mRNA_Ecto-sp13_S_contig623.16956.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig623.16956.1
Unique NamemRNA_Ecto-sp13_S_contig623.16956.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: D7FNL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL0_ECTSI)

HSP 1 Score: 470 bits (1209), Expect = 3.900e-165
Identity = 232/237 (97.89%), Postives = 233/237 (98.31%), Query Frame = 2
Query:  101 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAGEEARMVQPRLRLR 811
            MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYS EPFQ  TERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQN+FNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAGEEA MVQPRLRLR
Sbjct:    1 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSSEPFQ-ETERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNEFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAGEEAHMVQPRLRLR 236          
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A836CAI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI9_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.260e-68
Identity = 123/225 (54.67%), Postives = 153/225 (68.00%), Query Frame = 2
Query:  101 MYSTKRVNKNIVEGNRFISVGDPYKELR-RLPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 772
            MYSTKRVN  I EG  +ISVGDPY+  +  LPGRWKGK F+    P NA+NGNF+KL+Y    FQ   ER++KTQP  K+  GFGTKDAF+RGEFTATIRT+QYR+ LR+EQ +M    +   + E + +A+ K  S+R F EG  E  HLYDVGR+    F+P    D FY    +  +RMG +RTMAQDIG+ AW H+  +PEFGPI H K F+DRSHL V G
Sbjct:    1 MYSTKRVNDKIAEG--YISVGDPYRGTKDTLPGRWKGKGFKVLQVPVNAENGNFSKLEYKSCAFQ-EMERYSKTQPDRKK--GFGTKDAFRRGEFTATIRTEQYRDQLRKEQTIMAKFCDPVRDSEIIRRAEEKQRSTRTFCEGLPETDHLYDVGRTQVTKFDPKHSRDRFYTPDINRERRMGGFRTMAQDIGDGAWSHKYKSPEFGPIHHTKLFWDRSHLTVEG 220          
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: D7G5S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S6_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 2.990e-65
Identity = 110/213 (51.64%), Postives = 143/213 (67.14%), Query Frame = 2
Query:  131 IVEGNRFISVGDPYKELRR-LPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEV 766
            +V+G  +IS+GD YK  +  LP RWKGK       P NA+NGNF++L+Y  EP+ A  E+F+KTQPL KR LGFGTKDAF+ GEFTATIRT+QYR++LR E+ +M   R+   ++    + +   A  R F +G +EI+HLYDVGRS   +F+P    D FY       KR GPYRTMAQDIG+ AW H   +PE GPI H+K FYD+SHL +
Sbjct:    1 MVDGGSYISIGDMYKGNKIILPDRWKGKGLSVPQLPKNAENGNFSRLEYRSEPY-ADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKNIMEKHRDPAKDQAAAQKYEKDCAEHRAFPDGLKEIEHLYDVGRSQVTEFDPKNSRDRFYTLSIGQEKRRGPYRTMAQDIGSGAWGHTYQSPEHGPIHHVKFFYDKSHLSL 212          
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A6V1R9I1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9I1_HETAK)

HSP 1 Score: 210 bits (535), Expect = 3.340e-63
Identity = 108/224 (48.21%), Postives = 146/224 (65.18%), Query Frame = 2
Query:  101 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 772
            MY+TKR+NKN ++ + +IS+ DPY E R+LP RWK KQF     P   + G FAK  Y+P+P++ +   F K QP   R LGFGTKDA KRGEFTATIRT+QYRE L++EQR+++  R+   E   + +A+ K    R F EG  E + LYD+GR    DF+P +  D FY  +K   KR+G ++T A  +G+ AWDH  + PEFGPI ++KNFYD+ HL   G
Sbjct:    1 MYATKRINKNKIDVS-YISIQDPYVENRKLPPRWKEKQFAVAHLPNPENGGYFAKKTYAPDPYKEAVH-FIKEQPADSRKLGFGTKDASKRGEFTATIRTEQYRETLKKEQRILDHQRDPAAETMTLERAR-KREEERSFPEGLSETRRLYDIGRQNVTDFDPRQSRDTFYTLRKDRPKRLGHHQTAAAAVGSGAWDHEYSKPEFGPIPYVKNFYDKGHLGTQG 221          
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A7S2XZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZN8_9STRA)

HSP 1 Score: 199 bits (507), Expect = 5.610e-59
Identity = 102/226 (45.13%), Postives = 148/226 (65.49%), Query Frame = 2
Query:  101 MYSTKRVNKNIVEGNR-FISVGDPYKELRR-LPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 772
            MY T R +KN+++ +  ++++GDPY +  R +P RWK KQF  +  PA   +G F + KY PE ++   E + K+QP  +R  GFG+ DA +RGEFT+TIRT+QYRE L+QE R+    R+ + ER+ +A A A+    R F EG  E +HLYD+G+    +F+P    D FY  +K   KR+G + T +Q +G+ AWDH+ T PEFGPI ++KNFYDRSHL++ G
Sbjct:    1 MYRTHRTHKNLLDKDASYVTIGDPYIDPNRTIPPRWKEKQFVVQHKPALKQSGYFEEFKYQPEEYK-EMESYLKSQPQDRRKNGFGSHDATRRGEFTSTIRTEQYRETLKQELRVHEKQRDPESERKVMAIA-AEREMGRTFTEGLTETRHLYDIGKKQVTEFDPRSSRDTFYVMRKDRPKRLGAHTTSSQAVGDGAWDHKYTKPEFGPIPYVKNFYDRSHLQIEG 224          
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A7S2EF12_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EF12_TRICV)

HSP 1 Score: 187 bits (475), Expect = 5.750e-54
Identity = 101/240 (42.08%), Postives = 147/240 (61.25%), Query Frame = 2
Query:  101 MYSTKRVNKNIVEGNR--FISVGDPYKE-LRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKE--EIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTG-----------KRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 772
            MYSTK ++KNI    +  + S+GDPY+  +  LP RWK KQF T  CP NA NG F K +Y+P+P+    E+++KTQPL KR LGFG+ DAFK GEFT+   T++YR ++RQEQ+L+++ R+   ERE + + + +  ++ +   GK+  E K LYDVGR+    ++P    D+FY   K              +R+G +R M+  IG  AW H+   PEFG + +I+ FYDR H+E  G
Sbjct:    1 MYSTKSIHKNINPNYQQTYTSIGDPYRNSVEELPSRWKKKQFVTPKCPKNAYNGLFVKPQYTPDPYTERAEQYSKTQPLEKRRLGFGSHDAFKPGEFTSDKATERYRNVVRQEQKLLDSVRDEMRERELIQKLRDRPRTTPKDKLGKDLKEPKFLYDVGRTHVTLYSPQSTRDSFYKLPKHAPVDPKLKGLDPIRRLGSHRPMSASIGEQAWRHKYAKPEFGQVKYIEKFYDRGHIECKG 240          
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A7S2CP23_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP23_9STRA)

HSP 1 Score: 166 bits (421), Expect = 5.990e-46
Identity = 102/243 (41.98%), Postives = 138/243 (56.79%), Query Frame = 2
Query:  101 MYSTKRV-NKNIVE------GNRFISVGDPYKE-LRRLPGRWKGKQFQTEGCPANADNGNFA----KLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQ-------KSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAG 772
            MYSTK   NKN VE       +++IS+GDPY + + +LP RWK  QFQ +  P NA NG F        Y+ +P++  T  +   QP  KR +GFGTKDA KR EF ATIRT+QYRE L++E  +++  R+   E+E     K ++  S  FV G  E ++LYD+GR+    FNP    D FY  +       K    R+GPY T +  IG  AW+   + P+FG +   KNF D+SHL VAG
Sbjct:    1 MYSTKIASNKNAVEMGDTKPHDKYISIGDPYVDRVGKLPERWKKPQFQIDRMPKNAGNGYFGYNNKDFTYASDPYK-ETRSYKAEQPPEKRTMGFGTKDASKRDEFAATIRTEQYRETLKRENTILDEQRDR--EKEAALMEKLRNTKSE-FVPGLTETEYLYDIGRTQSTPFNPKSAGDRFYQRRLNKDLDPKQGSMRLGPYMTSSSQIGTGAWETPYSKPQFGTVSPTKNFNDKSHLSVAG 239          
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A482RVI8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVI8_9ARCH)

HSP 1 Score: 155 bits (391), Expect = 1.420e-41
Identity = 93/233 (39.91%), Postives = 140/233 (60.09%), Query Frame = 2
Query:  101 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRW--KGKQ---FQTEGCPANADNGNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAK--HASSRRFVE----GKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPY-RTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLE 763
            MYS+K V+K++V  N +I+VGDPY + +  P R   KG++   FQ++G P NA+ G F K  Y PE ++   +  T TQPL +R LGFGTKDA KR EF++  RT+QYRE LR+E+ +  +   VK++  K+   +A    A+  R+      G + I+  YD+GR+   DFNP    D FY F +  G+  G   + ++ ++G  AW+ +   P FG  G +KNF+D+SHL+
Sbjct:    1 MYSSKLVHKSMVANNAYITVGDPYHDPKANPFRQGKKGEKLTPFQSKGIPQNAELGYFTKKSYVPEGYKEGIKYIT-TQPLDQRKLGFGTKDAHKRDEFSSNNRTEQYRETLRKEKEMAESPEVVKEKLTKLLAERATMDFATQTRYTNTLSGGPKRIRQ-YDIGRTQVTDFNPKATRDKFYRFDEEHGRYFGDLAQPISCEVGAAAWETQYRPPAFGGKGEVKNFFDKSHLQ 231          
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: A0A8J2SVQ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVQ1_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.170e-38
Identity = 92/237 (38.82%), Postives = 130/237 (54.85%), Query Frame = 2
Query:  101 MYSTKRVNKNI-VEGNRFISVGDPY-KELRRLPGRWKGKQFQTEGCPANADNGNFAKL----KYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRN--------VKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTGKRM--GPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLE 763
            MY+ K  +  +  E  R+IS+GDPY  E  RLP RWK KQ  T   P NA NG F  +     Y P+ +      + KTQP   R LGFGT DA KR EFT  +RT+QYR++L++E+R++  +          ++   +K+A+A A     +R V G      LYD+GRS +  F+P  K D FY+  ++  + M  G YR+M+QDIG+ AWD +     FG       FY +SH+E
Sbjct:   30 MYADKFTHPRLQCEAGRYISIGDPYVDEAERLPARWKEKQMGTTMYPKNAGNGYFGNMGKPFMYMPDKYVEQLP-YAKTQPYDTRKLGFGTHDASKRDEFTDRVRTEQYRDLLKREKRILQRNEQKRGGLAEQIRKAHKKLAEA-AVEEERQREVCGLSAAPFLYDIGRSRETQFDPKTKTDCFYNAYQARKREMRRGGYRSMSQDIGDGAWDLQQKRETFGRSHATAAFYSKSHIE 264          
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Match: H3HED5_PHYRM (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3HED5_PHYRM)

HSP 1 Score: 126 bits (316), Expect = 9.970e-31
Identity = 89/232 (38.36%), Postives = 125/232 (53.88%), Query Frame = 2
Query:  101 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPG---RWKGKQFQTEGCPA-NADNGN--FAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNDFNPYRKHDAFYDFQKSTG---KRMGPYRTMAQDIGNMAWDHRPTAPEFGPIG-HIKNFYDRSHLEV 766
            MYSTK +NKNI +   ++++GDPY++   + G   R KGKQ  T   PA N  NG+  F K  YS +P Q +T  + K+QP+  R  GFG+KDA +R EF + IRT+QYRE L  E ++++  +   ++   +  A      S  F EG +E KHLYD+GRS   +FN     D FY  +       +  GP+   ++ IG  A D     P   P G   K FYD SHL +
Sbjct:    1 MYSTKVLNKNIAQS--YLTIGDPYRDPHLIEGKNSRHKGKQVLT--VPAKNTCNGSGYFDKKTYSSDPLQDNTA-YLKSQPMDSRKSGFGSKDASRRDEFMSHIRTEQYRETLHTEVKILDKQKQ--NDPPGLFDALDSLNQSHTFPEGLQETKHLYDIGRSQNTEFNQKSHRDTFYTMRVGNSQYKRNNGPFMLTSESIGLGADDVTGNRPN--PKGASTKQFYDHSHLHI 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig623.16956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FNL0_ECTSI3.900e-16597.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CAI9_9STRA1.260e-6854.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5S6_ECTSI2.990e-6551.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1R9I1_HETAK3.340e-6348.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZN8_9STRA5.610e-5945.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2EF12_TRICV5.750e-5442.08Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2CP23_9STRA5.990e-4641.98Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A482RVI8_9ARCH1.420e-4139.91Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A8J2SVQ1_9STRA2.170e-3838.82Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
H3HED5_PHYRM9.970e-3138.36Uncharacterized protein n=19 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig623contigEcto-sp13_S_contig623:4833..9487 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score473.0
Seed ortholog evalue8.1e-131
Seed eggNOG ortholog2880.D7FNL0
Model size1123
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs290NK@1,2S4NB@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_005080.1
Cds size714
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig623.16956.1prot_Ecto-sp13_S_contig623.16956.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig623 4933..9178 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463867.135165-UTR-Ecto-sp13_S_contig623:4832..49321681463867.135165-UTR-Ecto-sp13_S_contig623:4832..4932Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig623 4833..4932 +
1681463867.3387523-UTR-Ecto-sp13_S_contig623:9178..94871681463867.3387523-UTR-Ecto-sp13_S_contig623:9178..9487Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig623 9179..9487 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463867.1472664-CDS-Ecto-sp13_S_contig623:4932..50631681463867.1472664-CDS-Ecto-sp13_S_contig623:4932..5063Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig623 4933..5063 +
1681463867.1588674-CDS-Ecto-sp13_S_contig623:6551..66181681463867.1588674-CDS-Ecto-sp13_S_contig623:6551..6618Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig623 6552..6618 +
1681463867.1751812-CDS-Ecto-sp13_S_contig623:6956..70691681463867.1751812-CDS-Ecto-sp13_S_contig623:6956..7069Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig623 6957..7069 +
1681463867.1841943-CDS-Ecto-sp13_S_contig623:7255..73071681463867.1841943-CDS-Ecto-sp13_S_contig623:7255..7307Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig623 7256..7307 +
1681463867.3077521-CDS-Ecto-sp13_S_contig623:8360..85221681463867.3077521-CDS-Ecto-sp13_S_contig623:8360..8522Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig623 8361..8522 +
1681463867.3247564-CDS-Ecto-sp13_S_contig623:8989..91781681463867.3247564-CDS-Ecto-sp13_S_contig623:8989..9178Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig623 8990..9178 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig623.16956.1

>prot_Ecto-sp13_S_contig623.16956.1 ID=prot_Ecto-sp13_S_contig623.16956.1|Name=mRNA_Ecto-sp13_S_contig623.16956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=238bp
MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADN
GNFAKLKYSPEPFQASTERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRT
QQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHL
YDVGRSLQNDFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRP
TAPEFGPIGHIKNFYDRSHLEVAGEEARMVQPRLRLR*
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mRNA from alignment at Ecto-sp13_S_contig623:4833..9487+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig623.16956.1 ID=mRNA_Ecto-sp13_S_contig623.16956.1|Name=mRNA_Ecto-sp13_S_contig623.16956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4655bp|location=Sequence derived from alignment at Ecto-sp13_S_contig623:4833..9487+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGGGCGATACTGCTCTATGACACGAGGAAGACAGCTGACAAGACAAACCA CATGAACCGTAGTGGCCCGGCCAGTTGGGGTTTCTTCAGTTCAACGAACC ATGTACAGCACCAAGCGCGTGAACAAGAACATCGTCGAAGGGAATAGGTT CATTTCCGTCGGAGACCCTTACAAGGAGCTAAGGAGGTTGCCCGGCCGCT GGAAGGGCAAACAGTTTCAGACCGAGGGTTGGTAAGTGGAGCAGCCGCGG GGGATGCGGCCACCATCCTCCCGTCCATGCATGAAAACAAATCGACTCGC AAGCTGTGGTCAATACAAGAAACGCCTTGTTGCTTGTTTTGCTGTACCAC TTCTGGCGGGGACAACAGAAGATCCCACTCCTACACCCCCCACGATGCAG GCGTATATCCCGCGGCTCTTCGATACCCCATGTATGGCACCGACAGCCAC ACCATAAACAAATGCCGTATAAAAATCCACCGAGCCTGGTCCGGTGAGAA CCCGGTGAACTCCGTCCCGGCCTTGAAGGAATGCGAGATCAATGGTCTAA CGACTACGCCATGCACGACTATGACTACACCCCCCCCTCCAATTTCAGGG TTCTCAGGGGACGAAGAGCGGGTGCAGGATTGGCTGAAAAAGTGTAAAAT GAGATAGAAGCTTGCTACTCCCTACAAACTCCTCACTTGTGTCTCAACAC GGAGTAGAAAAGGTGCTTCCATCTTCAAACCGGTCAAAACAATCTCGAAT TGGCTTTGGCAAACAACAATCGAGATCGACCGTCGCCGCCCCTTTTTCTC TCCAGAGCTCGCAACTATCCTCAAACAAACGAACAAAAACAACAAGATCG ACGTTGTGCACACACTTGAACCCCGCCCCTAAGAGTATACCGCTCCCCGA GTGATTCTCGATAGTAAACCGAAGGGGAATATTACGATGCTACCTGGTGT AAAATTTGGTACGCCGCCAATAGCTGTTGTCGCCATTTTCCATCATCGGT TAACTTCAGAAGAAAAAGGCATTCGCAGGGAAAATGCTGGGCACGGCCGA CTGCACAGCCGAGGTCACCCGCGTGTGGTACCAACTGCCAAGATTATTTA GAACCTGGGCGTGTCTGTCAATCCACTACCTTCCCCCCCAGACGTTGCGC CCTTTGTTGTTGTGCTTTTTAATGTCTAGACTATACCTGAAGAAAACCGT TGTTGACGTCTACCCGGCACGCTACGCCCAGCACTTGTGAAATTGCTGTT CTACTCTCTCCTTAGCGTTTCTGCAGCTGCTTATGTTCTACGTAACTCCC TTGGTTTCAACACAGTTTCCTCCTTTTCCCTTTTCCCCTTATTGGTTCAA AGAGCAACCAAAACGAGGGAGGGTTGTTCCACGGTTCTCGCGGTTATTAA AAGGCTTTACGACGCGCACCGGAGATCAACAGTACAACGTCCCGAGAAAA ACACCCGCGAACCTCGTCTCTTTCCCTTCCTCCATCGGAGGCTTCTGCTC CAATACTAACATCATTTTCAACGCGAAACTTGTCTGTGAAAGGAGACAAG TTCTCTTGTTGTCCGTAATGACGCAGTGCGGCACACAACAACCCGTGTGA AAGCACTTTTTTTCCCGACTACCAAGCCGCATCACGGCGAAGACTCCACG ATCGAACCTCGCAGGAAAACCGACCCCTTCCTTTCCCTTTCGCGCACTTG CCCTCTTCTTTTGTCAAAGCCCGGCGAACGCAGACAACGGGAACTTCGCC AAGCTCAAATATTCCCCAGAACCGTTCCAGGCAAGCGTGTGTGCCTGTGG GCAGACTTGAACGAGTGCAAAATATTGCAGGACATGTCTGTTTTGAAGCA CTTGCTTTCCGTAGGTTATATACGAGGATAGGAAGACACGAGGCCGGAGT CAGAGCCGTACAACTAGTGGATAAGACTACATTGGTGTTTGCAGGGCTGC ACCAAACGGTACCAACATTACGGCTCCTTCCGTGTTGATCGAAACGTTTC ATGTTGGTGCTTGAAAAACAACGGCCCAGGTTCTACAGTAGTCAGTGTTT CATGTGCGCGCATTCACTGACAGTTGTTGTACCACCCGTGCCCATACGCT TGCTATTCTTCGTGGTAACAGGAGACAGAGCGGTTCACCAAGACTCAGCC GCTGAGCAAGCGAAACCTGGGTTTTGGCACCAAGGATGCTTTCAAGAGGG GGGAATTTACGGCCACCATTCGAACGCAGCAGTACAGGTGTTTGAAAAGT ATCTGGCTGGGTGTCGTTGCCCCGCAATAATGGCTTTGGCGCGCTGTGCT TGAAGTCCGTCTTTGACTGAACGAAGAACTTGTTCCTCGTTGTTTGAAAC GCTCTACGCGCGCTCGACGGTTCCTCGGCCGCAATGCCGTCGCCATCGCA CGTTGCTGTTGACATATGGAAAGGGAAATGCTCCGCCAGGAGCAGCGGTT GATGAACGCATCACGGAACGTAAAGGTAAGAATCTACTATCACAACCTAT TTGGCTCGGGGACGTGTGGCCCGTGCATACTGTAGCAGGATATGTTGAAA GTCAGGGTGCGTGAGAGAGAAGCTGGCGGTCCTGCAGATTAATGCCACCG GTGGGTGTTCGAAAGGCTGCCCCGGAGGAGCAGGAATAACTCAGGGTCAC TCGCATCGCAGAACACCTGATGAGAAATTCATCGAACGATAGCTCCCCAT CGCCTAGACTGTACGTAGGTTTTGCACGGTGAGCGTGTTCGGGAAGGACA GATTTTCCCACTCGATTCCGCTGCAGGTTAAGGTTAGCCGAGGAGCAGAG GAGGGTTGGTTGCCCTTCAAACAAACAACGTGTACGGGCACCTCCAATGG GAGTAGACGCTCGCCCCATACACTGCCACGTACATAATCCACCTTCGTCC AGCGAGATGTGTTACATGGGTGACCTACTAGCTGCACTGACTATCAATCG ACTTACTAGTCAGCACCGCAACAGCCAATGTTTTGGAAGGAAAGCAGTCA TAAAAACAGCTGTATGAGAATACCCTTGCTCCGTTATGCGCAAAGGTCCC TGAAGTGGTGAATAACCGTTCATCAATGGAGTTTATTTCGTTCTTGTTGC AATGTGGCAAGGAATGGCCAAGCGTGGCTGATGTTAGGCAGCCTTGCTAG GGTGAAAGATGAGAGTGAGCTTCAGGGCTCGCTTCACCCTCCGGCTGGTC ACAGCAGACGGAGGGTCTTTTCGTTGTAAAAATCTTCAGACCTTGGGAAC GTCGTTCCTAGGGTCACGGATCTATACGGTCGCATGTACGTCCCTACTAC TGGGAAGATACCTATATCCTGGTTTCAATATGTAGAGAGTTTAAAGATAA AAAGTAGTTTTTCTGTGGAAATCTGTGCCTGATCAGGATAATCCACAGAC GCGCGTGTTCGTCTCGTTGTGCGCGGCCAAAATACTGAATGGGTTTGCCA TCGTTCAACCAGTTCGCGCGGTCGATACTTTTCAACAAATACACACATAC GCAACATCTTACACGGCACGCCTGACAGGACGAGCGAGAGAAGGTGGCGC AAGCCAAAGCCAAGCACGCCTCCTCAAGAAGATTCGTTGAAGGGAAGGAG GAGATCAAGCACCTGTATGACGTCGGCCGCTCCCTTCAAAATGATTTCAA CCCTTATCGAAAACACGATGCGTTTTACGACTTTCAGAAGGTGAGCGTGT ATCGCCAGCGGTTCTTATTGGACGGCTGTTCTAAGGCTCTTAAGATCCCT TGCAAAACATCGGCGTCGCTTCTTGGCATTCGCGTGTACTGTTGCATGCA GCAACAGTTACTGTAACTCGAACAACGCCAGCATTTGTTTTTGGCATCTG AGTCGACAAAATCGTGTTACTATCGAGTCTTCTTCGAACGCAAACATTTG CACACTTTTAGTGCTAATCTCTTTGTTTTCAAGTCTGTGTGTGTTCGCTT CGAAGGGATACAGGTAAAAAATGAGGAAGAGGTGGGTTGAGAAACACGAA AAGTACGAAACAGCAACAACAACAACAACAGCAGCAACGGAAACAACCAA ACCCGATCAACGGAGACTTGGACGACGCAAACAATTGTTTATTTCAGAGG TATTCTGTACCTCGCCGCTCTTTCTACATTCGCGACGAACAACACCCGAC CTAACAGTCCACAGGGAAGCGTATGGGTCCGTACCGCACCATGGCCCAGG ACATCGGGAATATGGCGTGGGACCATCGCCCGACGGCTCCAGAGTTTGGC CCGATAGGCCACATCAAGAACTTCTACGACCGCAGTCATCTCGAGGTGGC CGGGGAGGAGGCCCGTATGGTCCAGCCGCGGCTGCGTCTGCGTTGACTGG ACATTGAAAAATTTGGAAACATGCCAACAGGCCTGATAATTGAACGGTTT TGGGTGAAATGGGCAACGATGCCCTGGATTTTGAAAACTTTGGAAATGAA AGGCCAAGCGTGCTGCCGCTTTGCATCTGGAACCTCTACGACAATTTGCG TTGATGGAGTCCAGAACAGCGTTAAAAGCACGCTATTTAGGCACGTGTAC ACGATTGTTTCGTGGACATGAGCTTTTCTAGCTGCTCTTGGGCATTTGTA CTCTAGCGTTGCAGGGATTTGTTGTACGGGCCAGCTGTTACCCACTCTCA GTGAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig623:4833..9487+

>mRNA_Ecto-sp13_S_contig623.16956.1 ID=mRNA_Ecto-sp13_S_contig623.16956.1|Name=mRNA_Ecto-sp13_S_contig623.16956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=714bp|location=Sequence derived from alignment at Ecto-sp13_S_contig623:4833..9487+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTACAGCACCAAGCGCGTGAACAAGAACATCGTCGAAGGGAATAGGTT
CATTTCCGTCGGAGACCCTTACAAGGAGCTAAGGAGGTTGCCCGGCCGCT
GGAAGGGCAAACAGTTTCAGACCGAGGGTTGCCCGGCGAACGCAGACAAC
GGGAACTTCGCCAAGCTCAAATATTCCCCAGAACCGTTCCAGGCAAGCAC
AGAGCGGTTCACCAAGACTCAGCCGCTGAGCAAGCGAAACCTGGGTTTTG
GCACCAAGGATGCTTTCAAGAGGGGGGAATTTACGGCCACCATTCGAACG
CAGCAGTACAGGGAAATGCTCCGCCAGGAGCAGCGGTTGATGAACGCATC
ACGGAACGTAAAGGACGAGCGAGAGAAGGTGGCGCAAGCCAAAGCCAAGC
ACGCCTCCTCAAGAAGATTCGTTGAAGGGAAGGAGGAGATCAAGCACCTG
TATGACGTCGGCCGCTCCCTTCAAAATGATTTCAACCCTTATCGAAAACA
CGATGCGTTTTACGACTTTCAGAAGTCCACAGGGAAGCGTATGGGTCCGT
ACCGCACCATGGCCCAGGACATCGGGAATATGGCGTGGGACCATCGCCCG
ACGGCTCCAGAGTTTGGCCCGATAGGCCACATCAAGAACTTCTACGACCG
CAGTCATCTCGAGGTGGCCGGGGAGGAGGCCCGTATGGTCCAGCCGCGGC
TGCGTCTGCGTTGA
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