mRNA_Ecto-sp13_S_contig623.16956.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: D7FNL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL0_ECTSI) HSP 1 Score: 470 bits (1209), Expect = 3.900e-165 Identity = 232/237 (97.89%), Postives = 233/237 (98.31%), Query Frame = 2
Query: 101 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAGEEARMVQPRLRLR 811
MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYS EPFQ TERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQN+FNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAGEEA MVQPRLRLR
Sbjct: 1 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSSEPFQ-ETERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNEFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAGEEAHMVQPRLRLR 236
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A836CAI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI9_9STRA) HSP 1 Score: 224 bits (571), Expect = 1.260e-68 Identity = 123/225 (54.67%), Postives = 153/225 (68.00%), Query Frame = 2
Query: 101 MYSTKRVNKNIVEGNRFISVGDPYKELR-RLPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 772
MYSTKRVN I EG +ISVGDPY+ + LPGRWKGK F+ P NA+NGNF+KL+Y FQ ER++KTQP K+ GFGTKDAF+RGEFTATIRT+QYR+ LR+EQ +M + + E + +A+ K S+R F EG E HLYDVGR+ F+P D FY + +RMG +RTMAQDIG+ AW H+ +PEFGPI H K F+DRSHL V G
Sbjct: 1 MYSTKRVNDKIAEG--YISVGDPYRGTKDTLPGRWKGKGFKVLQVPVNAENGNFSKLEYKSCAFQ-EMERYSKTQPDRKK--GFGTKDAFRRGEFTATIRTEQYRDQLRKEQTIMAKFCDPVRDSEIIRRAEEKQRSTRTFCEGLPETDHLYDVGRTQVTKFDPKHSRDRFYTPDINRERRMGGFRTMAQDIGDGAWSHKYKSPEFGPIHHTKLFWDRSHLTVEG 220
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: D7G5S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S6_ECTSI) HSP 1 Score: 215 bits (548), Expect = 2.990e-65 Identity = 110/213 (51.64%), Postives = 143/213 (67.14%), Query Frame = 2
Query: 131 IVEGNRFISVGDPYKELRR-LPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEV 766
+V+G +IS+GD YK + LP RWKGK P NA+NGNF++L+Y EP+ A E+F+KTQPL KR LGFGTKDAF+ GEFTATIRT+QYR++LR E+ +M R+ ++ + + A R F +G +EI+HLYDVGRS +F+P D FY KR GPYRTMAQDIG+ AW H +PE GPI H+K FYD+SHL +
Sbjct: 1 MVDGGSYISIGDMYKGNKIILPDRWKGKGLSVPQLPKNAENGNFSRLEYRSEPY-ADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKNIMEKHRDPAKDQAAAQKYEKDCAEHRAFPDGLKEIEHLYDVGRSQVTEFDPKNSRDRFYTLSIGQEKRRGPYRTMAQDIGSGAWGHTYQSPEHGPIHHVKFFYDKSHLSL 212
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A6V1R9I1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9I1_HETAK) HSP 1 Score: 210 bits (535), Expect = 3.340e-63 Identity = 108/224 (48.21%), Postives = 146/224 (65.18%), Query Frame = 2
Query: 101 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 772
MY+TKR+NKN ++ + +IS+ DPY E R+LP RWK KQF P + G FAK Y+P+P++ + F K QP R LGFGTKDA KRGEFTATIRT+QYRE L++EQR+++ R+ E + +A+ K R F EG E + LYD+GR DF+P + D FY +K KR+G ++T A +G+ AWDH + PEFGPI ++KNFYD+ HL G
Sbjct: 1 MYATKRINKNKIDVS-YISIQDPYVENRKLPPRWKEKQFAVAHLPNPENGGYFAKKTYAPDPYKEAVH-FIKEQPADSRKLGFGTKDASKRGEFTATIRTEQYRETLKKEQRILDHQRDPAAETMTLERAR-KREEERSFPEGLSETRRLYDIGRQNVTDFDPRQSRDTFYTLRKDRPKRLGHHQTAAAAVGSGAWDHEYSKPEFGPIPYVKNFYDKGHLGTQG 221
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A7S2XZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZN8_9STRA) HSP 1 Score: 199 bits (507), Expect = 5.610e-59 Identity = 102/226 (45.13%), Postives = 148/226 (65.49%), Query Frame = 2
Query: 101 MYSTKRVNKNIVEGNR-FISVGDPYKELRR-LPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 772
MY T R +KN+++ + ++++GDPY + R +P RWK KQF + PA +G F + KY PE ++ E + K+QP +R GFG+ DA +RGEFT+TIRT+QYRE L+QE R+ R+ + ER+ +A A A+ R F EG E +HLYD+G+ +F+P D FY +K KR+G + T +Q +G+ AWDH+ T PEFGPI ++KNFYDRSHL++ G
Sbjct: 1 MYRTHRTHKNLLDKDASYVTIGDPYIDPNRTIPPRWKEKQFVVQHKPALKQSGYFEEFKYQPEEYK-EMESYLKSQPQDRRKNGFGSHDATRRGEFTSTIRTEQYRETLKQELRVHEKQRDPESERKVMAIA-AEREMGRTFTEGLTETRHLYDIGKKQVTEFDPRSSRDTFYVMRKDRPKRLGAHTTSSQAVGDGAWDHKYTKPEFGPIPYVKNFYDRSHLQIEG 224
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A7S2EF12_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EF12_TRICV) HSP 1 Score: 187 bits (475), Expect = 5.750e-54 Identity = 101/240 (42.08%), Postives = 147/240 (61.25%), Query Frame = 2
Query: 101 MYSTKRVNKNIVEGNR--FISVGDPYKE-LRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKE--EIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTG-----------KRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 772
MYSTK ++KNI + + S+GDPY+ + LP RWK KQF T CP NA NG F K +Y+P+P+ E+++KTQPL KR LGFG+ DAFK GEFT+ T++YR ++RQEQ+L+++ R+ ERE + + + + ++ + GK+ E K LYDVGR+ ++P D+FY K +R+G +R M+ IG AW H+ PEFG + +I+ FYDR H+E G
Sbjct: 1 MYSTKSIHKNINPNYQQTYTSIGDPYRNSVEELPSRWKKKQFVTPKCPKNAYNGLFVKPQYTPDPYTERAEQYSKTQPLEKRRLGFGSHDAFKPGEFTSDKATERYRNVVRQEQKLLDSVRDEMRERELIQKLRDRPRTTPKDKLGKDLKEPKFLYDVGRTHVTLYSPQSTRDSFYKLPKHAPVDPKLKGLDPIRRLGSHRPMSASIGEQAWRHKYAKPEFGQVKYIEKFYDRGHIECKG 240
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A7S2CP23_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP23_9STRA) HSP 1 Score: 166 bits (421), Expect = 5.990e-46 Identity = 102/243 (41.98%), Postives = 138/243 (56.79%), Query Frame = 2
Query: 101 MYSTKRV-NKNIVE------GNRFISVGDPYKE-LRRLPGRWKGKQFQTEGCPANADNGNFA----KLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQ-------KSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 772
MYSTK NKN VE +++IS+GDPY + + +LP RWK QFQ + P NA NG F Y+ +P++ T + QP KR +GFGTKDA KR EF ATIRT+QYRE L++E +++ R+ E+E K ++ S FV G E ++LYD+GR+ FNP D FY + K R+GPY T + IG AW+ + P+FG + KNF D+SHL VAG
Sbjct: 1 MYSTKIASNKNAVEMGDTKPHDKYISIGDPYVDRVGKLPERWKKPQFQIDRMPKNAGNGYFGYNNKDFTYASDPYK-ETRSYKAEQPPEKRTMGFGTKDASKRDEFAATIRTEQYRETLKRENTILDEQRDR--EKEAALMEKLRNTKSE-FVPGLTETEYLYDIGRTQSTPFNPKSAGDRFYQRRLNKDLDPKQGSMRLGPYMTSSSQIGTGAWETPYSKPQFGTVSPTKNFNDKSHLSVAG 239
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A482RVI8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVI8_9ARCH) HSP 1 Score: 155 bits (391), Expect = 1.420e-41 Identity = 93/233 (39.91%), Postives = 140/233 (60.09%), Query Frame = 2
Query: 101 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRW--KGKQ---FQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAK--HASSRRFVE----GKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPY-RTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLE 763
MYS+K V+K++V N +I+VGDPY + + P R KG++ FQ++G P NA+ G F K Y PE ++ + T TQPL +R LGFGTKDA KR EF++ RT+QYRE LR+E+ + + VK++ K+ +A A+ R+ G + I+ YD+GR+ DFNP D FY F + G+ G + ++ ++G AW+ + P FG G +KNF+D+SHL+
Sbjct: 1 MYSSKLVHKSMVANNAYITVGDPYHDPKANPFRQGKKGEKLTPFQSKGIPQNAELGYFTKKSYVPEGYKEGIKYIT-TQPLDQRKLGFGTKDAHKRDEFSSNNRTEQYRETLRKEKEMAESPEVVKEKLTKLLAERATMDFATQTRYTNTLSGGPKRIRQ-YDIGRTQVTDFNPKATRDKFYRFDEEHGRYFGDLAQPISCEVGAAAWETQYRPPAFGGKGEVKNFFDKSHLQ 231
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A8J2SVQ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVQ1_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.170e-38 Identity = 92/237 (38.82%), Postives = 130/237 (54.85%), Query Frame = 2
Query: 101 MYSTKRVNKNI-VEGNRFISVGDPY-KELRRLPGRWKGKQFQTEGCPANADNGNFAKL----KYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRN--------VKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRM--GPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLE 763
MY+ K + + E R+IS+GDPY E RLP RWK KQ T P NA NG F + Y P+ + + KTQP R LGFGT DA KR EFT +RT+QYR++L++E+R++ + ++ +K+A+A A +R V G LYD+GRS + F+P K D FY+ ++ + M G YR+M+QDIG+ AWD + FG FY +SH+E
Sbjct: 30 MYADKFTHPRLQCEAGRYISIGDPYVDEAERLPARWKEKQMGTTMYPKNAGNGYFGNMGKPFMYMPDKYVEQLP-YAKTQPYDTRKLGFGTHDASKRDEFTDRVRTEQYRDLLKREKRILQRNEQKRGGLAEQIRKAHKKLAEA-AVEEERQREVCGLSAAPFLYDIGRSRETQFDPKTKTDCFYNAYQARKREMRRGGYRSMSQDIGDGAWDLQQKRETFGRSHATAAFYSKSHIE 264
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: H3HED5_PHYRM (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3HED5_PHYRM) HSP 1 Score: 126 bits (316), Expect = 9.970e-31 Identity = 89/232 (38.36%), Postives = 125/232 (53.88%), Query Frame = 2
Query: 101 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPG---RWKGKQFQTEGCPA-NADNGN--FAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTG---KRMGPYRTMAQDIGNMAWDHRPTAPEFGPIG-HIKNFYDRSHLEV 766
MYSTK +NKNI + ++++GDPY++ + G R KGKQ T PA N NG+ F K YS +P Q +T + K+QP+ R GFG+KDA +R EF + IRT+QYRE L E ++++ + ++ + A S F EG +E KHLYD+GRS +FN D FY + + GP+ ++ IG A D P P G K FYD SHL +
Sbjct: 1 MYSTKVLNKNIAQS--YLTIGDPYRDPHLIEGKNSRHKGKQVLT--VPAKNTCNGSGYFDKKTYSSDPLQDNTA-YLKSQPMDSRKSGFGSKDASRRDEFMSHIRTEQYRETLHTEVKILDKQKQ--NDPPGLFDALDSLNQSHTFPEGLQETKHLYDIGRSQNTEFNQKSHRDTFYTMRVGNSQYKRNNGPFMLTSESIGLGADDVTGNRPN--PKGASTKQFYDHSHLHI 223 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig623.16956.1 >prot_Ecto-sp13_S_contig623.16956.1 ID=prot_Ecto-sp13_S_contig623.16956.1|Name=mRNA_Ecto-sp13_S_contig623.16956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNback to top mRNA from alignment at Ecto-sp13_S_contig623:4833..9487+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig623.16956.1 ID=mRNA_Ecto-sp13_S_contig623.16956.1|Name=mRNA_Ecto-sp13_S_contig623.16956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4655bp|location=Sequence derived from alignment at Ecto-sp13_S_contig623:4833..9487+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig623:4833..9487+ >mRNA_Ecto-sp13_S_contig623.16956.1 ID=mRNA_Ecto-sp13_S_contig623.16956.1|Name=mRNA_Ecto-sp13_S_contig623.16956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=714bp|location=Sequence derived from alignment at Ecto-sp13_S_contig623:4833..9487+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |