mRNA_Ecto-sp13_S_contig6189.16894.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6189.16894.1
Unique NamemRNA_Ecto-sp13_S_contig6189.16894.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A6H5LKM9_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKM9_9PHAE)

HSP 1 Score: 501 bits (1291), Expect = 4.720e-171
Identity = 277/283 (97.88%), Postives = 280/283 (98.94%), Query Frame = 3
Query:  600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLFHMFMQQXXXXXXXXXXXXXXXXMGGMPFHFG 1448
            L EAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEAL VDKTN+SFNSKLYCNRAAAYAKLSKH+EAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSK+DEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLF MFMQQXXXXXXXXXXXXXXXXMGGMPFHFG
Sbjct:  266 LFEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALTVDKTNRSFNSKLYCNRAAAYAKLSKHKEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKSDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLFQMFMQQXXXXXXXXXXXXXXXXMGGMPFHFG 548          
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A836CK93_9STRA (Heat shock protein 40 like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK93_9STRA)

HSP 1 Score: 299 bits (765), Expect = 2.070e-92
Identity = 164/289 (56.75%), Postives = 205/289 (70.93%), Query Frame = 3
Query:  600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGME------IDPSMLFHMFMQQXXXXXXXXXXXXXXXXMGGMPFHFG 1448
            L EAAR DPDN EY  LI++ + ME+TKE GNKAFKA  ++ AI +W EAL +D +NK +N+KLY NRA A A+L +H+EA   A  A++ D TY+KA+ RRAASL+ +GGVE LEAA RDYEK+ DM+    + ++Q K+     A+KQA+RKDYYK+LGV R AD+  IKKAYRKAALK+HPDRQ+ K + E+ +A KVFR++ +AYEVLSDP KK RYDSGVDLEDLDNP+AGHG GH          IDP++LF MFMQQ                 GGMPFHFG
Sbjct:  229 LAEAARHDPDNKEYITLIRRARAMEATKERGNKAFKAGQMQEAIAAWTEALAMDPSNKLYNAKLYFNRANALARLRQHREAADNAGLAIACDDTYSKAYMRRAASLFALGGVEELEAAIRDYEKVSDMLDAAGRADVQDKLHSANVALKQARRKDYYKILGVQRDADEETIKKAYRKAALKWHPDRQNGKEETERAEAEKVFREVNDAYEVLSDPAKKNRYDSGVDLEDLDNPYAGHG-GHXXXXXXXXXXIDPNVLFQMFMQQQAQAGRGGRRGS-----GGMPFHFG 511          
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A662YAU2_9STRA (J domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAU2_9STRA)

HSP 1 Score: 251 bits (641), Expect = 1.380e-74
Identity = 132/255 (51.76%), Postives = 178/255 (69.80%), Query Frame = 3
Query:  600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLFHMF 1364
            LQ+A R DPDNS+    IK+ + +E++KE  N AFK   +  A+  + E L +D  NK+FNSK++CNRA A ++L +H EA+ +  +A+  D  Y KA+ R+AA L  +GG+ENLE A R Y++   +V D+ QR+IQ  IR+TK  VK+AKRKD+YK+L VS++A +AEIKKAY+K ALKYHPDR + KTDE+K +A   F+DI EAY VLSDP K+ RYDSGVDLEDLD+   G G       +DPS +F MF
Sbjct:  170 LQQALRSDPDNSKCMKEIKRIRALENSKEEANDAFKTGKMADAVEKYTECLKIDPQNKAFNSKIHCNRANALSRLGRHDEAIKDCDKAIYYDHGYAKAYLRKAACLKALGGLENLEQALRVYDQASKLVGDDAQRDIQNSIRQTKLEVKKAKRKDFYKILAVSQTATEAEIKKAYKKLALKYHPDRHAGKTDEQKAEAEASFKDIGEAYAVLSDPQKRQRYDSGVDLEDLDSDFGGGGMXXXXXXVDPSQIFQMF 424          
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A4D9DHL1_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHL1_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.180e-74
Identity = 136/265 (51.32%), Postives = 180/265 (67.92%), Query Frame = 3
Query:  600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGME-------IDPSMLFHMFMQQ 1373
            LQ+A R DPDN  Y  L+KK + +++ K+ G+  F     + AI +W EAL VD + K+ N+K++ NRA AYAK+ KH EAVA+  RAL+ DP Y KA +R+A SLY +GG ENLE   RDYE    + P  ++RE   K+ + K A+K+AKRKD Y++LG+S  A + EI+KAYRK ALK+HPDR ++ ++E K  A K F+D+AEAYEVLSD  K+ RYDSG D+EDLDNPHA  G   GG         IDP++LF MFMQQ
Sbjct:  237 LQQAVRSDPDNHAYVSLLKKVRALDAKKKEGDTCFTQGQYQPAIDAWTEALAVDPSQKAVNAKMFNNRATAYAKMRKHTEAVADCKRALALDPQYLKALKRKAESLYALGGEENLEQCLRDYEVAARLAPASEEREYARKMHQVKVALKRAKRKDLYRILGLSTDATEDEIRKAYRKLALKHHPDRHTNSSEEAKAAAEKAFKDVAEAYEVLSDKEKRSRYDSGTDVEDLDNPHAQAGTHAGGFGXXXXXXGIDPNVLFQMFMQQ 501          
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A8K1CIV2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIV2_PYTOL)

HSP 1 Score: 248 bits (632), Expect = 1.070e-72
Identity = 133/252 (52.78%), Postives = 182/252 (72.22%), Query Frame = 3
Query:  609 AARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLFHMF 1364
            A R DPDNS++   IK+ + +E++KE  N AFKA  +E AI  + + L +D  NK+FN+K++CNRA A ++L +H+EA+ +  +A   D  Y KA+ R+AA L  +G +E+LE A R+YE+   +V  E +R+IQ  IR  K  +K+AKRKD+YK+LGV+++A +AE+KKAY+KAALK+HPDR S+KTDEEK  A  +F+DI EAY VLSDP KK RYD+GVDLEDLDN   G G G GGM +DPS +F MF
Sbjct:  216 ALRSDPDNSKFMREIKRIRSLENSKEDANNAFKAGKMEEAIEMYSQCLQIDPQNKAFNAKIHCNRANALSRLGRHEEAIKDCDKATYYDHGYAKAYLRKAACLKALGTLEHLEQALREYEQASKLVGGEAERDIQRSIRDIKLDIKKAKRKDFYKILGVTQNATEAELKKAYKKAALKWHPDRHSNKTDEEKAAAEAMFKDIGEAYAVLSDPQKKQRYDAGVDLEDLDNDF-GPGMG-GGMGVDPSQIFQMF 465          
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A7S2SJZ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJZ2_9STRA)

HSP 1 Score: 247 bits (630), Expect = 3.370e-72
Identity = 136/276 (49.28%), Postives = 183/276 (66.30%), Query Frame = 3
Query:  555 RCGCFFLAACYVFHSLQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGME---IDPSMLFHMFMQQ 1373
            RC  +  +       +QEA R DPDN+ YR  +KK+K ME+ KEAGN AFK    E AI  W   L +D +++++N+KLY NRA A A+L +HQ+ V + ++A+  D  Y KA+ RRA S   +G  E LE A RDYEK  ++  +  QR  + K+++ K  +K+A R D YKLLGVS+ + + EI+KAYRKAALK+HPDR SSK++EEK  A KVF+DI  A+EVL D  KK RYDSGV++ED+D+PHAGHG+GHGG     +    L  MFM Q
Sbjct:  234 RCLYYMDSVPQAIRHMQEAMRNDPDNTAYRTELKKWKHMEAEKEAGNAAFKGGRYEEAIAKWTTCLGIDASHRTYNAKLYFNRATAQARLRRHQQTVDDCTKAIELDSGYLKAYNRRAESYRILGEKEGLEQALRDYEKAAELDDEANQRSYRQKLQQVKVEIKRAGRLDLYKLLGVSKDSTEDEIRKAYRKAALKWHPDRHSSKSEEEKSNAEKVFKDINLAFEVLGDAEKKKRYDSGVEIEDIDDPHAGHGRGHGGFGGGGMSQEDLLRMFMAQ 509          
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A6G0XB60_9STRA (J domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XB60_9STRA)

HSP 1 Score: 246 bits (627), Expect = 6.940e-72
Identity = 129/238 (54.20%), Postives = 177/238 (74.37%), Query Frame = 3
Query:  600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHG 1313
            LQEA R DPDN ++   IK+ + +++ KEA N  FKA   + A+ ++ E L +D +NKS+N+KL+CNRAAA AKL+K++EA+ +  +A+  D +Y KA+ R+A  L D+GG +NLE A R+YE    +V +++QR+    IR+TK  +K+AKRKDYYK+L + ++A DA+IKKAYRK+ALKYHPDR ++KTDEEK+QA   F+D+ EAY VLSDP KK RYDSGVDLEDLDN  AG G
Sbjct:  216 LQEALRADPDNGKFVKEIKRIRALDTQKEAANDHFKAGRFQDAVEAYTECLSIDPSNKSYNAKLHCNRAAALAKLNKNEEAIRDCDKAIYYDSSYVKAYLRKAQCLKDIGGKDNLEQALREYETASKLVGEDQQRQYAQYIRETKLLLKKAKRKDYYKILEIPQTATDADIKKAYRKSALKYHPDRHANKTDEEKKQAEIDFKDVGEAYAVLSDPQKKQRYDSGVDLEDLDNDMAGPG 453          
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A7S2B4H4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4H4_9STRA)

HSP 1 Score: 245 bits (626), Expect = 7.610e-72
Identity = 144/290 (49.66%), Postives = 185/290 (63.79%), Query Frame = 3
Query:  600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVEN-----LEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAG--HGQGHGGMEIDPSMLFHMFMQQXXXXXXXXXXXXXXXXMGGMPFHFG 1448
            LQEA R DPDN  YR  IKK++ +E+ KEAGN AFKA +L+ AI  W   L VD +N+ FN+KLY NR  AY+KL +HQEAV + +RA+  DP Y KA+ RRA SL  + G  N     L+ A RDYEK M++  +E QR+ + K+R  +  +K+  RKD+YK+LGVS+ A D EIKKAY+K AL+ HPDR ++K + E+E A   F+++ EA EVL D  K+  YDSGV+ EDLDNPHAG  HG G GGM+ D   L  MFM Q                 GG  FHFG
Sbjct:  222 LQEAMRNDPDNKTYRTEIKKWRALEAQKEAGNAAFKAGNLQEAITEWTACLEVDPSNRPFNAKLYANRGTAYSKLRRHQEAVDDCTRAIDLDPMYLKAYNRRAESLRCLDGEPNEMKVHLQGALRDYEKAMELDSEENQRDYKTKMRTVQTEIKRVGRKDFYKILGVSKDATDDEIKKAYKKGALRLHPDRMANKPEAEREAATAKFKELNEANEVLLDREKRQLYDSGVEPEDLDNPHAGRSHGGGMGGMDHDD--LMRMFMHQQAGMGGMGGSPFGRGGGGG-GFHFG 508          
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: G4YV87_PHYSP (J domain-containing protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=G4YV87_PHYSP)

HSP 1 Score: 238 bits (606), Expect = 1.420e-69
Identity = 125/247 (50.61%), Postives = 173/247 (70.04%), Query Frame = 3
Query:  624 PDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLFHMF 1364
            PDNS+    IK+ + +ES+KE  N AFKA  +  A+  +   L +D  NK+FNSK++CNRA A ++L++H+EA+ +  +A+  D  Y KA+ R+AA L  +GG+ENLE A R Y++   +V D+ QR+IQ  IR+TK  +K+AKRKDYYK+L VS+SA +AEIKKAY++ ALK+HPDR + K++E+K +A   F+DI EAY VLSD  K+ RYDSGVDLEDLDN   G G       +DPS +F MF
Sbjct:  168 PDNSKCMKEIKRIRHLESSKEDANNAFKAGKMAEAVEMYTSCLTIDPQNKAFNSKIHCNRANALSRLNRHEEAIKDCDKAIYYDHGYAKAYLRKAACLKALGGLENLEQALRVYDQASKLVGDDAQRDIQNSIRQTKLDIKKAKRKDYYKILNVSQSATEAEIKKAYKRLALKFHPDRHAGKSEEQKAEAEAAFKDIGEAYAVLSDAQKRQRYDSGVDLEDLDNDFGGGGMXXXXXXVDPSQIFQMF 414          
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A024TD26_9STRA (J domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TD26_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.420e-69
Identity = 125/236 (52.97%), Postives = 170/236 (72.03%), Query Frame = 3
Query:  600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAG 1307
            LQEA R DPDN+ +   IK+ + +++ KEA N AFK    + A+ ++   L +D  NKS+N+KL+CNRAAA AKL K+ EA+ +  +A+  D +Y KA+ R+A  L D+GG +NLE A R+YE    +V +++QR+    IR+TK  +K+AKRKDYYK+L + + A DA+IKKAYRK+ALK+HPDR ++KTDEEK+QA   F+D+ EAY VLSDP KK RYDSGVDLEDLDN   G
Sbjct:  216 LQEALRADPDNARFVKEIKRIRALDTQKEAANDAFKGGRYQEAVEAYTACLSIDPANKSYNAKLHCNRAAALAKLDKNDEAIRDCDKAIYYDSSYVKAYLRKAQCLKDLGGKDNLEQALREYETASKLVGEDQQRQYAQYIRETKLLIKKAKRKDYYKILDIGQHASDADIKKAYRKSALKFHPDRHANKTDEEKKQAEIDFKDVGEAYAVLSDPQKKQRYDSGVDLEDLDNDMGG 451          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LKM9_9PHAE4.720e-17197.88J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A836CK93_9STRA2.070e-9256.75Heat shock protein 40 like protein n=1 Tax=Tribone... [more]
A0A662YAU2_9STRA1.380e-7451.76J domain-containing protein (Fragment) n=1 Tax=Not... [more]
A0A4D9DHL1_9STRA2.180e-7451.32J domain-containing protein n=2 Tax=Monodopsidacea... [more]
A0A8K1CIV2_PYTOL1.070e-7252.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2SJZ2_9STRA3.370e-7249.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6G0XB60_9STRA6.940e-7254.20J domain-containing protein n=2 Tax=Aphanomyces Ta... [more]
A0A7S2B4H4_9STRA7.610e-7249.66Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
G4YV87_PHYSP1.420e-6950.61J domain-containing protein n=21 Tax=Peronosporace... [more]
A0A024TD26_9STRA1.420e-6952.97J domain-containing protein n=5 Tax=Aphanomyces Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6189contigEcto-sp13_S_contig6189:359..6007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score466.1
Seed ortholog evalue1.1e-128
Seed eggNOG ortholog2880.D7FNP6
Model size1451
KEGG koko:K09527
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.chaperone cofactor-dependent protein refolding
EggNOG OGsCOG0484@1,KOG0550@2759
Cds size783
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6189.16894.1prot_Ecto-sp13_S_contig6189.16894.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6189 1905..6007 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463861.7302732-UTR-Ecto-sp13_S_contig6189:358..4961681463861.7302732-UTR-Ecto-sp13_S_contig6189:358..496Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6189 359..496 +
1681463861.7421033-UTR-Ecto-sp13_S_contig6189:1374..19041681463861.7421033-UTR-Ecto-sp13_S_contig6189:1374..1904Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6189 1375..1904 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463861.7533271-CDS-Ecto-sp13_S_contig6189:1904..20571681463861.7533271-CDS-Ecto-sp13_S_contig6189:1904..2057Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6189 1905..2057 +
1681463861.763063-CDS-Ecto-sp13_S_contig6189:2755..28611681463861.763063-CDS-Ecto-sp13_S_contig6189:2755..2861Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6189 2756..2861 +
1681463861.7721379-CDS-Ecto-sp13_S_contig6189:3105..31811681463861.7721379-CDS-Ecto-sp13_S_contig6189:3105..3181Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6189 3106..3181 +
1681463861.7820177-CDS-Ecto-sp13_S_contig6189:3586..36561681463861.7820177-CDS-Ecto-sp13_S_contig6189:3586..3656Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6189 3587..3656 +
1681463861.7911792-CDS-Ecto-sp13_S_contig6189:3977..41331681463861.7911792-CDS-Ecto-sp13_S_contig6189:3977..4133Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6189 3978..4133 +
1681463861.8012235-CDS-Ecto-sp13_S_contig6189:4772..48671681463861.8012235-CDS-Ecto-sp13_S_contig6189:4772..4867Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6189 4773..4867 +
1681463861.8146482-CDS-Ecto-sp13_S_contig6189:5880..60071681463861.8146482-CDS-Ecto-sp13_S_contig6189:5880..6007Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6189 5881..6007 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6189.16894.1

>prot_Ecto-sp13_S_contig6189.16894.1 ID=prot_Ecto-sp13_S_contig6189.16894.1|Name=mRNA_Ecto-sp13_S_contig6189.16894.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=261bp
MESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYA
KLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYE
KLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKK
AYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDS
GVDLEDLDNPHAGHGQGHGGMEIDPSMLFHMFMQQGGGGMGGGRRGGGGG
GMGGMPFHFG*
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mRNA from alignment at Ecto-sp13_S_contig6189:359..6007+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6189.16894.1 ID=mRNA_Ecto-sp13_S_contig6189.16894.1|Name=mRNA_Ecto-sp13_S_contig6189.16894.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5649bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6189:359..6007+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCCGATTCAAGGAGTCGCTCTCGGCGCTTCAGCAGGGGCTGATGGTGGA CCCCAACAACGCGGACCAGATCAAGGAGAAGACCAACACGGAGATGTGCG TGCGCAAGGTGGACCGAGCGACGGATTCGCTCGCGCAGGTGCGATAAAGA CGGTGGTGGCCGGGAGTGTTTGGTTGCGGCAATGGTGGTGATGGTGTTGG GTTGTCGATCGTGGAGTGACGGTCGACTGTAGCGTGGCGGTGGTGGTTGT GGTGGCGATATCAGTGGTGAAGTCACGGTCGACTGGTGTAGCGTGGCGGT GGTGGTGGACGGCAGTGCGCGAAGTCAGAGGGGTGCCCTACAGGCGATGG ATTTGGCGTGAAGCGACGGTCGACATGTAGTGTGGCAGTGATGGTGGTGG TGGTGGTGGTGACGGCAGTGCGCGAAACCTGGGGTTGTGGTAAGGGTGAT GAGTCTGGCGTGCTTTTGCTACTGAGGGCGCAATGCGAGAAAGTGTCTTG TCTGTCTCGCCAGTCTACCCTAGGGTGACGAAAGACGACCTTGCTGGAAT GCGGCTATAGAGAAGTGACTAGGGTGTGGACCAACAAGCCATAAAGCAGG ATAGCCCCCGTGGGGAAATATGGTCTACCGTGGTGCTTACGCCCAACGCT TGCTTAAATTTGGGTATCCCCCCGATCGTGTTTTTTCCTTGGACCTCTTG CGGTGGTGCTGGTTCTCGTGTTTACTGCTGCTGCTGCCGCCGGCGCTGTT GCTATTGCTTTTCCCCTGTTTCGAGTGGTGGTGGTGAAGCCCAACGCTTC TTTGCTCCTTGATAAACCCAAAAGCCTACTCACAGAGAGCGCTGTCTCTC TCCTCCTCTCCCCCTCCCTCTCCTCTCTTTGTCCTCGCTGGTTCTTCGCT TTGTCCCTTTCGGACGCGTCTTCGTCATTTGTCGCTCCTTCTTTCGGTAT CTCGCGCCTTCTGTTTTCGTTCTCTGTCTCCCTCTGTGTGTCTCGGTGGT GTTTTCGCAAGAACAGGGCAAGCCCGCGAGAGCGGCCTCGATTCTGGAGG AGTGTCTCGTCAAGGCTCCCCAGTCGCGGGAGCTCAAGCTCATCAAGGTG GAGTGCCTGATGGGCATGGGCAAGCACGAGGAGGCGTACGCGATGAGCTC CGCTCTCATCCGAAACAGCCAGAACAACTCCAAGCTCCTCATCACGCGAG CGCGGTGCCTCTACCTCATGGGGAATCTCGACAGTGCGATCAAGCACCTT CAGGCATGTAGAGGAAGGAGACCCACCCCCGCTACGCACTGTCCACGGGT AGTTTTGCTGTATGTAGAATGTAGAGTGAAAACATCGCACAACGCGAAAT AGACGGCCTCCGTACTCGTTCGCTTCACCCACGACCCACACGCGCGATCA GTTGGCTCGTGTGTGTCTTTGTCGCGTGCCCACGGTGCGGATGCTTTTTT TTGGCGGCGTGCTACGTGTTCCACTCTCTGCAGGAGGCCGCGAGACAAGA CCCGGACAACTCCGAGTACAGAGGGCTGATCAAGAAGTACAAGCTGATGG AGAGCACGAAGGAGGCGGGGAATAAGGCCTTCAAGGCTAACGACCTCGAG GGGGCCATCAGGTCGTGGGGCGAGGCCTTGATGGTGGACAAGACGAACAA GTCGTTCAACTCTAAGCTTTACTGTAACCGCGCGGCGGCCTACGCGAAGG TGACGATGATGATTGACATGGATCGATCCGTGGTAGGGTCGGGATTTGGT GAGGACGATGTACATGGATCGATCCGTCTTACCGTCGGGGTTTGGTCAGG ATGATGTACATGGATCGATCCGTGGTAGGTTCGGGGTTTGGTCAGGACGA TGGGCATGGATCGATCCGTCTTAAGCATCGGGGTTTGGTCAGAACGATGG GCATGGATCGATCTGTCTTAAGCGTCGGGGTTTGGTGAAGACGATGTGCA TGGGTTGTTACGTCTTAGGGTCGGGGTTTGGCGAGGATGATGGGCATGGA TCGATCCGTCTTAGGGTCGGGTTTGTCCGCCATGTCTCGAGGGTGGGGGT TCGTTTGTTTGTCGCGTGTCATGACTAAGAGTAGCCGCTTTTTGCTGCCG GCTTGTGGGCCGGCCGGCCGGCAGGCCTCGAAGCTTTGTTTCTCGTGAAA TGTGCGTGTTGCGTTGATTGTGACATGTTCTTGTGCGTCTCTTCCTGCTG CAGCGTCATGATAGCGAGGCTCTTTGCAGCAGCAGTGGTTGGTCGATGCC CTCTGTCTCTTGTCGTTGCCATGCTGTTATGCCTCCATCCTTTGGCGCTC ACATATTCGGCACCGTGTATTAGCTCCCTCTTCCTCGTCGTTGTCCTTTG CCGTTGCATGATCTTTGATCGTTGCCGCTCTTGATTATTGATTCCAGTTG TCGAAGCACCAGGAGGCCGTGGCGGAAGCTTCGCGAGCGTTGAGCGACGA CCCGACGTACACGAAAGCCTTCGAGCGGCGAGCGGCCAGCCTGTACGACA TGGGTAAGACAGGAGACATGGTTAGTAACGGAAGGCATTATGTGTCCCGC TGCCCCTCCTGACCACCCCTCTCCTTCCCGCAGCATCGAAAATGGCACCT GAAGTGCATACCTCCCCTTACCCCTAGCGTTTTTGTTCTCGCTCTCCCCC CGCGTCCTCTATCGGTTGTTTCGCGTCGTGATGCTCTCTTGTTTTATTAT GGTCCCGGGTGTGATGTGATGTGATGTGATGGCGATGACCGATGAAGGCG GAGTCGAGAACCTCGAGGCGGCGTGTCGGGATTACGAGAAACTAATGGAT ATGGTCCCCGACGAGAAGCAGAGGTGCGCGTTCGTTTCATTCGTCACTGG CATGTGATGCCTACAATGGCGATGGCTTCTTTTGATGTGTTCCAAGTATT TGATGACACTAACAAATGTCCGTGGTGGTTCTTTTTGTAGCCTCTCCTGC GGTGCATTGCTGGCACATTAAGAAAGGTTAAATATGTATGACACACCGGG AAAGCCGGTTTGGAGGATTCAACTGTTTGCAATCCAGTTGTCTTTGCCAG CGCCAGGGTGCCGAGACGATATTCAAGCCTGTATACAGGGCCTTTTTTTT TTTTTTTTTTTCCTTTGTTTGGCTTGCCAAGAAGGATTGGAGTCGGTATG TCGCCGCTGTTTTTTGCGTCAGATGTAATGATTACGAGCGTTCATCCGTG GCCCTTGTGAATGTTATGCTTTTGTTAGGGAAATCCAGGGGAAAATCCGC AAGACGAAGGCTGCAGTGAAGCAGGCGAAGAGGAAAGACTACTACAAGGT ACATACGCAACGGAACTGCTGCTATTGTTGTTGCTGTTCTCGATTTTCTT TTCTAAATGGCGTTCCCTTGCCCGAAACTCTGGCTCGTATTGTTGTGACT GTAGTCTTCGAAATCTCGATGTTGTTAAACCTTGATTATTGGCGTAGAAG CGTGCCACGAGTGCCACTGCTGCTGTTGGTTGAGGATATATTTGTCACGT TCTTTCATGGTTTTGTCGAGCATGCCCTCGCAATCCTTTCTCTTCAGTTT GTAGCCCCTGTCATCGAGAATCTGAGTTAGAATATCGCGCCCATGGAATG AATTCAAAAACCGAACCAGCTGCTAGGGGTGTCTCGAAGCGCGGACGACG CGGAGATCAAGAAGGCCTACCGCAAGGCCGCGCTCAAGTACCATCCGGAC AGACAGAGCAGCAAGACCGACGAGGAGAAGGAGCAAGCGGGGAAGGTGTT CCGAGACATTGCGGAGGCATACGAGGTGAAGAGGGCCGGGGAAGGGGGTA CACGACAGGCAGGCGATTGGGGGGGGGGGTGGGCGGCGTACTCACAGCAG TCGTGCATGCCGTAGTCGTGAGATCATTGACCTCGCATCCCTACAAGGCC GGGACGGAGTACGCCGGGCTCTCACCGGACCAGGCCAGCACATCAACAAG CGCGAAGCGCCGTGATGTGTTTGGCTTCTTGCGCTTACTTTCCTTGCATA CGTATGACAGCTAAGACTGAAATGGTTTCGTTTCTGGTCCTTTCACTTCC AGAGACAGTTGTAAGCACTGTGTAACTGTCTCGAGGGTGCTTGACCAATT TAACGCAACGCGGTGCGATTTATCCCCTTTTGCGCGGAGTGGGGGTCCTC GACCCCGCCAACATAACCCACTCGATCACCAGTTGGTATGTATCCCTTTC CTCAAGGTGGTGGTAGTTTGGCAGAGCCTCACCAGTTCTACATCTGCCGA GCACCTCCGACTTTTAGAACGGAGGAAAGACATTAGTTTATCTCTCCTTC CAGTTCGCTACTTCCACAGCAGGGGTACAGGTTGGTTCAAAACTTTGTTT CTTTTTTCCCTCCTCCTGCCAAAACTCTCGAGCCGCCCTCTCTGCCCCGT CCTTTTTGTCTCAGGTGTTATCGGATCCTACGAAGAAGGGTCGGTACGAC TCGGGAGTGGATCTTGAGGACCTTGACAACCCGCACGCGGGTCACGGGCA AGGGCACGGGTAAGCTGAGGGGAGGGGAGGGCAGGGTGTGTGTGCCTGCG AAGTTTGCAGTGAAGACACTGTTGCGAGCAGAGGGACAACGTTAGATGCA CTCTCAGCAGTATCTGGTCGTGAGGATCTCGGGGAGTGCGTGTTGGGAAT TTCGTGTGTTGTGGGTTACTCCCCCCCCCCCCTCCCGTGAATCTAGTGGG CTCCTTTTTCGTGGATGACAAGCCTCATTGAACGGATTGCGCTCCTCGGT AGTTGTGTACTGCGAGAGCCACCCCGTGATTTTCCGCGTGACTTGTTCTC CAACAACCCAAAAACTTTGAGACCTCAACAATCGGAAATTCGTTCGTTTC ACCTCTCTGTGTGGGGGGGTTCATTTCGCAGATTGAAATTCTCCTCTGTG GGTTCATCCCCCAAAGATTGCTGTCTGTTGCGTGGGGTCCCACGATCGAT CGAGATGGCGTTGTTCTAGCGGGTGTAGTGCGAGACCACTTTGGAGATTT TCCCCCTTTTTTATCGGGGCAAGTGATAAGGTTGCGCGCACAATGCAGAA TAGACCGTATGTACGGGCTTTGGAGGCACAGCGAGTGAGACGCGATCGTG ACACGCACAATGAGTTTTCTTTGTAGGCGACAAGCAAGACTTTCCCGAGG ATTGGTCGACTCCCACTTTATTCCCGTAAACGGCATTTCGATGGCGGATA CGTGCGGACGAGTGCAGCAGTCAGCTTCCTCGCTCTGCTTGCTACAGATG CAGCCCACCTTGTAGATCTGGAGGGTCATAAATTGAGGAGGCTCCCGCAT CGTTGTTGACCTGCCGTTGTTTCGACAGATGTGGCGTTGTCCCTGTGCCT TCACTTCCAATCAGCGCTCGGTGTGTTGTCGTTTGTTCCATAGGACCACT TTTTGTCTAGTTCCTCTCGTTGAGAGTTGTTCGTAGCACCTCTCCCCCCC CCCCCCCTCCCCCGCCCCTGCCCCCCTCCCGGCGCCCCCCTTGTCGATAT TCTGTGCGCCTCCTTTTCGCAGCGGCATGGAGATCGACCCTTCGATGCTG TTCCATATGTTCATGCAACAAGGAGGAGGGGGCATGGGGGGTGGGAGAAG GGGGGGCGGAGGTGGAGGCATGGGGGGCATGCCATTCCATTTCGGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6189:359..6007+

>mRNA_Ecto-sp13_S_contig6189.16894.1 ID=mRNA_Ecto-sp13_S_contig6189.16894.1|Name=mRNA_Ecto-sp13_S_contig6189.16894.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=783bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6189:359..6007+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGAGCACGAAGGAGGCGGGGAATAAGGCCTTCAAGGCTAACGACCT
CGAGGGGGCCATCAGGTCGTGGGGCGAGGCCTTGATGGTGGACAAGACGA
ACAAGTCGTTCAACTCTAAGCTTTACTGTAACCGCGCGGCGGCCTACGCG
AAGTTGTCGAAGCACCAGGAGGCCGTGGCGGAAGCTTCGCGAGCGTTGAG
CGACGACCCGACGTACACGAAAGCCTTCGAGCGGCGAGCGGCCAGCCTGT
ACGACATGGGCGGAGTCGAGAACCTCGAGGCGGCGTGTCGGGATTACGAG
AAACTAATGGATATGGTCCCCGACGAGAAGCAGAGGGAAATCCAGGGGAA
AATCCGCAAGACGAAGGCTGCAGTGAAGCAGGCGAAGAGGAAAGACTACT
ACAAGCTGCTAGGGGTGTCTCGAAGCGCGGACGACGCGGAGATCAAGAAG
GCCTACCGCAAGGCCGCGCTCAAGTACCATCCGGACAGACAGAGCAGCAA
GACCGACGAGGAGAAGGAGCAAGCGGGGAAGGTGTTCCGAGACATTGCGG
AGGCATACGAGGTGTTATCGGATCCTACGAAGAAGGGTCGGTACGACTCG
GGAGTGGATCTTGAGGACCTTGACAACCCGCACGCGGGTCACGGGCAAGG
GCACGGCGGCATGGAGATCGACCCTTCGATGCTGTTCCATATGTTCATGC
AACAAGGAGGAGGGGGCATGGGGGGTGGGAGAAGGGGGGGCGGAGGTGGA
GGCATGGGGGGCATGCCATTCCATTTCGGGTGA
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