mRNA_Ecto-sp13_S_contig6189.16894.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A6H5LKM9_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKM9_9PHAE) HSP 1 Score: 501 bits (1291), Expect = 4.720e-171 Identity = 277/283 (97.88%), Postives = 280/283 (98.94%), Query Frame = 3
Query: 600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLFHMFMQQXXXXXXXXXXXXXXXXMGGMPFHFG 1448
L EAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEAL VDKTN+SFNSKLYCNRAAAYAKLSKH+EAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSK+DEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLF MFMQQXXXXXXXXXXXXXXXXMGGMPFHFG
Sbjct: 266 LFEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALTVDKTNRSFNSKLYCNRAAAYAKLSKHKEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKSDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLFQMFMQQXXXXXXXXXXXXXXXXMGGMPFHFG 548
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A836CK93_9STRA (Heat shock protein 40 like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK93_9STRA) HSP 1 Score: 299 bits (765), Expect = 2.070e-92 Identity = 164/289 (56.75%), Postives = 205/289 (70.93%), Query Frame = 3
Query: 600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGME------IDPSMLFHMFMQQXXXXXXXXXXXXXXXXMGGMPFHFG 1448
L EAAR DPDN EY LI++ + ME+TKE GNKAFKA ++ AI +W EAL +D +NK +N+KLY NRA A A+L +H+EA A A++ D TY+KA+ RRAASL+ +GGVE LEAA RDYEK+ DM+ + ++Q K+ A+KQA+RKDYYK+LGV R AD+ IKKAYRKAALK+HPDRQ+ K + E+ +A KVFR++ +AYEVLSDP KK RYDSGVDLEDLDNP+AGHG GH IDP++LF MFMQQ GGMPFHFG
Sbjct: 229 LAEAARHDPDNKEYITLIRRARAMEATKERGNKAFKAGQMQEAIAAWTEALAMDPSNKLYNAKLYFNRANALARLRQHREAADNAGLAIACDDTYSKAYMRRAASLFALGGVEELEAAIRDYEKVSDMLDAAGRADVQDKLHSANVALKQARRKDYYKILGVQRDADEETIKKAYRKAALKWHPDRQNGKEETERAEAEKVFREVNDAYEVLSDPAKKNRYDSGVDLEDLDNPYAGHG-GHXXXXXXXXXXIDPNVLFQMFMQQQAQAGRGGRRGS-----GGMPFHFG 511
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A662YAU2_9STRA (J domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAU2_9STRA) HSP 1 Score: 251 bits (641), Expect = 1.380e-74 Identity = 132/255 (51.76%), Postives = 178/255 (69.80%), Query Frame = 3
Query: 600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLFHMF 1364
LQ+A R DPDNS+ IK+ + +E++KE N AFK + A+ + E L +D NK+FNSK++CNRA A ++L +H EA+ + +A+ D Y KA+ R+AA L +GG+ENLE A R Y++ +V D+ QR+IQ IR+TK VK+AKRKD+YK+L VS++A +AEIKKAY+K ALKYHPDR + KTDE+K +A F+DI EAY VLSDP K+ RYDSGVDLEDLD+ G G +DPS +F MF
Sbjct: 170 LQQALRSDPDNSKCMKEIKRIRALENSKEEANDAFKTGKMADAVEKYTECLKIDPQNKAFNSKIHCNRANALSRLGRHDEAIKDCDKAIYYDHGYAKAYLRKAACLKALGGLENLEQALRVYDQASKLVGDDAQRDIQNSIRQTKLEVKKAKRKDFYKILAVSQTATEAEIKKAYKKLALKYHPDRHAGKTDEQKAEAEASFKDIGEAYAVLSDPQKRQRYDSGVDLEDLDSDFGGGGMXXXXXXVDPSQIFQMF 424
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A4D9DHL1_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHL1_9STRA) HSP 1 Score: 252 bits (644), Expect = 2.180e-74 Identity = 136/265 (51.32%), Postives = 180/265 (67.92%), Query Frame = 3
Query: 600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGME-------IDPSMLFHMFMQQ 1373
LQ+A R DPDN Y L+KK + +++ K+ G+ F + AI +W EAL VD + K+ N+K++ NRA AYAK+ KH EAVA+ RAL+ DP Y KA +R+A SLY +GG ENLE RDYE + P ++RE K+ + K A+K+AKRKD Y++LG+S A + EI+KAYRK ALK+HPDR ++ ++E K A K F+D+AEAYEVLSD K+ RYDSG D+EDLDNPHA G GG IDP++LF MFMQQ
Sbjct: 237 LQQAVRSDPDNHAYVSLLKKVRALDAKKKEGDTCFTQGQYQPAIDAWTEALAVDPSQKAVNAKMFNNRATAYAKMRKHTEAVADCKRALALDPQYLKALKRKAESLYALGGEENLEQCLRDYEVAARLAPASEEREYARKMHQVKVALKRAKRKDLYRILGLSTDATEDEIRKAYRKLALKHHPDRHTNSSEEAKAAAEKAFKDVAEAYEVLSDKEKRSRYDSGTDVEDLDNPHAQAGTHAGGFGXXXXXXGIDPNVLFQMFMQQ 501
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A8K1CIV2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIV2_PYTOL) HSP 1 Score: 248 bits (632), Expect = 1.070e-72 Identity = 133/252 (52.78%), Postives = 182/252 (72.22%), Query Frame = 3
Query: 609 AARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLFHMF 1364
A R DPDNS++ IK+ + +E++KE N AFKA +E AI + + L +D NK+FN+K++CNRA A ++L +H+EA+ + +A D Y KA+ R+AA L +G +E+LE A R+YE+ +V E +R+IQ IR K +K+AKRKD+YK+LGV+++A +AE+KKAY+KAALK+HPDR S+KTDEEK A +F+DI EAY VLSDP KK RYD+GVDLEDLDN G G G GGM +DPS +F MF
Sbjct: 216 ALRSDPDNSKFMREIKRIRSLENSKEDANNAFKAGKMEEAIEMYSQCLQIDPQNKAFNAKIHCNRANALSRLGRHEEAIKDCDKATYYDHGYAKAYLRKAACLKALGTLEHLEQALREYEQASKLVGGEAERDIQRSIRDIKLDIKKAKRKDFYKILGVTQNATEAELKKAYKKAALKWHPDRHSNKTDEEKAAAEAMFKDIGEAYAVLSDPQKKQRYDAGVDLEDLDNDF-GPGMG-GGMGVDPSQIFQMF 465
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A7S2SJZ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJZ2_9STRA) HSP 1 Score: 247 bits (630), Expect = 3.370e-72 Identity = 136/276 (49.28%), Postives = 183/276 (66.30%), Query Frame = 3
Query: 555 RCGCFFLAACYVFHSLQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGME---IDPSMLFHMFMQQ 1373
RC + + +QEA R DPDN+ YR +KK+K ME+ KEAGN AFK E AI W L +D +++++N+KLY NRA A A+L +HQ+ V + ++A+ D Y KA+ RRA S +G E LE A RDYEK ++ + QR + K+++ K +K+A R D YKLLGVS+ + + EI+KAYRKAALK+HPDR SSK++EEK A KVF+DI A+EVL D KK RYDSGV++ED+D+PHAGHG+GHGG + L MFM Q
Sbjct: 234 RCLYYMDSVPQAIRHMQEAMRNDPDNTAYRTELKKWKHMEAEKEAGNAAFKGGRYEEAIAKWTTCLGIDASHRTYNAKLYFNRATAQARLRRHQQTVDDCTKAIELDSGYLKAYNRRAESYRILGEKEGLEQALRDYEKAAELDDEANQRSYRQKLQQVKVEIKRAGRLDLYKLLGVSKDSTEDEIRKAYRKAALKWHPDRHSSKSEEEKSNAEKVFKDINLAFEVLGDAEKKKRYDSGVEIEDIDDPHAGHGRGHGGFGGGGMSQEDLLRMFMAQ 509
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A6G0XB60_9STRA (J domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XB60_9STRA) HSP 1 Score: 246 bits (627), Expect = 6.940e-72 Identity = 129/238 (54.20%), Postives = 177/238 (74.37%), Query Frame = 3
Query: 600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHG 1313
LQEA R DPDN ++ IK+ + +++ KEA N FKA + A+ ++ E L +D +NKS+N+KL+CNRAAA AKL+K++EA+ + +A+ D +Y KA+ R+A L D+GG +NLE A R+YE +V +++QR+ IR+TK +K+AKRKDYYK+L + ++A DA+IKKAYRK+ALKYHPDR ++KTDEEK+QA F+D+ EAY VLSDP KK RYDSGVDLEDLDN AG G
Sbjct: 216 LQEALRADPDNGKFVKEIKRIRALDTQKEAANDHFKAGRFQDAVEAYTECLSIDPSNKSYNAKLHCNRAAALAKLNKNEEAIRDCDKAIYYDSSYVKAYLRKAQCLKDIGGKDNLEQALREYETASKLVGEDQQRQYAQYIRETKLLLKKAKRKDYYKILEIPQTATDADIKKAYRKSALKYHPDRHANKTDEEKKQAEIDFKDVGEAYAVLSDPQKKQRYDSGVDLEDLDNDMAGPG 453
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A7S2B4H4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4H4_9STRA) HSP 1 Score: 245 bits (626), Expect = 7.610e-72 Identity = 144/290 (49.66%), Postives = 185/290 (63.79%), Query Frame = 3
Query: 600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVEN-----LEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAG--HGQGHGGMEIDPSMLFHMFMQQXXXXXXXXXXXXXXXXMGGMPFHFG 1448
LQEA R DPDN YR IKK++ +E+ KEAGN AFKA +L+ AI W L VD +N+ FN+KLY NR AY+KL +HQEAV + +RA+ DP Y KA+ RRA SL + G N L+ A RDYEK M++ +E QR+ + K+R + +K+ RKD+YK+LGVS+ A D EIKKAY+K AL+ HPDR ++K + E+E A F+++ EA EVL D K+ YDSGV+ EDLDNPHAG HG G GGM+ D L MFM Q GG FHFG
Sbjct: 222 LQEAMRNDPDNKTYRTEIKKWRALEAQKEAGNAAFKAGNLQEAITEWTACLEVDPSNRPFNAKLYANRGTAYSKLRRHQEAVDDCTRAIDLDPMYLKAYNRRAESLRCLDGEPNEMKVHLQGALRDYEKAMELDSEENQRDYKTKMRTVQTEIKRVGRKDFYKILGVSKDATDDEIKKAYKKGALRLHPDRMANKPEAEREAATAKFKELNEANEVLLDREKRQLYDSGVEPEDLDNPHAGRSHGGGMGGMDHDD--LMRMFMHQQAGMGGMGGSPFGRGGGGG-GFHFG 508
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: G4YV87_PHYSP (J domain-containing protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=G4YV87_PHYSP) HSP 1 Score: 238 bits (606), Expect = 1.420e-69 Identity = 125/247 (50.61%), Postives = 173/247 (70.04%), Query Frame = 3
Query: 624 PDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAGHGQGHGGMEIDPSMLFHMF 1364
PDNS+ IK+ + +ES+KE N AFKA + A+ + L +D NK+FNSK++CNRA A ++L++H+EA+ + +A+ D Y KA+ R+AA L +GG+ENLE A R Y++ +V D+ QR+IQ IR+TK +K+AKRKDYYK+L VS+SA +AEIKKAY++ ALK+HPDR + K++E+K +A F+DI EAY VLSD K+ RYDSGVDLEDLDN G G +DPS +F MF
Sbjct: 168 PDNSKCMKEIKRIRHLESSKEDANNAFKAGKMAEAVEMYTSCLTIDPQNKAFNSKIHCNRANALSRLNRHEEAIKDCDKAIYYDHGYAKAYLRKAACLKALGGLENLEQALRVYDQASKLVGDDAQRDIQNSIRQTKLDIKKAKRKDYYKILNVSQSATEAEIKKAYKRLALKFHPDRHAGKSEEQKAEAEAAFKDIGEAYAVLSDAQKRQRYDSGVDLEDLDNDFGGGGMXXXXXXVDPSQIFQMF 414
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Match: A0A024TD26_9STRA (J domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TD26_9STRA) HSP 1 Score: 239 bits (611), Expect = 1.420e-69 Identity = 125/236 (52.97%), Postives = 170/236 (72.03%), Query Frame = 3
Query: 600 LQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAFERRAASLYDMGGVENLEAACRDYEKLMDMVPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHAG 1307
LQEA R DPDN+ + IK+ + +++ KEA N AFK + A+ ++ L +D NKS+N+KL+CNRAAA AKL K+ EA+ + +A+ D +Y KA+ R+A L D+GG +NLE A R+YE +V +++QR+ IR+TK +K+AKRKDYYK+L + + A DA+IKKAYRK+ALK+HPDR ++KTDEEK+QA F+D+ EAY VLSDP KK RYDSGVDLEDLDN G
Sbjct: 216 LQEALRADPDNARFVKEIKRIRALDTQKEAANDAFKGGRYQEAVEAYTACLSIDPANKSYNAKLHCNRAAALAKLDKNDEAIRDCDKAIYYDSSYVKAYLRKAQCLKDLGGKDNLEQALREYETASKLVGEDQQRQYAQYIRETKLLIKKAKRKDYYKILDIGQHASDADIKKAYRKSALKFHPDRHANKTDEEKKQAEIDFKDVGEAYAVLSDPQKKQRYDSGVDLEDLDNDMGG 451 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6189.16894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6189.16894.1 >prot_Ecto-sp13_S_contig6189.16894.1 ID=prot_Ecto-sp13_S_contig6189.16894.1|Name=mRNA_Ecto-sp13_S_contig6189.16894.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=261bp MESTKEAGNKAFKANDLEGAIRSWGEALMVDKTNKSFNSKLYCNRAAAYAback to top mRNA from alignment at Ecto-sp13_S_contig6189:359..6007+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6189.16894.1 ID=mRNA_Ecto-sp13_S_contig6189.16894.1|Name=mRNA_Ecto-sp13_S_contig6189.16894.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5649bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6189:359..6007+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6189:359..6007+ >mRNA_Ecto-sp13_S_contig6189.16894.1 ID=mRNA_Ecto-sp13_S_contig6189.16894.1|Name=mRNA_Ecto-sp13_S_contig6189.16894.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=783bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6189:359..6007+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |