prot_Ecto-sp13_S_contig11988.1692.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11988.1692.1
Unique Nameprot_Ecto-sp13_S_contig11988.1692.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length321
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11988.1692.1 vs. uniprot
Match: Q8QNK2_ESV1K (EsV-1-71 n=2 Tax=root TaxID=1 RepID=Q8QNK2_ESV1K)

HSP 1 Score: 575 bits (1483), Expect = 1.990e-206
Identity = 297/320 (92.81%), Postives = 311/320 (97.19%), Query Frame = 0 
Query:    1 MTSAFATDLTQYPISISGDQIVQNIIQVAQSDGINAVSLDHDFYGISQDGRVFSMASFRVVESGPNTNTGTLELHVYNSDGVSVPILTIGEDGTTIEGSLNVKGGHTSFETTSVVVEDKDMVLASGATSVEHLDKGGIILGTGESGTKDMLYDLDGDMWKSNIGINFDTGAAFTIGDAQTILNGTGFTIGEVSLTDGSLQLAPDISLGTAGLEIGNISVTPLGGLVIGSPDGSDVDSTVVLDKSGLTICEKINLGVDSGLSIGSNVLLDEQGLYLKNTEASLYLGQTGWKIAYDSSSQHLLFEFYDADSSSYVTKAEFKA 320
            M+SA+ATDL+QYPISISGDQIVQNIIQVAQSDGI+AVSLDHDFYGISQDGRVFSMASFRVVESGPNTNTGTLELHVYNSDGVSVPILTIGEDGTTIEGSLNVKGGHTS ETTSVVVEDKDM+LASGATSV+HLD+GGIILGT ESGTK+MLYDLDGDMWKSNIGIN DTGAAFT+GDAQTIL+GTG TIG VSLT+GSLQLAPDISLGT GL IG+ISVTPLGGLVIGSPDGSDVDSTVVLDKSGLTI E+INLGVDSGLSIGSNVLLDEQGLYLKNTEA+LYLGQTGWKIAYDSSSQHLLFEFYDA SSSYVTKAEFKA
Sbjct:    1 MSSAYATDLSQYPISISGDQIVQNIIQVAQSDGIDAVSLDHDFYGISQDGRVFSMASFRVVESGPNTNTGTLELHVYNSDGVSVPILTIGEDGTTIEGSLNVKGGHTSLETTSVVVEDKDMILASGATSVDHLDQGGIILGTDESGTKNMLYDLDGDMWKSNIGINVDTGAAFTVGDAQTILDGTGLTIGGVSLTEGSLQLAPDISLGTEGLAIGDISVTPLGGLVIGSPDGSDVDSTVVLDKSGLTIGEEINLGVDSGLSIGSNVLLDEQGLYLKNTEAALYLGQTGWKIAYDSSSQHLLFEFYDAGSSSYVTKAEFKA 320
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11988.1692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNK2_ESV1K1.990e-20692.81EsV-1-71 n=2 Tax=root TaxID=1 RepID=Q8QNK2_ESV1K[more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11988contigEcto-sp13_S_contig11988:1311..2273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11988.1692.1mRNA_Ecto-sp13_S_contig11988.1692.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11988 1311..2273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11988.1692.1 ID=prot_Ecto-sp13_S_contig11988.1692.1|Name=mRNA_Ecto-sp13_S_contig11988.1692.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=321bp
MTSAFATDLTQYPISISGDQIVQNIIQVAQSDGINAVSLDHDFYGISQDG
RVFSMASFRVVESGPNTNTGTLELHVYNSDGVSVPILTIGEDGTTIEGSL
NVKGGHTSFETTSVVVEDKDMVLASGATSVEHLDKGGIILGTGESGTKDM
LYDLDGDMWKSNIGINFDTGAAFTIGDAQTILNGTGFTIGEVSLTDGSLQ
LAPDISLGTAGLEIGNISVTPLGGLVIGSPDGSDVDSTVVLDKSGLTICE
KINLGVDSGLSIGSNVLLDEQGLYLKNTEASLYLGQTGWKIAYDSSSQHL
LFEFYDADSSSYVTKAEFKA*
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