prot_Ecto-sp13_S_contig6212.16933.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6212.16933.1
Unique Nameprot_Ecto-sp13_S_contig6212.16933.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length271
Homology
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Match: D7G250_ECTSI (AAA_23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G250_ECTSI)

HSP 1 Score: 491 bits (1265), Expect = 3.320e-172
Identity = 266/271 (98.15%), Postives = 269/271 (99.26%), Query Frame = 0
Query:    1 VGVVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSNLRKEIEAIDARTAELSESLEKLRAVADEVRMLEGRKQSLLLACRDLDVRMAEKRENIGDGEMSSESDETLSKNLQEFDAKLAAVADEIQFYADEADRCRERAEAAKKEKDRLQGEQGSVQAQLAQQ 271
            VGVVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYS LR+EIEAIDARTAELSESLEKLRAVADEVRMLEGRKQSLLLACRDLDVRMAEKRENIGDGEMSSESDETLSKNLQEFDA+LAAVADEIQFYADEADRCRERAEAAKK+KDRLQGEQGSVQAQL QQ
Sbjct:   92 VGVVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSTLRQEIEAIDARTAELSESLEKLRAVADEVRMLEGRKQSLLLACRDLDVRMAEKRENIGDGEMSSESDETLSKNLQEFDARLAAVADEIQFYADEADRCRERAEAAKKKKDRLQGEQGSVQAQLTQQ 362          
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Match: A0A6H5L8V1_9PHAE (AAA_23 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8V1_9PHAE)

HSP 1 Score: 345 bits (884), Expect = 1.340e-111
Identity = 193/223 (86.55%), Postives = 196/223 (87.89%), Query Frame = 0
Query:   49 IPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSNLRKEIEAIDARTAELSESLEKLRAVADEVRMLEGRKQSLLLACRDLDVRMAEKRENIGDGEMSSESDETLSKNLQEFDAKLAAVADEIQFYADEADRCRERAEAAKKEKDRLQGEQGSVQAQLAQQ 271
            IPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKAL+NIKKTKQEYAS VKELKVDLAALQERLRAANDLKEEMDASTETYSNLR                    RAVADEVRMLE RKQSLLLACRDLDVRM EKR+NIGDGEMSSESDETL KNLQEFD KLA VADEIQFYADEADRCRERAEAAKK+KDRLQGEQGSVQAQL QQ
Sbjct:   90 IPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALENIKKTKQEYASAVKELKVDLAALQERLRAANDLKEEMDASTETYSNLRXXXXXXXXXXXXXXXXXXXXRAVADEVRMLEERKQSLLLACRDLDVRMTEKRDNIGDGEMSSESDETLRKNLQEFDDKLAVVADEIQFYADEADRCRERAEAAKKKKDRLQGEQGSVQAQLTQQ 312          
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Match: A0A8J2S5K6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S5K6_9STRA)

HSP 1 Score: 176 bits (445), Expect = 3.090e-46
Identity = 112/268 (41.79%), Postives = 158/268 (58.96%), Query Frame = 0
Query:    3 VVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSNLRKEIEAIDARTAELSESLEKLRAVADEVRMLEGRKQSLLLACR----DLDVRMAEKRENIGDGEMSSESDETLSKNLQEFDAKLAAVADEIQFYADEADRCRERAEAAKKEKDRLQGEQGSVQA 266
            VV+RS QLTQK+ T  FK LDGVIR     G   S  HKC E+DK +P+ +GVS+A+LE+V+FCHQED+SWPLQEGAV+KK+FDDIF+SARYTKALD + K K+  AS  K++  DL  L     AA D  +   ++ +   +    I+A D +   L +  EK R + D++R L+ ++Q L   CR     L+  +    E + D  +  E D+ L+        +  +  D I+    E  + RE AE A+KE  R+ GE+GS +A
Sbjct:   94 VVVRSMQLTQKKTTATFKQLDGVIRATKPDGSKTSYTHKCGELDKTVPIMIGVSRAVLESVIFCHQEDSSWPLQEGAVLKKRFDDIFDSARYTKALDVLNKQKKGLASKAKDISGDLKGLHADKVAAQDHLKRKASAEKAIQSADASIKACDDKQGSLRD--EKSR-INDKLRKLQAQEQGLQ-ECRAEVDGLERSLKYLEERLADSALMDEDDDVLAATAARLQEEEDSQFDIIRKLEREEGKHRELAEQARKEASRVDGEKGSAEA 357          
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Match: A0A1V9ZB00_9STRA (DNA repair protein RAD50 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB00_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.040e-45
Identity = 106/248 (42.74%), Postives = 155/248 (62.50%), Query Frame = 0
Query:    3 VVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMD-------ASTETYSNLRKEIEAIDARTAELSESLEKLRAVADEVRMLE----GRKQSLLLACRDLDVRMAEKRENIGDGEMSSESDETLS-KNLQEFDAKLAAVADEIQFYAD 238
            VV R+F+L Q + + +F+A+DGV+R  N+ G+ VSIN KC+E+DKHIP  LGVSKA+LE+V+FCHQE+++WPLQEGAV+KK+FDDIFESARYTKAL+ IKK K+E  +  K++K DL  L E+++   D++E+++       A    Y  +  EI  + AR  E    L  +R VA  VR LE     +   +  A R L   M E   ++ +   + +S  T+  K + E +A+ AA+   +Q   D
Sbjct:   94 VVQRTFRLQQMKASCKFQAMDGVVRMINDHGEKVSINQKCSELDKHIPDLLGVSKAVLESVIFCHQEESNWPLQEGAVLKKRFDDIFESARYTKALEAIKKLKKERLAMAKDMKRDLDVLGEQVKRVRDMEEQLETREAKLLALKADYETMSGEIGQLAARVTETDAELAHVRDVAAHVRELERTAAAKSDEMARAFRSLGPEMTESTASLEEILANYDSILTIKHKEVLEIEAQEAALTAAVQAADD 341          
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Match: A0A662WHK9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHK9_9STRA)

HSP 1 Score: 172 bits (437), Expect = 3.560e-45
Identity = 101/227 (44.49%), Postives = 150/227 (66.08%), Query Frame = 0
Query:    3 VVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSNLRKEIEAIDARTAELSESLEKLRAVADEVRMLEGRKQSLLLACRDLDVRMAEKRENIGDG-----EMSSESDETLSKNLQEFDA 224
            VV R++Q+ Q + ++QFKALDGVIR  NE G+ VS+ HKC E+D+HIP  +GVSKAIL++V+FCHQE+A+WPLQEGAV+KK+FDDIFESARYTKAL+ I+K K+      K+ K DLA L   ++ A +++++++A+ +T   + +E E      A+  E+LE++  +  E+   EG   +L    +  DV  A+K   I +      +M S++DE L   L  +DA
Sbjct:   94 VVQRTYQVRQLKASVQFKALDGVIRVVNELGEKVSMGHKCGELDRHIPDMMGVSKAILDSVIFCHQEEANWPLQEGAVLKKRFDDIFESARYTKALEAIRKLKKARNDDTKDYKRDLAVLTVNMKTAENIRDKIEAAEDTLRAVSEEREKAGDAVAQAQETLEEMERLQSEI---EGHHNAL--ERQQCDV--AQKEATIKNAYAKIEQMMSDTDEELEALLNNYDA 313          
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Match: A0A1E7F3C8_9STRA (AAA_23 domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3C8_9STRA)

HSP 1 Score: 160 bits (404), Expect = 4.160e-45
Identity = 75/114 (65.79%), Postives = 94/114 (82.46%), Query Frame = 0
Query:    3 VVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELK 116
            V++RS ++TQK+ T+ FK LDG +RT N +G+ ++++HKCTE+D+ IPL LGVSKAILENVVFCHQEDASWPLQEGAV+KKKFDDIF+S RYTKALD   K K+EY    K+ K
Sbjct:   93 VIVRSMEVTQKKTTMTFKQLDGNLRTVNNTGERIAMSHKCTELDRQIPLMLGVSKAILENVVFCHQEDASWPLQEGAVLKKKFDDIFDSTRYTKALDVFSKAKKEYVLKAKDHK 206          
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Match: A0A8K1CBI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBI4_PYTOL)

HSP 1 Score: 171 bits (434), Expect = 9.010e-45
Identity = 84/172 (48.84%), Postives = 124/172 (72.09%), Query Frame = 0
Query:    3 VVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSNLRKEIEAIDARTAELSESLEKLRAVADEV 174
            VV R+FQL Q +   Q+KALDGV+R  NE G+ VS++HKC E+D+HIP  LGVSKAILE+V+FCHQED++WPLQEGAV+KK+FDDIFESARYTKAL+ I+K ++      KE K +L  L  +L+ A +++E+++ + E  S ++ +   +D        +L +++ ++DE+
Sbjct:   94 VVQRTFQLVQTKSKTQYKALDGVVRVVNELGEKVSMSHKCAELDRHIPEMLGVSKAILESVIFCHQEDSNWPLQEGAVLKKRFDDIFESARYTKALEAIRKLRKARNDDAKEFKRELDVLNVKLKMAEEIREKIEVAEEKLSRMKDKAAQLDDSVDNAENTLREMKQLSDEI 265          
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Match: A0A2P4XQ47_9STRA (DNA repair protein RAD50 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQ47_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.160e-44
Identity = 80/139 (57.55%), Postives = 109/139 (78.42%), Query Frame = 0
Query:    3 VVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTE 141
            VV R++Q+ Q +K LQFKALDGVIR  NE G+ VS+NHKC E+D+HIP  LGVSKAILE+V+FCHQED++WPL+EGA +KK+FD+IFESARYTKAL+ I+K K+      K+ K DL  L   ++AA D++++++ + E
Sbjct:   94 VVNRTYQVRQTKKALQFKALDGVIRVVNELGEKVSLNHKCGELDQHIPDMLGVSKAILESVIFCHQEDSNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARLDNAKDYKRDLDVLTVNMKAAGDIRDKIELAQE 232          
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Match: A0A7S4KCM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCM0_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.200e-44
Identity = 93/227 (40.97%), Postives = 140/227 (61.67%), Query Frame = 0
Query:    3 VVIRSFQLTQKRKTLQFKALDGVIRTKN-ESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSNLRKEIEAIDARTAELSESLEKLRAVADEVRMLEGRKQSLLLACRDLDVRMAEKRENIGDGEMSSESDETLSKNLQEFDAKLAA 228
            VV+RS +LTQK+ T+QFKALDG++RT +  +G+ V+++HKC E+D+ IP  +GVSK ILE+VVF HQED+SWPLQ+ A +K+KFDDIF+S RY KAL+ I+K++ EYA+  KE K +L+ L     AA   ++E D + +  + + +++ A D      SE   K   V +E++ L  R   L       +   A KR  + +     ++ E L   L  FD  ++A
Sbjct:   95 VVVRSMELTQKKTTMQFKALDGILRTNDPNTGERVALSHKCGELDRQIPTLMGVSKPILEHVVFTHQEDSSWPLQDAASLKRKFDDIFDSTRYAKALEAIRKSRLEYANVAKEHKSELSGLASHKHAAEGFRQETDMARDELAEIDEKMAACDESIERESEKRSKYERVLNEMQELSDRAGDLRNETERDETIAASKRSMLEEDWTDEQTSERLEAMLSGFDDVISA 321          
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Match: M4BIK8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIK8_HYAAE)

HSP 1 Score: 169 bits (428), Expect = 5.580e-44
Identity = 102/225 (45.33%), Postives = 145/225 (64.44%), Query Frame = 0
Query:    3 VVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPLRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSNLRKEIEAIDARTAELSESLEKLRAVADEVR----MLEGRKQSLLLACRDLDVRMAEKRENIGDGEMSSESDETLSKNLQEFD 223
            VV R+FQ+ Q +K+LQFKALDGVIR  NE G+ VS++HKC E+D+HIP  LGVSKAI+ENV+FCHQEDA+WPL+EGA +KK+FD IFESARYTKAL+ I+K K+      K+ K DL  L   ++ A  ++  +DA  E     R+E  A     A   + LE+L+ +  EV+     L+ R++ ++L  + +  R   K ENI      S++D+ L   L +++
Sbjct:    2 VVQRTFQVRQTQKSLQFKALDGVIRVVNEVGEKVSLSHKCGELDQHIPDMLGVSKAIIENVIFCHQEDANWPLREGAELKKRFDQIFESARYTKALEAIRKLKKARLDQTKDYKRDLDVLTVNMKTAETIRVSLDARQEQLQQARREEGAGREEIASAGKMLEELQVLQTEVKRVHEQLKRREEDVVLKEQSV-WRAYSKIENI-----MSDTDDELQGVLNDYE 220          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6212.16933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G250_ECTSI3.320e-17298.15AAA_23 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L8V1_9PHAE1.340e-11186.55AAA_23 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A8J2S5K6_9STRA3.090e-4641.79Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1V9ZB00_9STRA1.040e-4542.74DNA repair protein RAD50 n=1 Tax=Achlya hypogyna T... [more]
A0A662WHK9_9STRA3.560e-4544.49Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A1E7F3C8_9STRA4.160e-4565.79AAA_23 domain-containing protein (Fragment) n=1 Ta... [more]
A0A8K1CBI4_PYTOL9.010e-4548.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4XQ47_9STRA1.160e-4457.55DNA repair protein RAD50 (Fragment) n=1 Tax=Phytop... [more]
A0A7S4KCM0_9STRA3.200e-4440.97Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
M4BIK8_HYAAE5.580e-4445.33Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..163
NoneNo IPR availableCOILSCoilCoilcoord: 233..267
NoneNo IPR availableGENE3D3.40.50.300coord: 2..209
e-value: 5.3E-12
score: 48.0
NoneNo IPR availablePANTHERPTHR18867RAD50coord: 3..268
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 31..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6212contigEcto-sp13_S_contig6212:5155..8370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6212.16933.1mRNA_Ecto-sp13_S_contig6212.16933.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6212 5155..8370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6212.16933.1 ID=prot_Ecto-sp13_S_contig6212.16933.1|Name=mRNA_Ecto-sp13_S_contig6212.16933.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=271bp
VGVVIRSFQLTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIP
LRLGVSKAILENVVFCHQEDASWPLQEGAVVKKKFDDIFESARYTKALDN
IKKTKQEYASTVKELKVDLAALQERLRAANDLKEEMDASTETYSNLRKEI
EAIDARTAELSESLEKLRAVADEVRMLEGRKQSLLLACRDLDVRMAEKRE
NIGDGEMSSESDETLSKNLQEFDAKLAAVADEIQFYADEADRCRERAEAA
KKEKDRLQGEQGSVQAQLAQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase