prot_Ecto-sp13_S_contig62034.16922.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig62034.16922.1
Unique Nameprot_Ecto-sp13_S_contig62034.16922.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length43
Homology
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Match: D8LDV8_ECTSI (Ribose-5-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV8_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 4.090e-18
Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    1 VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHS 43
            VERLGELLK+GELKDIVAIPTSIRTKEQAESLDIPLVTLDTHS
Sbjct:   38 VERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHS 80          
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Match: A0A7S0ANE5_9STRA (Ribose-5-phosphate isomerase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ANE5_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 5.850e-18
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHS 43
            VER+GELLK+GELKDIV IPTS+RTKEQAESLDIPLVTLDTHS
Sbjct:   41 VERVGELLKSGELKDIVCIPTSVRTKEQAESLDIPLVTLDTHS 83          
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Match: A0A7S3A262_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A262_9RHOD)

HSP 1 Score: 77.0 bits (188), Expect = 1.230e-16
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0
Query:    1 VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTH 42
            VERLGE LK+GELKDIVAIPTSIRTKEQAE LDIPLVTLDTH
Sbjct:   77 VERLGEKLKSGELKDIVAIPTSIRTKEQAEGLDIPLVTLDTH 118          
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Match: A0A7S1TKQ2_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKQ2_9RHOD)

HSP 1 Score: 78.6 bits (192), Expect = 2.450e-16
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    1 VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTH 42
            VERLGE LK+GELKDIVAIPTSIRTKEQAESLDIPLVTLDTH
Sbjct:   88 VERLGEKLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTH 129          
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Match: A0A7S3A353_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A353_9RHOD)

HSP 1 Score: 77.0 bits (188), Expect = 3.110e-16
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0
Query:    1 VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTH 42
            VERLGE LK+GELKDIVAIPTSIRTKEQAE LDIPLVTLDTH
Sbjct:   77 VERLGEKLKSGELKDIVAIPTSIRTKEQAEGLDIPLVTLDTH 118          
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Match: A0A7S0T664_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T664_9RHOD)

HSP 1 Score: 77.4 bits (189), Expect = 7.020e-16
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    1 VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTH 42
            VERLG+ LK+GELKDIVAIPTSIRTKEQAESLDIPLVTLDTH
Sbjct:   93 VERLGQKLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTH 134          
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Match: A0A7S1WNQ4_ALECA (Ribose-5-phosphate isomerase n=2 Tax=Sar TaxID=2698737 RepID=A0A7S1WNQ4_ALECA)

HSP 1 Score: 76.6 bits (187), Expect = 7.400e-16
Identity = 38/43 (88.37%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHS 43
            VER+GELLK+GELKDI+AIPTSIRTKEQAESL IPL TLDTHS
Sbjct:   37 VERVGELLKSGELKDIIAIPTSIRTKEQAESLGIPLATLDTHS 79          
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Match: A0A7S3A473_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A473_9RHOD)

HSP 1 Score: 77.0 bits (188), Expect = 8.150e-16
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0
Query:    1 VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTH 42
            VERLGE LK+GELKDIVAIPTSIRTKEQAE LDIPLVTLDTH
Sbjct:   77 VERLGEKLKSGELKDIVAIPTSIRTKEQAEGLDIPLVTLDTH 118          
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Match: A0A7S2W0Z9_9STRA (Ribose-5-phosphate isomerase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W0Z9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 9.780e-16
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHS 43
            VERLG+LL++GELKDIVAIPTSIRTKEQAESL IPLVTLDTHS
Sbjct:   85 VERLGQLLESGELKDIVAIPTSIRTKEQAESLKIPLVTLDTHS 127          
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Match: A0A7S0CHS3_9STRA (Ribose-5-phosphate isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHS3_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.170e-15
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHS 43
            VERLG+LL +GELKDIVAIPTSIRTKEQAESL IPLVTLDTHS
Sbjct:   72 VERLGQLLSSGELKDIVAIPTSIRTKEQAESLGIPLVTLDTHS 114          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62034.16922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDV8_ECTSI4.090e-1897.67Ribose-5-phosphate isomerase n=1 Tax=Ectocarpus si... [more]
A0A7S0ANE5_9STRA5.850e-1890.70Ribose-5-phosphate isomerase (Fragment) n=1 Tax=Mi... [more]
A0A7S3A262_9RHOD1.230e-1692.86Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus ma... [more]
A0A7S1TKQ2_9RHOD2.450e-1695.24Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus ... [more]
A0A7S3A353_9RHOD3.110e-1692.86Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus ma... [more]
A0A7S0T664_9RHOD7.020e-1692.86Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus ... [more]
A0A7S1WNQ4_ALECA7.400e-1688.37Ribose-5-phosphate isomerase n=2 Tax=Sar TaxID=269... [more]
A0A7S3A473_9RHOD8.150e-1692.86Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus ma... [more]
A0A7S2W0Z9_9STRA9.780e-1690.70Ribose-5-phosphate isomerase n=1 Tax=Eucampia anta... [more]
A0A7S0CHS3_9STRA1.170e-1590.70Ribose-5-phosphate isomerase n=1 Tax=Proboscia ine... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1360coord: 1..43
e-value: 1.1E-9
score: 39.9
NoneNo IPR availablePANTHERPTHR43748:SF3RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATEDcoord: 1..43
NoneNo IPR availablePANTHERPTHR43748FAMILY NOT NAMEDcoord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig62034contigEcto-sp13_S_contig62034:394..522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig62034.16922.1mRNA_Ecto-sp13_S_contig62034.16922.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig62034 394..522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig62034.16922.1 ID=prot_Ecto-sp13_S_contig62034.16922.1|Name=mRNA_Ecto-sp13_S_contig62034.16922.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=43bp
VERLGELLKNGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHS
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