prot_Ecto-sp13_S_contig11988.1694.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig11988.1694.1
Unique Name	prot_Ecto-sp13_S_contig11988.1694.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	484

Homology

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BLAST of mRNA_Ecto-sp13_S_contig11988.1694.1 vs. uniprot
Match: Q8QNJ9_ESV1K (EsV-1-74 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNJ9_ESV1K)

HSP 1 Score: 538 bits (1385), Expect = 7.490e-186
Identity = 322/369 (87.26%), Postives = 329/369 (89.16%), Query Frame = 0

Query:  115 DMFSTPSEISTDFDSASDANSTTTDKHSVKFDLQPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNNVGAADITREMEKLAMTNISLPHIPSPALSPGEYMYNVISDVLGTNNKNNLQRILARTPLPIAIKYLHHIAQKAFATGNRDIHKVVFDINKKYNIVSDLYLDVFAKGDSKSINNAMNYLEKTAQAFKTGAEFNTDELLKFFTPEFIAMNLIQSGNIGTYDKVMTEFKNEEIRISRGFHVAKPLLAAYFGVPSFFSNQKRYSFNRDIIVLAICGGSTETLDYVVKKTKIGKISHDIVLEARSCQPIPAHMMKHLVEKYRVPEMSV 483
            DMFSTPSEISTDFDS SDA+STTTDKHSV+FDLQPK XXXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXX            AGNN GA DIT EM+KLAMT+IS  HIPSPALSPGEYMYNVISDVLGTNNK NLQRILARTPLPIAIKYLHHIAQKAFATGNRDIHKVV DINKKYNIVSDLYLD FAKGDSKSINNAMNYLEKTAQAFKTGAEFNTDELLKFFTPEFIAMNLIQSGNIG YDKVMTEFKNEEIRISRGFHVAKPLLAAYFGVPSFFSNQKRYSFNRDIIVLAICGGSTETLDYVVKKTKIGKISHD+VLEARSCQPIPAHMMKHLVEK+ VPEMS+
Sbjct:  146 DMFSTPSEISTDFDSTSDASSTTTDKHSVRFDLQPKSXXXXXXXXXXXXXXXXXXXXXXXXXKGECSADTKAAKATKAXXXXXXXXXXXXNKKADVD-----AGNNAGADDITSEMKKLAMTSISPAHIPSPALSPGEYMYNVISDVLGTNNKKNLQRILARTPLPIAIKYLHHIAQKAFATGNRDIHKVVVDINKKYNIVSDLYLDAFAKGDSKSINNAMNYLEKTAQAFKTGAEFNTDELLKFFTPEFIAMNLIQSGNIGAYDKVMTEFKNEEIRISRGFHVAKPLLAAYFGVPSFFSNQKRYSFNRDIIVLAICGGSTETLDYVVKKTKIGKISHDVVLEARSCQPIPAHMMKHLVEKFNVPEMSI 509

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BLAST of mRNA_Ecto-sp13_S_contig11988.1694.1 vs. uniprot
Match: D8LPA6_ECTSI (EsV-1-74 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPA6_ECTSI)

HSP 1 Score: 533 bits (1374), Expect = 3.030e-184
Identity = 316/373 (84.72%), Postives = 324/373 (86.86%), Query Frame = 0

Query:  112 GEHDMFSTPSEISTDFDSASDANSTTTDKHSVKFDLQPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AGNNVGAADITREMEKLAMTNISLPHIPSPALSPGEYMYNVISDVLGTNNKNNLQRILARTPLPIAIKYLHHIAQKAFATGNRDIHKVVFDINKKYNIVSDLYLDVFAKGDSKSINNAMNYLEKTAQAFKTGAEFNTDELLKFFTPEFIAMNLIQSGNIGTYDKVMTEFKNEEIRISRGFHVAKPLLAAYFGVPSFFSNQKRYSFNRDIIVLAICGGSTETLDYVVKKTKIGKISHDIVLEARSCQPIPAHMMKHLVEKYRVPEMSV 483
            G+ +MFSTPSEISTDFDSASDA+STTTDKHSV+FD+Q K                          XXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXX   A NN GA DITREMEKLAMTNIS  HIPSPALSPGEYMYNVISDVLGTNNK NLQRILARTPLPIAIKYLHHIAQKAFATGNRDIHKVV DINKKYNIVSDLYLD FAKGDSKSI+NAMNYLEKTAQAF+TGAEFNTDELLKFFTPEFIAMNLIQSGNI  YDKVMTEFKNEEIRISRGFHVAKPLLAAYFGVPSFFSNQKRYSFNRDIIVLAICGGSTETLDYVVKKTKIGKISHDIVLEARSCQPIPAHMMKHLVEK+ VPEMSV
Sbjct:  133 GQDEMFSTPSEISTDFDSASDASSTTTDKHSVRFDMQSKSKSIPNDSPATCSTVKDQFRADTKATXXXXXXXXXXXXXXXXDTAKAEAXXXXXXXXXXXXXXXDVDARNNAGADDITREMEKLAMTNISPAHIPSPALSPGEYMYNVISDVLGTNNKKNLQRILARTPLPIAIKYLHHIAQKAFATGNRDIHKVVVDINKKYNIVSDLYLDAFAKGDSKSISNAMNYLEKTAQAFRTGAEFNTDELLKFFTPEFIAMNLIQSGNIAAYDKVMTEFKNEEIRISRGFHVAKPLLAAYFGVPSFFSNQKRYSFNRDIIVLAICGGSTETLDYVVKKTKIGKISHDIVLEARSCQPIPAHMMKHLVEKFSVPEMSV 505

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig11988.1694.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig11988.1694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Q8QNJ9_ESV1K	7.490e-186	87.26	EsV-1-74 n=1 Tax=Ectocarpus siliculosus virus 1 (i...	[more]
D8LPA6_ECTSI	3.030e-184	84.72	EsV-1-74 n=1 Tax=Ectocarpus siliculosus TaxID=2880...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 10..67
None	No IPR available	PANTHER	PTHR24346:SF40	SERINE/THREONINE-PROTEIN KINASE DDB_G0280133-RELATED	coord: 3..240
None	No IPR available	PANTHER	PTHR24346	MAP/MICROTUBULE AFFINITY-REGULATING KINASE	coord: 3..240
None	No IPR available	SUPERFAMILY	81995	beta-sandwich domain of Sec23/24	coord: 3..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig11988	contig	Ecto-sp13_S_contig11988:3538..5069 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig11988.1694.1	mRNA_Ecto-sp13_S_contig11988.1694.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig11988 3538..5069 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig11988.1694.1 ID=prot_Ecto-sp13_S_contig11988.1694.1|Name=mRNA_Ecto-sp13_S_contig11988.1694.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=484bp
MYQPQQQMQMRQMQQRQMQMQMHMRQQQQQQQQQQQMQQMQQEQHQRQQQ
QQQQQLFQARKKQVREKQQQNHTQAGNDDEEENNESDSDGDSDSDNDSVS
DSDDDGEDAGDGEHDMFSTPSEISTDFDSASDANSTTTDKHSVKFDLQPK
SKSKPKSNSTHKSKSKSKDSSSFKTKTEKTKTKHEAAAKTAKARAKKNRK
VDADADADADADADADAGNNVGAADITREMEKLAMTNISLPHIPSPALSP
GEYMYNVISDVLGTNNKNNLQRILARTPLPIAIKYLHHIAQKAFATGNRD
IHKVVFDINKKYNIVSDLYLDVFAKGDSKSINNAMNYLEKTAQAFKTGAE
FNTDELLKFFTPEFIAMNLIQSGNIGTYDKVMTEFKNEEIRISRGFHVAK
PLLAAYFGVPSFFSNQKRYSFNRDIIVLAICGGSTETLDYVVKKTKIGKI
SHDIVLEARSCQPIPAHMMKHLVEKYRVPEMSV*