mRNA_Ecto-sp13_S_contig62610.16990.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Match: D7FSU4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU4_ECTSI) HSP 1 Score: 148 bits (374), Expect = 7.880e-42 Identity = 80/94 (85.11%), Postives = 81/94 (86.17%), Query Frame = 1
Query: 1 TALMIASHRGYSLIVRMLLSKGAQVSIADVHGDTALHLSVLAGHMAVTKMLVEAGAPLEVATTSKHQLCTPLHLAADNGCIASIIPLLEAGANP 282
TALMIASHRGYSLIVRMLLSKGAQVSIADVHGD+ LHLSVLAGHMAVTK LVEAGAPLEVAT K LCTPLHLAADNGCI SI LEA P
Sbjct: 51 TALMIASHRGYSLIVRMLLSKGAQVSIADVHGDSGLHLSVLAGHMAVTKTLVEAGAPLEVAT--KQLLCTPLHLAADNGCIESITTSLEADVPP 142
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 4.030e-21 Identity = 52/71 (73.24%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 148 MLVEAGAPLEVATTSKHQLCTPLHLAADNGCIASIIPLLEAGANPNCRTEKGATPLFSVAWIGNVAAVRLL 360
MLVEAGAPLEVAT K QLCTPL +AA NGC AS+ LLEAGAN N R GATPLF AW GNV AVRLL
Sbjct: 1 MLVEAGAPLEVAT--KQQLCTPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLL 69
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 5.350e-19 Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 1 TALMIASHRGYSLIVRMLLSKGAQVSIADVHGDTALHLSVLAGHMAVTKMLVEAGAPLEVATTSKHQLCTPLHLAADNGCIASIIPLLEAGANPNCRTEKGATPLFSVAWIGNVAAVRLL 360
T LM A GY +VR+LL GA+VS+AD G TALHLS++ H+AV+K LV+AGA +E TPLH+AA G ++ L+ AGAN + E ATPL+ A G + VR+L
Sbjct: 41 TPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDG----TPLHVAAAKGFHKGMVMLIHAGANVDSEQEGRATPLYISARQGRLEDVRIL 156
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.270e-15 Identity = 57/129 (44.19%), Postives = 72/129 (55.81%), Query Frame = 1
Query: 13 IASHRGYSLIVRMLLSKGAQVSIADVHGDTALHLSVLAGHMAVTKMLVEAGAPLEVATTSKHQL----CTPLHLAADNGCIASIIPLLEAG--------ANPNCRTEKGAT-PLFSVAWIGNVAAVRLL 360
+AS GY +VR+LL GA+VS AD G TALHLS++ H+AV+K LV+AGA LE A HQ CTPLH+AA G ++ L+ AG ANP G + PL A G + VR L
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLE-ARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVREL 164
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 2.230e-14 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 1 TALMIASHRGYSLIVRMLLSKGAQVSIADVHGDTALHLSVLAGHMAVTKMLVEAGAPLEVATTSKHQLCTPLHLAADNGCIASIIPLLEAG 273
T LM AS GY +VR+LL GA+VS+AD G TALHLS++ H+AV+K LV+AGA +E TPLH+AA G ++ L+ AG
Sbjct: 41 TPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDG----TPLHVAAAKGFHKGMVMLIHAG 127
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 3.460e-13 Identity = 42/92 (45.65%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 1 TALMIASHRGYSLIVRMLLSKGAQVSIADVHGDTALHLSVLAGHMAVTKMLVEAGAPLEVATTSKHQLCTPLHLAADNGCIASIIPLLEAGA 276
T LM AS GY +VR+LL GA+VS+AD G TALHLS++ H+AV++ LV+AGA +E TPLH+AA G ++ L+ A
Sbjct: 41 TPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLAVSRALVKAGAGVEARGVDG----TPLHVAAAKGFHKGMVMLIHVDA 128
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Match: A0A6H5JMS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS6_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 1.050e-12 Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 1
Query: 148 MLVEAGAPLEVATTSKHQLCTPLHLAADNGCIASIIPLLEAGANPNCRTEKGATPLF 318
ML+EAGAPLEVAT K QLCTPLH+AA NGC AS +L+AGANPN R GA+ F
Sbjct: 1 MLMEAGAPLEVAT--KQQLCTPLHVAAVNGCAASTRTMLKAGANPNSRRFDGASRYF 55
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Match: A0A840BEN8_9RHOO (Uncharacterized protein n=1 Tax=Niveibacterium umoris TaxID=1193620 RepID=A0A840BEN8_9RHOO) HSP 1 Score: 68.9 bits (167), Expect = 7.880e-12 Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 1
Query: 1 TALMIASHRGYSLIVRMLLSKGAQVSIADVHGDTALHLSVLAGHMAVTKMLVEAGAPLEVATTSKHQLCTPLHLAADNGCIASIIPLLEAGANPNCRTEKGATPLFSVA 327
T L+ A+ G + IV LL +GA+ + HG+TA+ L+ + GH+ + + A APLEV +PLH A+ G A + LLEAGA + R + GAT L A
Sbjct: 59 TLLIQAAREGQTAIVTYLLERGARPEVRSRHGETAISLAAMNGHLETVEAFIAAHAPLEVRNA-----WSPLHYASYMGHEAIVRRLLEAGAVTDARADNGATALMLAA 162
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 9.780e-12 Identity = 46/121 (38.02%), Postives = 60/121 (49.59%), Query Frame = 1
Query: 1 TALMIASHRGYSLIVRMLLSKGAQVSIADVHGDTALHLSVLAGHM-AVTKMLVEAGAPLEVATTSKHQLCTPLHLAADNGCIASIIPLLEAGANPNCRTEKGATPLFSVAWIGNVAAVRLL 360
T LM+A H G+S I +ML+ KGA VSIAD G TALH A+ K+L +AGA L+ + PLH A + NP+C+ G+T L A G VA +R L
Sbjct: 141 TPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGS--APLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMREL 259
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Match: A0A6H5JWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ8_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 5.040e-11 Identity = 45/87 (51.72%), Postives = 53/87 (60.92%), Query Frame = 1
Query: 10 MIASHRGYSLIVRMLLSKGAQVSIADVHGDTALHLSVLAGHMAVTKMLVEAGAPLEVATTSKHQLCTPLHLAADNGCIASIIPLLEA 270
M+AS RG++LIVR+LL +GA V I G TAL G +AV KMLV AGA LE AT+S P HLAAD G A I L +A
Sbjct: 1 MVASQRGFTLIVRILLKEGANVLIVADLGFTALLACAQYGKLAVCKMLVNAGAELEAATSSNGS--RPRHLAADIGHAAVIKALRQA 85 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62610.16990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig62610.16990.1 >prot_Ecto-sp13_S_contig62610.16990.1 ID=prot_Ecto-sp13_S_contig62610.16990.1|Name=mRNA_Ecto-sp13_S_contig62610.16990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=117bp MIASHRGYSLIVRMLLSKGAQVSIADVHGDTALHLSVLAGHMAVTKMLVEback to top mRNA from alignment at Ecto-sp13_S_contig62610:420..779- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig62610.16990.1 ID=mRNA_Ecto-sp13_S_contig62610.16990.1|Name=mRNA_Ecto-sp13_S_contig62610.16990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=360bp|location=Sequence derived from alignment at Ecto-sp13_S_contig62610:420..779- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig62610:420..779- >mRNA_Ecto-sp13_S_contig62610.16990.1 ID=mRNA_Ecto-sp13_S_contig62610.16990.1|Name=mRNA_Ecto-sp13_S_contig62610.16990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=351bp|location=Sequence derived from alignment at Ecto-sp13_S_contig62610:420..779- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |