGGGCTGGCGCGTGCTTTGTG ACACCGTTGGAGGTATTTCGCTCCAGTGATCTGAAGCTGGAAGCATCTTG ATGTACATATCATCATATGCCCCGAACGTTCTTGACTGCTTGATGGTCGG GCCGAAGATGCCGCACAACTGCCGTGCACCACGCCCGTATTACTGACGAG TGCCACGCTCTAAACACCCTCGAAATGCCGAGAGAAGAAGAGTGTGGTTT TGACGGGATGATGCTGATGATGCTGGGTTTTCATATCTACTTTGTTTTTT TTTGCGTTGTTGCAGACCGAGGCAACCTCGGGGTGGAATTGGGGCACGCT AGCCTCTGATGCGAGAATACTGCGAGTGGCCGTGGTTGGGCCTAGCGGCA GGCAGTGGCCAGACTCGCTCAACGTCTTGGACACCGTATGGAGGGAGCGA CAGGTGGGTTTAGTAGTACAGGCGTGCCCGCTATTTTCAGGGATATTTTT CCTTTTTTTTGCTTCCTTGGGCAATGGTTGACGCTCACAGTTATGTGAAC ATCCTTGCTTCGCTGTATGAGCCGAGCGTCTTGCTTTTTTTGGTGAAAAT GGACCGCCTGCCCATGTGTTGTCGGCGATCCTCCCCCCACACCCCTCCCA GATTCATTTCCCCAGCCTTCTACCCCCCCCACCCCTCCCCCCACCCCTAG GCGTTGGGGATGCTCTTGCTGCCGCTCTTGCTCCCCATTACGGTGGTTTC CGAGGCGTTGCAGAGGTCCATCGGGGGCGTCGCTACGGTAACGGCGGCGG CTTCAGGCAGCGGCGGTGGGGGTGTACGGGGGTTCGGGGCCTTCGGCGGG GTGAGCGGGGTGAATAGTGCCGGTTCGGCGGGGGGGGGGGGAGGAGGGGC AGCCGTCGACGTCGACCTGGGGCGTTTGCTGGAGGGAGCCAGCGACGTGT TGGACGCGCTGTTGGTGGCGCTGTCCGTCTGGTACATGCTGAGGTTTTTT CGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6287:687..4892-

>mRNA_Ecto-sp13_S_contig6287.17027.1 ID=mRNA_Ecto-sp13_S_contig6287.17027.1|Name=mRNA_Ecto-sp13_S_contig6287.17027.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1401bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6287:687..4892- (Ectocarpus species13 EcNAP12_S_4_19m)
GGTGCTGCGGTTGTCGCAGCCCCGAGACTGCTCGCTTTCCACGTCCCGCC
TGCTCCGAGTGGCCTTTGCGCTTCTGCGAGCACCAGCAACCGATGGCGGG
CTGTATCTCCCGCGGGCGGTGGCGGCAGGGCGGGGAAAGCAGGACTTGTC
GCCTTGGGGAAGGGCTTGGGTTGTAGTTTGCGAGCTAGGCCAGGCTGGTG
CACACGCTCCTTTTCGTCGCGGCTGGGTGTTTCGGCAGGAGACGGCGACG
CTTCTTCTCCGCCACCACCATCGCTGCAGAACATCCCGCACACCTCTCTA
GTGCTGAGGGACGAAGCCACAGGCTGCGACATTTACCTGGTGGGCTGCTT
GCACGGCTCTTACGCATCGGGACGAGACGTGCAGGACGTGCTCGAGAAAG
TGCGCCCCGGGGCGGTGGTGTTGGAGCTGTGCGAGAGCCGACACAAGGCA
CTTCGGCGGGACCTGGAGAAGAGTGCAAAGGGAGACGCGCCCCTTGAGGG
CAAAGCGAAGTGGGTGTCGGCCTTCAGCTCCTGGGCCAAGGGGGTCAAGA
AAACCTCCGCAAAGTCCGGCCTCCTGCAGGGCATCCTGTCGGGCCTCTTG
AGCGCGCCGTACGTCGTGCAGCGCCTCGGGGACTTCGACCCGGGGCTAGA
GTTCAAAACCGCCATGGTCTACGCCGACCCTTCCGTACGGCCGGGCTACT
CGACAGGGGCGGCACGTGGGATGGTGACGTCAGCAGCGGGGGGGAGGGCG
GGTCCCGGGGAGTGTTCGGTGGTGCTTGGCGACAGGGATGTACAGGAGAC
GTTGAGACGGCTTGGTGGGGCGTTGACAGCGCTCACGGGTCGAGGGGAGG
GGGGCGATGAGAAACACGGGGGGGGTAGGGGAGAGGGGGCGCCAGAGGGA
GCTTTGCCTGGGGCGGGCGGTGGCGGGGTTGGTGTTGGGATGTTGGATGC
TGCCGAGACCGAGGCAACCTCGGGGTGGAATTGGGGCACGCTAGCCTCTG
ATGCGAGAATACTGCGAGTGGCCGTGGTTGGGCCTAGCGGCAGGCAGTGG
CCAGACTCGCTCAACGTCTTGGACACCGTATGGAGGGAGCGACAGGCGTT
GGGGATGCTCTTGCTGCCGCTCTTGCTCCCCATTACGGTGGTTTCCGAGG
CGTTGCAGAGGTCCATCGGGGGCGTCGCTACGGTAACGGCGGCGGCTTCA
GGCAGCGGCGGTGGGGGTGTACGGGGGTTCGGGGCCTTCGGCGGGGTGAG
CGGGGTGAATAGTGCCGGTTCGGCGGGGGGGGGGGGAGGAGGGGCAGCCG
TCGACGTCGACCTGGGGCGTTTGCTGGAGGGAGCCAGCGACGTGTTGGAC
GCGCTGTTGGTGGCGCTGTCCGTCTGGTACATGCTGAGGTTTTTTCGGTG
A
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