mRNA_Ecto-sp13_S_contig62129.16934.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Match: A0A6H5KYR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR0_9PHAE) HSP 1 Score: 214 bits (546), Expect = 3.470e-63 Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 1
Query: 1 SFAVDGDTGRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQVC 306
SFAVDGDTGRLSFQLPELSVAASFRYRQ WSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQ C
Sbjct: 579 SFAVDGDTGRLSFQLPELSVAASFRYRQAWSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQGC 680
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Match: D8LQ64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ64_ECTSI) HSP 1 Score: 212 bits (540), Expect = 3.480e-63 Identity = 99/102 (97.06%), Postives = 99/102 (97.06%), Query Frame = 1
Query: 1 SFAVDGDTGRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQVC 306
SFAVDGD GRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFV SMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQ C
Sbjct: 409 SFAVDGDKGRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFVQSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQGC 510
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Match: A0A835Z7D9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D9_9STRA) HSP 1 Score: 121 bits (304), Expect = 6.380e-31 Identity = 56/102 (54.90%), Postives = 62/102 (60.78%), Query Frame = 1
Query: 10 VDGDTGRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKAT-GAPRAVVGRGSIHMEANYGESFPTGWVWAQVCGR 312
V ++G L F +PE SV A F R PWS RPN GPEGWL TGLLPLHYFVHS GS A Y +A G G +HME NYG+ FP WVW Q C R
Sbjct: 122 VQPESGTLEFSVPEASVKAKFHGRIPWSRSRPNKDGPEGWLAGTGLLPLHYFVHSFGSAAEYEFEAKHDKAEKCSGSGRLHMECNYGDMFPHAWVWGQGCSR 223
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Match: A0A7S0QBM1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBM1_9EUKA) HSP 1 Score: 107 bits (266), Expect = 1.130e-27 Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 10 VDGDTGRLSFQLPELSVAASFRY-RQPWSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQV 303
VDGD + ++ L +AA+ R PWS+ P+ AGPEGWL RT LLP HYF+HS S Y L+ ++ GRG+ H+E NYG +FPTGWVWAQ
Sbjct: 32 VDGDAAIIDVRVGPLRLAANLSSPRLPWSDAAPDRAGPEGWLGRTNLLPCHYFIHSFASPTSYHLER--GRSSLTGRGTSHLERNYGANFPTGWVWAQA 128
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Match: A0A812TWY2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812TWY2_9DINO) HSP 1 Score: 89.4 bits (220), Expect = 1.270e-18 Identity = 48/111 (43.24%), Postives = 59/111 (53.15%), Query Frame = 1
Query: 4 FAVDGDTGRLS---------FQLPE-LSVAASFRYRQPWSEERPNSAGPEGWLQR--TGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQ 300
F V+ + GRL+ F P L + AS R PW E ++ GPEGW R +GLLP HYFVHS+GS A YS+ + G G H EANYG FP+ W W Q
Sbjct: 109 FVVESEVGRLAVNDSKAELLFNFPSGLRIEASLANRIPWDEACRDTCGPEGWAGRLPSGLLPTHYFVHSLGSTAVYSVNG------LRGSGFAHQEANYGSFFPSAWTWVQ 213
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Match: A0A812QNU8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812QNU8_9DINO) HSP 1 Score: 84.3 bits (207), Expect = 6.550e-17 Identity = 44/102 (43.14%), Postives = 54/102 (52.94%), Query Frame = 1
Query: 4 FAVDGDTGRLSFQLPE-LSVAASFRYRQPWSEERPNSAGPEGWLQR--TGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQ 300
FAV+ L P L V AS R PW ++ GPEGW R +GLLP HYFVHS+GS A Y++ + G G H EANYG FP+ W W +
Sbjct: 117 FAVNDSKSELLLTFPSGLKVEASLDNRVPWDAACKDTCGPEGWAGRLPSGLLPTHYFVHSLGSTATYAVNE------LRGFGFAHQEANYGSFFPSAWTWVE 212
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Match: A0A0E9NAG3_SAICN (Uncharacterized protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NAG3_SAICN) HSP 1 Score: 78.2 bits (191), Expect = 8.640e-15 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 46 PELSVAASFRYRQPWSEERPNSAGPEGWLQRTG-LLPLHYFVHSMGSEAGYSLKATGAPRAVVG-RGSIHMEANYGESFPTGWVWAQV 303
P L++ R PWS + P S GPEG + +T LLPLH+FV+S S+A Y++K G +A+ G G H E N+GESFP+GW+WAQ
Sbjct: 134 PSLTLDLEVTNRTPWSSDDPLS-GPEGPIVQTDRLLPLHWFVYSTKSKATYTIKH-GDEQALSGDNGVAHQEKNWGESFPSGWIWAQA 219
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Match: A0A7M7GGY2_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7GGY2_STRPU) HSP 1 Score: 76.3 bits (186), Expect = 4.000e-14 Identity = 33/93 (35.48%), Postives = 50/93 (53.76%), Query Frame = 1
Query: 34 SFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQVCGR 312
SF + ++ A +F W GPEGWL +LP+H+FV+S+G+ Y+ +G R + G+ H E N+G+ FP GW+W Q R
Sbjct: 143 SFTIDGVTFAGNFTRPLLWDS---TGQGPEGWLTDLPMLPIHWFVYSLGTPGSYTWNQSG--RVISGKAHAHQEKNWGQGFPAGWMWTQAYNR 230
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Match: UPI001BB0F729 (uncharacterized protein LOC121409600 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB0F729) HSP 1 Score: 75.1 bits (183), Expect = 1.110e-13 Identity = 36/103 (34.95%), Postives = 52/103 (50.49%), Query Frame = 1
Query: 4 FAVDGDTGRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQVCGR 312
F V D+ +F + ++ A SF W GPEGWL LLP+H+FV+S+G+ Y+ T + + G H E N+G+ FP GW+W Q R
Sbjct: 149 FNVTPDSTVFNFTIEGVTFAGSFSGPLLWDS---TGQGPEGWLSNLPLLPIHWFVYSLGTPGRYTW--THSDSVISGMAHAHQEKNWGQGFPAGWMWTQAYNR 246
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Match: A0A0D1C3F2_USTMA (Uncharacterized protein n=1 Tax=Ustilago maydis (strain 521 / FGSC 9021) TaxID=237631 RepID=A0A0D1C3F2_USTMA) HSP 1 Score: 71.6 bits (174), Expect = 2.230e-12 Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 109 SAGPEGWLQRTG-LLPLHYFVHSMGSEAGYSLKATGAPRA--------VVGRGSIHMEANYGESFPTGWVWAQV 303
S GPEGW+Q G LPLH++VHS + A +SL+ A GRG +H+E N+G+SFP+GW+WA
Sbjct: 340 SRGPEGWIQHLGAFLPLHWYVHSSSAPAMFSLEHLAPDSARLELDNAIAAGRGLLHVEKNWGQSFPSGWMWAHA 413 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62129.16934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig62129.16934.1 >prot_Ecto-sp13_S_contig62129.16934.1 ID=prot_Ecto-sp13_S_contig62129.16934.1|Name=mRNA_Ecto-sp13_S_contig62129.16934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp SFAVDGDTGRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLback to top mRNA from alignment at Ecto-sp13_S_contig62129:70..741- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig62129.16934.1 ID=mRNA_Ecto-sp13_S_contig62129.16934.1|Name=mRNA_Ecto-sp13_S_contig62129.16934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig62129:70..741- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig62129:70..741- >mRNA_Ecto-sp13_S_contig62129.16934.1 ID=mRNA_Ecto-sp13_S_contig62129.16934.1|Name=mRNA_Ecto-sp13_S_contig62129.16934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=312bp|location=Sequence derived from alignment at Ecto-sp13_S_contig62129:70..741- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |