prot_Ecto-sp13_S_contig10142.169.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10142.169.1
Unique Nameprot_Ecto-sp13_S_contig10142.169.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length533
Homology
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Match: A0A6H5L225_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L225_9PHAE)

HSP 1 Score: 417 bits (1071), Expect = 4.350e-139
Identity = 299/319 (93.73%), Postives = 302/319 (94.67%), Query Frame = 0
Query:    2 DDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRESRGKAGNDRAASERLQEDANRQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQKGVDAILDLEPREXXXXXXXXXXXXDPFGNDVYDVQAQPLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------NDAGGKDNQAISNRDFGNGGGGGMAPDGRLYQH 313
            +DSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQ+RGVGPDSLLPNESLRAGVDEYLTRVTRESRGKAGN+RAASERLQEDANRQ XXXXXXXXXXXXXXXXXXXXXXXXXXXX     PQKGVDAILDLEPRE XXXXXXXXXXXDPFGNDVYDVQAQPLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       NDAG  DNQAISNRDFGNGGGGGM PDGRLYQH
Sbjct:   84 NDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQSRGVGPDSLLPNESLRAGVDEYLTRVTRESRGKAGNERAASERLQEDANRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRKRLPQKGVDAILDLEPREEXXXXXXXXXXXDPFGNDVYDVQAQPLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDAGSNDNQAISNRDFGNGGGGGMGPDGRLYQH 402          
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Match: D8LMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD5_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 3.240e-97
Identity = 246/321 (76.64%), Postives = 247/321 (76.95%), Query Frame = 0
Query:    2 DDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRESRGKAGNDRAASERLQEDANRQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQKGVDAILDLEPREXXXXXXXXXXXXDPFGNDVYDVQAQPLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NDAGGKDNQAISNRDFGNGGGGG-------MAPDGRLYQH 313
            +DSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE                                                       XXXXXXXXXXXXXXXXX QKGVDAILDLEPREXXXXXXXXXXXXDPFGNDVYDVQAQPLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NDAGG DNQA SN DFGN            M PDGRLYQH
Sbjct:   74 NDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNEEXXXXXXXXXXXXX-----------------------------------------XXXXXXXXXXXXXXXXXXQKGVDAILDLEPREXXXXXXXXXXXXDPFGNDVYDVQAQPLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDAGGYDNQANSNHDFGNXXXXXXXXXXXXMGPDGRLYQH 353          
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.110e-41
Identity = 84/166 (50.60%), Postives = 125/166 (75.30%), Query Frame = 0
Query:    3 DSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEF-GGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRESRGKAGNDRAASERLQE 167
            D +YDNTR KR++G+P++M+++++ +++GGGLV+A G+ V +++N +AF KLK+  GGG     LLD+LS +AP+HLKCP+C  I+ DAV++PCC  S CDSCVR AL A+ SM CPLC   GV PD L+PN SLRA  D+++ R+T+++R +A   R A+ +LQ+
Sbjct:  267 DPNYDNTRRKRILGVPSTMLQVAE-EQKGGGLVDAMGRRVVLKSNKEAFAKLKDLKGGGGGGAQLLDQLSAAAPEHLKCPLCRNIVQDAVLVPCCQGSACDSCVRDALAAN-SMQCPLCSRPGVTPDQLIPNRSLRAAADDFVARMTKDARARADLAREAALQLQQ 430          
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Match: A0A8K1C5H0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5H0_PYTOL)

HSP 1 Score: 116 bits (290), Expect = 1.990e-23
Identity = 65/154 (42.21%), Postives = 92/154 (59.74%), Query Frame = 0
Query:    3 DSSYDNTRLKRVVGIPTSMIK-LSDGDR----QGGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRE 150
            D  +D+ R+KR  GIP S +K +SD        G  +VNA  G L  I   ++ F KL    GG +    LD+L  + P HL CP+C ++M+DAV++PCC +S CD C+R AL    +++CPLC T  + P+ LLPN+ LRA V+E+L R   E
Sbjct:  267 DPEFDHHRVKRRTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIETQNKNFSKLMTKSGGSAT---LDQLISNPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSAL-IDHNLTCPLCNTPNMSPEKLLPNKVLRASVEEFLRRARTE 416          
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Match: K3X144_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X144_GLOUD)

HSP 1 Score: 114 bits (286), Expect = 3.090e-23
Identity = 62/154 (40.26%), Postives = 87/154 (56.49%), Query Frame = 0
Query:    3 DSSYDNTRLKRVVGIPTSMIKLSDGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRE 150
            D  YD  R+K+  GIP S +K  +   +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++M+DAV++PCC +S CD C+R AL     ++CPLC T  + P+ LLPN+ LR  VDE+L R   E
Sbjct:  269 DPEYDQHRVKKKTGIPKSFMKAVNDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMAKSGGSAT---LDQFIANPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSAL-IEKKLTCPLCNTTNMSPEKLLPNKVLRTSVDEFLRRARTE 418          
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Match: A0A3R7NI29_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NI29_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.230e-23
Identity = 64/154 (41.56%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    3 DSSYDNTRLKRVVGIPTSMIK-LSDGDR----QGGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRE 150
            D  YD  R+K+  GIP S +K +SD        G  +VNA  G L  I   ++ F KL    GG +    LD+   + P+HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR  VDE+L R   E
Sbjct:  275 DPEYDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVTNMSPEKLLPNKVLRTSVDEFLRRARTE 424          
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Match: A0A421G8I3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G8I3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.970e-23
Identity = 64/154 (41.56%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    3 DSSYDNTRLKRVVGIPTSMIK-LSDGDR----QGGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRE 150
            D  YD  R+K+  GIP S +K +SD        G  +VNA  G L  I   ++ F KL    GG +    LD+   + P+HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR  VDE+L R   E
Sbjct:  275 DPEYDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVTNMSPEKLLPNKVLRTSVDEFLRRARTE 424          
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Match: A0A2P4Y5F3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y5F3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.330e-23
Identity = 63/154 (40.91%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    3 DSSYDNTRLKRVVGIPTSMIK-LSDGDR----QGGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRE 150
            D  +D  R+K+  GIP S +K +SD        G  +VNA  G L  I   ++ F KL    GG +    LD+   + P+HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR  VDE+L R   E
Sbjct:  272 DPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTE 421          
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Match: A0A6A4FP78_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FP78_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.670e-23
Identity = 63/154 (40.91%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    3 DSSYDNTRLKRVVGIPTSMIK-LSDGDR----QGGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRE 150
            D  +D  R+K+  GIP S +K +SD        G  +VNA  G L  I   ++ F KL    GG +    LD+   + P+HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR  VDE+L R   E
Sbjct:  273 DPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMALSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTE 422          
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Match: D0NE99_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NE99_PHYIT)

HSP 1 Score: 113 bits (282), Expect = 1.170e-22
Identity = 63/154 (40.91%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    3 DSSYDNTRLKRVVGIPTSMIK-LSDGDR----QGGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRE 150
            D  +D  R+K+  GIP S +K +SD        G  +VNA  G L  I   ++ F KL    GG +    LD+   + P+HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR  VDE+L R   E
Sbjct:  265 DPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTE 414          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10142.169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L225_9PHAE4.350e-13993.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD5_ECTSI3.240e-9776.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CNQ4_9STRA1.110e-4150.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8K1C5H0_PYTOL1.990e-2342.21Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X144_GLOUD3.090e-2340.26Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7NI29_9STRA4.230e-2341.56Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A421G8I3_9STRA4.970e-2341.56Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A2P4Y5F3_9STRA5.330e-2340.91Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A4FP78_9STRA6.670e-2340.91Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
D0NE99_PHYIT1.170e-2240.91Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..182
NoneNo IPR availablePANTHERPTHR15439:SF0E3 UBIQUITIN-PROTEIN LIGASE RBBP6coord: 2..372
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 68..147
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 67..154
e-value: 3.9E-18
score: 66.9
IPR003613U box domainPFAMPF04564U-boxcoord: 74..145
e-value: 5.1E-5
score: 23.4
IPR033489E3 ubiquitin-protein ligase RBBP6 familyPANTHERPTHR15439RETINOBLASTOMA-BINDING PROTEIN 6coord: 2..372
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 80..121
score: 10.262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10142contigEcto-sp13_S_contig10142:694..5053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10142.169.1mRNA_Ecto-sp13_S_contig10142.169.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10142 694..5053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10142.169.1 ID=prot_Ecto-sp13_S_contig10142.169.1|Name=mRNA_Ecto-sp13_S_contig10142.169.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=533bp
TDDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQA
FRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKST
CDSCVRRALNASASMSCPLCQTRGVGPDSLLPNESLRAGVDEYLTRVTRE
SRGKAGNDRAASERLQEDANRQKKQEEASEAAGTSSASGAPGGGGGAGGS
NKRKRPPQKGVDAILDLEPREEEEAAEEEEEEEDPFGNDVYDVQAQPLEE
EEKKDGQEGEEETKKTGDEGGQQQQQQQRGNDAGGKDNQAISNRDFGNGG
GGGMAPDGRLYQHQHQRDGMGNRGPGGGGPLPQQQQQLRPHPDHLQQRPH
PFGEDQFHPQQQQQQRPQGFGGPPPPPGVPVDDRGFARGGGGPGPGMGMD
MGPGGNMGGFMNNNNSSNNGGHVGMRGGPPPRGMMGPPPLHGRPGGNNGP
PPIGNPDGGGGMMMNNGGGGGMMGPPPTGGRNANLRPNDGGGPGEGRGIH
GSGGGGRGGGGRDSNFGGGRGPGGGRGIPPPSN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR003613Ubox_domain
IPR033489RBBP6
IPR001841Znf_RING